RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 CITED4Q96RK1 184 aa8.88□□□□□ -0.99
ATXN3-225ENST00000554214 BIN2Q9UBW5 565 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-225ENST00000554214 LINC01387J3KSC0 135 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 NFKBIEO00221 500 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 EDN3P14138 238 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 PTPRAP18433 802 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 CDC25BP30305 580 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 NRG1Q02297 640 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-225ENST00000554214 ADAMTSL4Q6UY14 1074 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 OSMRQ99650 979 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 TRAIPQ9BWF2 469 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 SH2B1Q9NRF2 756 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-225ENST00000554214 USP21Q9UK80 565 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 AMOTL2Q9Y2J4 779 aa8.87□□□□□ -0.99
ATXN3-225ENST00000554214 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
ATXN3-225ENST00000554214 PDE2AO00408 941 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-225ENST00000554214 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-225ENST00000554214 DOC2BQ14184 412 aa8.86□□□□□ -0.99
ATXN3-225ENST00000554214 SETDB1Q15047 1291 aa8.86□□□□□ -0.99
ATXN3-225ENST00000554214 IGF2-ASQ6U949 168 aa8.86□□□□□ -0.99
ATXN3-225ENST00000554214 ADAM19Q9H013 955 aa8.86□□□□□ -0.99
ATXN3-225ENST00000554214 DLL1O00548 723 aa8.85□□□□□ -0.99
ATXN3-225ENST00000554214 NEFLP07196 543 aa8.85□□□□□ -0.99
ATXN3-225ENST00000554214 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
ATXN3-225ENST00000554214 MAP4K3Q8IVH8 894 aa8.85□□□□□ -0.99
ATXN3-225ENST00000554214 HHIPQ96QV1 700 aa8.85□□□□□ -0.99
ATXN3-225ENST00000554214 KCNA1Q09470 495 aa8.84□□□□□ -0.99
ATXN3-225ENST00000554214 MBTPS1Q14703 1052 aa8.84□□□□□ -0.99
ATXN3-225ENST00000554214 TXNDC11Q6PKC3 985 aa8.84□□□□□ -0.99
ATXN3-225ENST00000554214 TMEM102Q8N9M5 508 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-225ENST00000554214 NXPE3Q969Y0 559 aa8.84□□□□□ -0.99
ATXN3-225ENST00000554214 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
ATXN3-225ENST00000554214 ZKSCAN3Q9BRR0 538 aa8.84□□□□□ -0.99
ATXN3-225ENST00000554214 SRA1Q9HD15 236 aaKnown RBP8.84□□□□□ -0.99
ATXN3-225ENST00000554214 FURINP09958 794 aa8.83□□□□□ -1
ATXN3-225ENST00000554214 FAM117BQ6P1L5 589 aa8.83□□□□□ -1
ATXN3-225ENST00000554214 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
ATXN3-225ENST00000554214 LATS2Q9NRM7 1088 aa8.83□□□□□ -1
ATXN3-225ENST00000554214 IVNS1ABPQ9Y6Y0 642 aa8.83□□□□□ -1
ATXN3-225ENST00000554214 EPHA1P21709 976 aa8.82□□□□□ -1
ATXN3-225ENST00000554214 PEAR1Q5VY43 1037 aaPredicted RBP8.82□□□□□ -1
ATXN3-225ENST00000554214 USPL1Q5W0Q7 1092 aa8.82□□□□□ -1
ATXN3-225ENST00000554214 RBCK1Q9BYM8 510 aa8.82□□□□□ -1
ATXN3-225ENST00000554214 FSCN2O14926 492 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 CABP4P57796 275 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 ORC1Q13415 861 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 GALNT12Q8IXK2 581 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 GALNT11Q8NCW6 608 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 DCAF11Q8TEB1 546 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 WFDC12Q8WWY7 111 aa8.81□□□□□ -1
ATXN3-225ENST00000554214 CPNE3O75131 537 aaKnown RBP8.8□□□□□ -1
ATXN3-225ENST00000554214 IREB2P48200 963 aaKnown RBP8.8□□□□□ -1
ATXN3-225ENST00000554214 ASAP3Q8TDY4 903 aa8.8□□□□□ -1
ATXN3-225ENST00000554214 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
ATXN3-225ENST00000554214 TPSG1Q9NRR2 321 aa8.8□□□□□ -1
ATXN3-225ENST00000554214 DCTN4Q9UJW0 460 aa8.8□□□□□ -1
ATXN3-225ENST00000554214 A0A1W2PP55 124 aa8.79□□□□□ -1
ATXN3-225ENST00000554214 GPR182O15218 404 aa8.79□□□□□ -1
ATXN3-225ENST00000554214 IGHA2P01877 340 aa8.79□□□□□ -1
ATXN3-225ENST00000554214 CD68P34810 354 aaPredicted RBP8.79□□□□□ -1
ATXN3-225ENST00000554214 KLHL23Q8NBE8 558 aa8.79□□□□□ -1
ATXN3-225ENST00000554214 BSNDQ8WZ55 320 aa8.79□□□□□ -1
ATXN3-225ENST00000554214 DMRTB1Q96MA1 342 aa8.79□□□□□ -1
ATXN3-225ENST00000554214 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
ATXN3-225ENST00000554214 H3BRJ5 948 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
ATXN3-225ENST00000554214 ALX3O95076 343 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 PDIA4P13667 645 aaKnown RBP8.78□□□□□ -1
ATXN3-225ENST00000554214 NOS3P29474 1203 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 TMC7Q7Z402 723 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 SEC31BQ9NQW1 1179 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 SOX13Q9UN79 622 aa8.78□□□□□ -1
ATXN3-225ENST00000554214 MAPK1P28482 360 aa8.77□□□□□ -1.01
ATXN3-225ENST00000554214 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
ATXN3-225ENST00000554214 SLC7A3Q8WY07 619 aa8.77□□□□□ -1.01
ATXN3-225ENST00000554214 BHLHE41Q9C0J9 482 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-225ENST00000554214 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
ATXN3-225ENST00000554214 AKTIPQ9H8T0 292 aa8.77□□□□□ -1.01
ATXN3-225ENST00000554214 KCNK4Q9NYG8 393 aa8.77□□□□□ -1.01
ATXN3-225ENST00000554214 K7ELQ4 463 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-225ENST00000554214 TM4SF5O14894 197 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
ATXN3-225ENST00000554214 ADAM23O75077 832 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 PIP4K2BP78356 416 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 PLCB3Q01970 1234 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 KIAA0319Q5VV43 1072 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 VN1R5Q7Z5H4 357 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 WNT8BQ93098 351 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 CSRNP1Q96S65 589 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 LIN7BQ9HAP6 207 aa8.76□□□□□ -1.01
ATXN3-225ENST00000554214 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
ATXN3-225ENST00000554214 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
ATXN3-225ENST00000554214 F8W735 103 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-225ENST00000554214 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-225ENST00000554214 ARL4DP49703 201 aa8.75□□□□□ -1.01
ATXN3-225ENST00000554214 IKBKEQ14164 716 aa8.75□□□□□ -1.01
ATXN3-225ENST00000554214 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms