RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 PDE8BO95263 885 aa16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 VIL1P09327 827 aaKnown RBP16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 EPHX2P34913 555 aa16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 PDE3AQ14432 1141 aa16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 GPRC5DQ9NZD1 345 aa16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 ZBTB12Q9Y330 459 aaPredicted RBP16.1■□□□□ 0.17
MTHFD1-208ENST00000554739 PNMA6EA0A0J9YXQ4 647 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 ATP8B2P98198 1209 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 C20orf194Q5TEA3 1177 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 DPF2Q92785 391 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 SIL1Q9H173 461 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 C1orf115Q9H7X2 142 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
MTHFD1-208ENST00000554739 USP17L3A6NCW0 530 aa16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 USP17L4A6NCW7 530 aa16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 IL15P40933 162 aaPredicted RBP16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 USP17L1Q7RTZ2 530 aa16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 PNMA8AQ86V59 439 aaPredicted RBP16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 CD209Q9NNX6 404 aa16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 SPEF2Q9C093 1822 aa16.08■□□□□ 0.16
MTHFD1-208ENST00000554739 IL1R1P14778 569 aa16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 FGFR2P21802 821 aa16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 RPS12P25398 132 aaKnown RBP16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 FSTL1Q12841 308 aa16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 DACT2Q5SW24 774 aa16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 RSBN1LQ6PCB5 846 aaPredicted RBP16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 FAM84BQ96KN1 310 aaPredicted RBP16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 GMLQ99445 158 aa16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 CNOT7Q9UIV1 285 aaKnown RBP16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 DDX19BQ9UMR2 479 aa16.07■□□□□ 0.16
MTHFD1-208ENST00000554739 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 GYG1P46976 350 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 POLA2Q14181 598 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 PUM3Q15397 648 aaKnown RBP16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 STRIP1Q5VSL9 837 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 ZNF804AQ7Z570 1209 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 SMC1BQ8NDV3 1235 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 SSH3Q8TE77 659 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 ADARB2Q9NS39 739 aaKnown RBP16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 ZBTB40Q9NUA8 1239 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
MTHFD1-208ENST00000554739 HIBADHP31937 336 aaKnown RBP16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 FBXO33Q7Z6M2 555 aa16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 LDHDQ86WU2 507 aa16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 MICALL2Q8IY33 904 aa16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 AGBL3Q8NEM8 1001 aa16.05■□□□□ 0.16
MTHFD1-208ENST00000554739 H7C1D1 291 aa16.04■□□□□ 0.16
MTHFD1-208ENST00000554739 SASH1O94885 1247 aa16.04■□□□□ 0.16
MTHFD1-208ENST00000554739 GTF2IP78347 998 aa16.04■□□□□ 0.16
MTHFD1-208ENST00000554739 CEP85Q6P2H3 762 aa16.04■□□□□ 0.16
MTHFD1-208ENST00000554739 TDRD7Q8NHU6 1098 aaKnown RBP16.04■□□□□ 0.16
MTHFD1-208ENST00000554739 LPIN2Q92539 896 aa16.04■□□□□ 0.16
MTHFD1-208ENST00000554739 MXD3Q9BW11 206 aa16.04■□□□□ 0.16
MTHFD1-208ENST00000554739 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
MTHFD1-208ENST00000554739 CHMP4BQ9H444 224 aaKnown RBP16.03■□□□□ 0.16
MTHFD1-208ENST00000554739 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
MTHFD1-208ENST00000554739 SCN4AP35499 1836 aa16.03■□□□□ 0.16
MTHFD1-208ENST00000554739 ZNF609O15014 1411 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 BCAMP50895 628 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 RRP1P56182 461 aaKnown RBP16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 ZNF280AP59817 542 aaPredicted RBP16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 TFCP2Q12800 502 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 G3BP1Q13283 466 aaKnown RBP eCLIP16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 CAVIN4Q5BKX8 364 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 SAMD7Q7Z3H4 446 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 FBXW7Q969H0 707 aa16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.02■□□□□ 0.16
MTHFD1-208ENST00000554739 SCN9AQ15858 1988 aa16.02■□□□□ 0.15
MTHFD1-208ENST00000554739 EGFRP00533 1210 aa16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 SLC5A1P13866 664 aa16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 VPS37DQ86XT2 251 aa16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 RPAP2Q8IXW5 612 aaPredicted RBP16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 CERS5Q8N5B7 392 aa16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 PGAP2Q9UHJ9 254 aa16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 CEP350Q5VT06 3117 aa16.01■□□□□ 0.15
MTHFD1-208ENST00000554739 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
MTHFD1-208ENST00000554739 MYO3BQ8WXR4 1341 aa16■□□□□ 0.15
MTHFD1-208ENST00000554739 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
MTHFD1-208ENST00000554739 ITGBL1O95965 494 aaPredicted RBP16■□□□□ 0.15
MTHFD1-208ENST00000554739 HSPA6P17066 643 aa16■□□□□ 0.15
MTHFD1-208ENST00000554739 TIMM10P62072 90 aa16■□□□□ 0.15
MTHFD1-208ENST00000554739 TBC1D10BQ4KMP7 808 aaPredicted RBP16■□□□□ 0.15
MTHFD1-208ENST00000554739 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
MTHFD1-208ENST00000554739 SIRT2Q8IXJ6 389 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms