RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 LAS1LQ9Y4W2 734 aaKnown RBP11.08□□□□□ -0.64
CDK4-213ENST00000552713 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
CDK4-213ENST00000552713 TRIM28Q13263 835 aaKnown RBP11.07□□□□□ -0.64
CDK4-213ENST00000552713 CCDC146Q8IYE0 955 aa11.07□□□□□ -0.64
CDK4-213ENST00000552713 FZD1Q9UP38 647 aa11.07□□□□□ -0.64
CDK4-213ENST00000552713 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
CDK4-213ENST00000552713 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
CDK4-213ENST00000552713 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
CDK4-213ENST00000552713 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
CDK4-213ENST00000552713 PTPN12Q05209 780 aaKnown RBP11.06□□□□□ -0.64
CDK4-213ENST00000552713 PRKG1Q13976 671 aa11.06□□□□□ -0.64
CDK4-213ENST00000552713 TTLL12Q14166 644 aaPredicted RBP11.06□□□□□ -0.64
CDK4-213ENST00000552713 HABP4Q5JVS0 413 aaKnown RBP11.06□□□□□ -0.64
CDK4-213ENST00000552713 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
CDK4-213ENST00000552713 ZBTB38Q8NAP3 1195 aaPredicted RBP11.06□□□□□ -0.64
CDK4-213ENST00000552713 DBF4Q9UBU7 674 aaPredicted RBP11.06□□□□□ -0.64
CDK4-213ENST00000552713 WNT10BO00744 389 aa11.05□□□□□ -0.64
CDK4-213ENST00000552713 FKTNO75072 461 aa11.05□□□□□ -0.64
CDK4-213ENST00000552713 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
CDK4-213ENST00000552713 DUSP27Q5VZP5 1158 aa11.05□□□□□ -0.64
CDK4-213ENST00000552713 MYD88Q99836 296 aa11.05□□□□□ -0.64
CDK4-213ENST00000552713 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
CDK4-213ENST00000552713 XDHP47989 1333 aa11.05□□□□□ -0.64
CDK4-213ENST00000552713 MKI67P46013 3256 aaKnown RBP11.04□□□□□ -0.64
CDK4-213ENST00000552713 SASH1O94885 1247 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 DACT2Q5SW24 774 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 TXNRD3Q86VQ6 643 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 CFHR5Q9BXR6 569 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 HYPKQ9NX55 129 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 OTOFQ9HC10 1997 aa11.04□□□□□ -0.64
CDK4-213ENST00000552713 PDE8AO60658 829 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 PCCAP05165 728 aaPredicted RBP11.03□□□□□ -0.64
CDK4-213ENST00000552713 HOXB7P09629 217 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 ATP2B4P23634 1241 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 CAP1Q01518 475 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 CCDC152Q4G0S7 254 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 SPRYD7Q5W111 196 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 ANKRD18AQ8IVF6 992 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
CDK4-213ENST00000552713 A0A1B0GUL6 1792 aa11.03□□□□□ -0.64
CDK4-213ENST00000552713 ZSWIM8A7E2V4 1837 aa11.02□□□□□ -0.64
CDK4-213ENST00000552713 KLRK1P26718 216 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 SREBF2Q12772 1141 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 LDLRAD1Q5T700 205 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 OTOP1Q7RTM1 612 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 GCC1Q96CN9 775 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 MBIPQ9NS73 344 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 MINPP1Q9UNW1 487 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 TRIM17Q9Y577 477 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 SSC5DA1L4H1 1573 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 HTTP42858 3142 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 MED23Q9ULK4 1368 aa11.02□□□□□ -0.65
CDK4-213ENST00000552713 IGF2BP3O00425 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDK4-213ENST00000552713 ELL2O00472 640 aaPredicted RBP11.01□□□□□ -0.65
CDK4-213ENST00000552713 NF2P35240 595 aa11.01□□□□□ -0.65
CDK4-213ENST00000552713 ARMC9Q7Z3E5 817 aa11.01□□□□□ -0.65
CDK4-213ENST00000552713 IFNL1Q8IU54 200 aa11.01□□□□□ -0.65
CDK4-213ENST00000552713 CCDC191Q8NCU4 936 aa11.01□□□□□ -0.65
CDK4-213ENST00000552713 ZBED3Q96IU2 234 aaPredicted RBP11.01□□□□□ -0.65
CDK4-213ENST00000552713 CLMNQ96JQ2 1002 aa11.01□□□□□ -0.65
CDK4-213ENST00000552713 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
CDK4-213ENST00000552713 PCDHAC2Q9Y5I4 1007 aa11.01□□□□□ -0.65
CDK4-213ENST00000552713 TRIOBPQ9H2D6 2365 aa11.01□□□□□ -0.65
CDK4-213ENST00000552713 EN2P19622 333 aaPredicted RBP11□□□□□ -0.65
CDK4-213ENST00000552713 CCT4P50991 539 aaKnown RBP11□□□□□ -0.65
CDK4-213ENST00000552713 FXR1P51114 621 aaKnown RBP eCLIP11□□□□□ -0.65
CDK4-213ENST00000552713 GOLGA2Q08379 1002 aa11□□□□□ -0.65
CDK4-213ENST00000552713 STRIP1Q5VSL9 837 aa11□□□□□ -0.65
CDK4-213ENST00000552713 KIAA0825Q8IV33 1275 aa11□□□□□ -0.65
CDK4-213ENST00000552713 GREM2Q9H772 168 aa11□□□□□ -0.65
CDK4-213ENST00000552713 CWC25Q9NXE8 425 aaPredicted RBP11□□□□□ -0.65
CDK4-213ENST00000552713 CENPFP49454 3210 aa11□□□□□ -0.65
CDK4-213ENST00000552713 CEP290O15078 2479 aa11□□□□□ -0.65
CDK4-213ENST00000552713 GJA5P36382 358 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 CTSWP56202 376 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 OGFOD1Q8N543 542 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 WNK4Q96J92 1243 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 METTL22Q9BUU2 404 aaPredicted RBP10.99□□□□□ -0.65
CDK4-213ENST00000552713 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
CDK4-213ENST00000552713 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 AOX1Q06278 1338 aa10.99□□□□□ -0.65
CDK4-213ENST00000552713 IGKV5-2P06315 115 aa10.98□□□□□ -0.65
CDK4-213ENST00000552713 ZNF853P0CG23 659 aa10.98□□□□□ -0.65
CDK4-213ENST00000552713 HSP90B1P14625 803 aaKnown RBP10.98□□□□□ -0.65
CDK4-213ENST00000552713 TTLL5Q6EMB2 1281 aa10.98□□□□□ -0.65
CDK4-213ENST00000552713 APOBEC3FQ8IUX4 373 aaKnown RBP10.98□□□□□ -0.65
CDK4-213ENST00000552713 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
CDK4-213ENST00000552713 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
CDK4-213ENST00000552713 CDC5LQ99459 802 aaKnown RBP10.98□□□□□ -0.65
CDK4-213ENST00000552713 COA1Q9GZY4 146 aa10.98□□□□□ -0.65
CDK4-213ENST00000552713 MYO3BQ8WXR4 1341 aa10.98□□□□□ -0.65
CDK4-213ENST00000552713 BRCA2P51587 3418 aa10.97□□□□□ -0.65
CDK4-213ENST00000552713 MANSC4A6NHS7 340 aaPredicted RBP10.97□□□□□ -0.65
CDK4-213ENST00000552713 SNAP23O00161 211 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms