RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 UBE3BQ7Z3V4 1068 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-221ENST00000553498 EVI5LQ96CN4 794 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 AK7Q96M32 723 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 IL1RAPL2Q9NP60 686 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 ASAP1Q9ULH1 1129 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 UBR2Q8IWV8 1755 aa8.88□□□□□ -0.99
ATXN3-221ENST00000553498 MAP3K15Q6ZN16 1313 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 CDHR2Q9BYE9 1310 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 ACTN4O43707 911 aaKnown RBP8.87□□□□□ -0.99
ATXN3-221ENST00000553498 CIAO1O76071 339 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-221ENST00000553498 CFHP08603 1231 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 RFX5P48382 616 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-221ENST00000553498 PTPN12Q05209 780 aaKnown RBP8.87□□□□□ -0.99
ATXN3-221ENST00000553498 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
ATXN3-221ENST00000553498 TTLL7Q6ZT98 887 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 DNAJC10Q8IXB1 793 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 KIF2CQ99661 725 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 C5P01031 1676 aa8.87□□□□□ -0.99
ATXN3-221ENST00000553498 RFX7Q2KHR2 1363 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 RAD50Q92878 1312 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 PHLPP1O60346 1717 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 A0A0G2JS52 829 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 SASH1O94885 1247 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 IL15P40933 162 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-221ENST00000553498 PIP4K2BP78356 416 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 FOXO4P98177 505 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 AACSQ86V21 672 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 NUTM1Q86Y26 1132 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 ZBTB38Q8NAP3 1195 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-221ENST00000553498 RILPL2Q969X0 211 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 ANTXR1Q9H6X2 564 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 CHMP5Q9NZZ3 219 aa8.86□□□□□ -0.99
ATXN3-221ENST00000553498 SHANK3Q9BYB0 1731 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 NWD2Q9ULI1 1742 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 ATP5J2-PTCD1G3V325 749 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 K7ELQ4 463 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-221ENST00000553498 ATP5JP18859 108 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 HMGB2P26583 209 aaKnown RBP8.85□□□□□ -0.99
ATXN3-221ENST00000553498 LMBR1LQ6UX01 489 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 KIAA1211Q6ZU35 1233 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
ATXN3-221ENST00000553498 PRR14Q9BWN1 585 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 ZBTB3Q9H5J0 574 aa8.85□□□□□ -0.99
ATXN3-221ENST00000553498 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 SGSM2O43147 1006 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 CSF1RP07333 972 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 PARP10Q53GL7 1025 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 TNNI3KQ59H18 835 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 EPHA10Q5JZY3 1008 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 NRAPQ86VF7 1730 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 KRI1Q8N9T8 703 aaKnown RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 MARCH10Q8NA82 808 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 SYTL4Q96C24 671 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 EAF2Q96CJ1 260 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 NGLY1Q96IV0 654 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 CWC22Q9HCG8 908 aaKnown RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 SNRKQ9NRH2 765 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 DIAPH3Q9NSV4 1193 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 PA2G4Q9UQ80 394 aaKnown RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 AKAP2Q9Y2D5 859 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 CCDC9Q9Y3X0 531 aaKnown RBP8.84□□□□□ -0.99
ATXN3-221ENST00000553498 FPGT-TNNI3KV9GXZ4 949 aa8.84□□□□□ -0.99
ATXN3-221ENST00000553498 EYA2O00167 538 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 PTMSP20962 102 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 GCGRP47871 477 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 PIP4K2AP48426 406 aaPredicted RBP8.83□□□□□ -1
ATXN3-221ENST00000553498 EIF5P55010 431 aaKnown RBP8.83□□□□□ -1
ATXN3-221ENST00000553498 CCDC57Q2TAC2 916 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 LRRFIP1Q32MZ4 808 aaKnown RBP8.83□□□□□ -1
ATXN3-221ENST00000553498 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 ANO2Q9NQ90 1003 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 CCDC87Q9NVE4 849 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 PCDHB3Q9Y5E6 796 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 BCL9LQ86UU0 1499 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
ATXN3-221ENST00000553498 LOC102724428A0A0B4J2F2 783 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 HSP90AA1P07900 732 aaKnown RBP8.82□□□□□ -1
ATXN3-221ENST00000553498 CD46P15529 392 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 HSPA4P34932 840 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 DDIT3P35638 169 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 SIK1P57059 783 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 COPS2P61201 443 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 NFKBIBQ15653 356 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 TSHZ3Q63HK5 1081 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 CLEC4GQ6UXB4 293 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 NLRP10Q86W26 655 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
ATXN3-221ENST00000553498 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 BCL11AQ9H165 835 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 ZNF652Q9Y2D9 606 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms