RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
ATL1-203ENST00000553509 ZNF804AQ7Z570 1209 aa16.52■□□□□ 0.24
ATL1-203ENST00000553509 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
ATL1-203ENST00000553509 PA2G4Q9UQ80 394 aaKnown RBP16.52■□□□□ 0.24
ATL1-203ENST00000553509 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.24
ATL1-203ENST00000553509 IFIT1P09914 478 aaKnown RBP16.51■□□□□ 0.23
ATL1-203ENST00000553509 G3BP1Q13283 466 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATL1-203ENST00000553509 DOK7Q18PE1 504 aa16.51■□□□□ 0.23
ATL1-203ENST00000553509 ATG9AQ7Z3C6 839 aa16.51■□□□□ 0.23
ATL1-203ENST00000553509 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
ATL1-203ENST00000553509 IQCA1LA6NCM1 817 aa16.5■□□□□ 0.23
ATL1-203ENST00000553509 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
ATL1-203ENST00000553509 SLC5A1P13866 664 aa16.5■□□□□ 0.23
ATL1-203ENST00000553509 CXCL9Q07325 125 aa16.5■□□□□ 0.23
ATL1-203ENST00000553509 OS9Q13438 667 aaPredicted RBP16.5■□□□□ 0.23
ATL1-203ENST00000553509 L3MBTL3Q96JM7 780 aaPredicted RBP16.5■□□□□ 0.23
ATL1-203ENST00000553509 AKAP2Q9Y2D5 859 aa16.5■□□□□ 0.23
ATL1-203ENST00000553509 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
ATL1-203ENST00000553509 YDJCA8MPS7 323 aa16.49■□□□□ 0.23
ATL1-203ENST00000553509 RAD17O75943 681 aa16.49■□□□□ 0.23
ATL1-203ENST00000553509 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
ATL1-203ENST00000553509 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
ATL1-203ENST00000553509 AAMPQ13685 434 aa16.49■□□□□ 0.23
ATL1-203ENST00000553509 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
ATL1-203ENST00000553509 CAVIN4Q5BKX8 364 aa16.49■□□□□ 0.23
ATL1-203ENST00000553509 LPIN2Q92539 896 aa16.49■□□□□ 0.23
ATL1-203ENST00000553509 IRS2Q9Y4H2 1338 aa16.48■□□□□ 0.23
ATL1-203ENST00000553509 ZNF646O15015 1829 aaPredicted RBP16.48■□□□□ 0.23
ATL1-203ENST00000553509 SURF6O75683 361 aaKnown RBP16.48■□□□□ 0.23
ATL1-203ENST00000553509 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
ATL1-203ENST00000553509 TXNRD3Q86VQ6 643 aa16.48■□□□□ 0.23
ATL1-203ENST00000553509 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
ATL1-203ENST00000553509 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
ATL1-203ENST00000553509 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
ATL1-203ENST00000553509 ZNF609O15014 1411 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 WTIPA6NIX2 430 aaPredicted RBP16.47■□□□□ 0.23
ATL1-203ENST00000553509 SNAP23O00161 211 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 FGFR2P21802 821 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 RPS12P25398 132 aaKnown RBP16.47■□□□□ 0.23
ATL1-203ENST00000553509 KLRK1P26718 216 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 HIBADHP31937 336 aaKnown RBP16.47■□□□□ 0.23
ATL1-203ENST00000553509 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 C16orf71Q8IYS4 520 aaPredicted RBP16.47■□□□□ 0.23
ATL1-203ENST00000553509 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 NMRK2Q9NPI5 230 aa16.47■□□□□ 0.23
ATL1-203ENST00000553509 PSMD14O00487 310 aa16.46■□□□□ 0.23
ATL1-203ENST00000553509 IL1R1P14778 569 aa16.46■□□□□ 0.23
ATL1-203ENST00000553509 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
ATL1-203ENST00000553509 RRAGCQ9HB90 399 aa16.46■□□□□ 0.23
ATL1-203ENST00000553509 HACL1Q9UJ83 578 aa16.46■□□□□ 0.23
ATL1-203ENST00000553509 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
ATL1-203ENST00000553509 VIL1P09327 827 aaKnown RBP16.45■□□□□ 0.22
ATL1-203ENST00000553509 TFCP2Q12800 502 aa16.45■□□□□ 0.22
ATL1-203ENST00000553509 STRIP1Q5VSL9 837 aa16.45■□□□□ 0.22
ATL1-203ENST00000553509 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
ATL1-203ENST00000553509 DPF2Q92785 391 aa16.45■□□□□ 0.22
ATL1-203ENST00000553509 GYG1P46976 350 aa16.44■□□□□ 0.22
ATL1-203ENST00000553509 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
ATL1-203ENST00000553509 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
ATL1-203ENST00000553509 FAM84BQ96KN1 310 aaPredicted RBP16.44■□□□□ 0.22
ATL1-203ENST00000553509 GPR108Q9NPR9 543 aa16.44■□□□□ 0.22
ATL1-203ENST00000553509 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
ATL1-203ENST00000553509 KIF3CO14782 793 aa16.43■□□□□ 0.22
ATL1-203ENST00000553509 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
ATL1-203ENST00000553509 GMPSP49915 693 aaPredicted RBP16.43■□□□□ 0.22
ATL1-203ENST00000553509 MMP14P50281 582 aa16.43■□□□□ 0.22
ATL1-203ENST00000553509 SCNN1DP51172 638 aa16.43■□□□□ 0.22
ATL1-203ENST00000553509 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
ATL1-203ENST00000553509 FBXO33Q7Z6M2 555 aa16.43■□□□□ 0.22
ATL1-203ENST00000553509 TDRD7Q8NHU6 1098 aaKnown RBP16.43■□□□□ 0.22
ATL1-203ENST00000553509 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
ATL1-203ENST00000553509 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
ATL1-203ENST00000553509 A0A1B0GUL7 405 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 H7C1D1 291 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 SASH1O94885 1247 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 EPHX2P34913 555 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
ATL1-203ENST00000553509 SIRT2Q8IXJ6 389 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 TAF1DQ9H5J8 278 aaPredicted RBP16.42■□□□□ 0.22
ATL1-203ENST00000553509 KCNQ5Q9NR82 932 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
ATL1-203ENST00000553509 POTECB2RU33 542 aa16.41■□□□□ 0.22
ATL1-203ENST00000553509 TOMM70O94826 608 aa16.41■□□□□ 0.22
ATL1-203ENST00000553509 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
ATL1-203ENST00000553509 GTF2IP78347 998 aa16.41■□□□□ 0.22
ATL1-203ENST00000553509 DACT2Q5SW24 774 aa16.41■□□□□ 0.22
ATL1-203ENST00000553509 GORABQ5T7V8 394 aa16.41■□□□□ 0.22
ATL1-203ENST00000553509 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
ATL1-203ENST00000553509 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
ATL1-203ENST00000553509 FAM205AQ6ZU69 1335 aa16.41■□□□□ 0.22
ATL1-203ENST00000553509 SEMA3EO15041 775 aa16.4■□□□□ 0.22
ATL1-203ENST00000553509 BCAMP50895 628 aa16.4■□□□□ 0.22
ATL1-203ENST00000553509 C1QTNF8P60827 252 aa16.4■□□□□ 0.22
ATL1-203ENST00000553509 TNNI3KQ59H18 835 aa16.4■□□□□ 0.22
ATL1-203ENST00000553509 TBC1D22AQ8WUA7 517 aa16.4■□□□□ 0.22
ATL1-203ENST00000553509 NEUROD6Q96NK8 337 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms