RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PDE8BO95263 885 aa17.08■□□□□ 0.32
TROAP-213ENST00000550709 EPS15P42566 896 aa17.08■□□□□ 0.32
TROAP-213ENST00000550709 SCNN1DP51172 638 aa17.08■□□□□ 0.32
TROAP-213ENST00000550709 RRP1P56182 461 aaKnown RBP17.08■□□□□ 0.32
TROAP-213ENST00000550709 ATP8B2P98198 1209 aa17.08■□□□□ 0.32
TROAP-213ENST00000550709 PODNQ7Z5L7 613 aa17.08■□□□□ 0.32
TROAP-213ENST00000550709 TAF1DQ9H5J8 278 aaPredicted RBP17.08■□□□□ 0.32
TROAP-213ENST00000550709 CEP126Q9P2H0 1117 aa17.08■□□□□ 0.32
TROAP-213ENST00000550709 USP17L3A6NCW0 530 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 USP17L4A6NCW7 530 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 TOMM70O94826 608 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 GYG1P46976 350 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 EAPPQ56P03 285 aaPredicted RBP17.07■□□□□ 0.32
TROAP-213ENST00000550709 USP17L1Q7RTZ2 530 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 ZNF804AQ7Z570 1209 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 VGLL2Q8N8G2 317 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 CD209Q9NNX6 404 aa17.07■□□□□ 0.32
TROAP-213ENST00000550709 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 SHTN1A0MZ66 631 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 EPHX2P34913 555 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 IL15P40933 162 aaPredicted RBP17.06■□□□□ 0.32
TROAP-213ENST00000550709 PUM3Q15397 648 aaKnown RBP17.06■□□□□ 0.32
TROAP-213ENST00000550709 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
TROAP-213ENST00000550709 MXD3Q9BW11 206 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 GPRC5DQ9NZD1 345 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 LTBP1Q14766 1721 aa17.06■□□□□ 0.32
TROAP-213ENST00000550709 VIL1P09327 827 aaKnown RBP17.05■□□□□ 0.32
TROAP-213ENST00000550709 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
TROAP-213ENST00000550709 POTEIP0CG38 1075 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 POTEJP0CG39 1038 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 HIBADHP31937 336 aaKnown RBP17.05■□□□□ 0.32
TROAP-213ENST00000550709 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 GTF2IP78347 998 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
TROAP-213ENST00000550709 POLA2Q14181 598 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
TROAP-213ENST00000550709 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
TROAP-213ENST00000550709 JAG2Q9Y219 1238 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
TROAP-213ENST00000550709 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
TROAP-213ENST00000550709 TFCP2Q12800 502 aa17.04■□□□□ 0.32
TROAP-213ENST00000550709 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
TROAP-213ENST00000550709 ATP2B3Q16720 1220 aa17.04■□□□□ 0.32
TROAP-213ENST00000550709 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
TROAP-213ENST00000550709 RSBN1LQ6PCB5 846 aaPredicted RBP17.04■□□□□ 0.32
TROAP-213ENST00000550709 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
TROAP-213ENST00000550709 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
TROAP-213ENST00000550709 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
TROAP-213ENST00000550709 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
TROAP-213ENST00000550709 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
TROAP-213ENST00000550709 H7C1D1 291 aa17.03■□□□□ 0.32
TROAP-213ENST00000550709 SLC5A1P13866 664 aa17.03■□□□□ 0.32
TROAP-213ENST00000550709 FGFR2P21802 821 aa17.03■□□□□ 0.32
TROAP-213ENST00000550709 BCAMP50895 628 aa17.03■□□□□ 0.32
TROAP-213ENST00000550709 CAVIN4Q5BKX8 364 aa17.03■□□□□ 0.32
TROAP-213ENST00000550709 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
TROAP-213ENST00000550709 LPIN2Q92539 896 aa17.03■□□□□ 0.32
TROAP-213ENST00000550709 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
TROAP-213ENST00000550709 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
TROAP-213ENST00000550709 DACT2Q5SW24 774 aa17.02■□□□□ 0.32
TROAP-213ENST00000550709 RBM26Q5T8P6 1007 aaKnown RBP17.02■□□□□ 0.32
TROAP-213ENST00000550709 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.32
TROAP-213ENST00000550709 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
TROAP-213ENST00000550709 DPF2Q92785 391 aa17.02■□□□□ 0.32
TROAP-213ENST00000550709 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
TROAP-213ENST00000550709 IL1R1P14778 569 aa17.01■□□□□ 0.31
TROAP-213ENST00000550709 TIMM10P62072 90 aa17.01■□□□□ 0.31
TROAP-213ENST00000550709 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
TROAP-213ENST00000550709 PNMA8AQ86V59 439 aaPredicted RBP17.01■□□□□ 0.31
TROAP-213ENST00000550709 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
TROAP-213ENST00000550709 ADARB2Q9NS39 739 aaKnown RBP17.01■□□□□ 0.31
TROAP-213ENST00000550709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
TROAP-213ENST00000550709 ADORA1P30542 326 aa17■□□□□ 0.31
TROAP-213ENST00000550709 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
TROAP-213ENST00000550709 TBC1D10BQ4KMP7 808 aaPredicted RBP17■□□□□ 0.31
TROAP-213ENST00000550709 LDHDQ86WU2 507 aa17■□□□□ 0.31
TROAP-213ENST00000550709 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
TROAP-213ENST00000550709 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
TROAP-213ENST00000550709 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
TROAP-213ENST00000550709 WDR90Q96KV7 1748 aa17■□□□□ 0.31
TROAP-213ENST00000550709 GMLQ99445 158 aa17■□□□□ 0.31
TROAP-213ENST00000550709 SASH1O94885 1247 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 CHADLQ6NUI6 762 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 USP50Q70EL3 339 aaPredicted RBP16.99■□□□□ 0.31
TROAP-213ENST00000550709 SIRT2Q8IXJ6 389 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 RPAP2Q8IXW5 612 aaPredicted RBP16.99■□□□□ 0.31
TROAP-213ENST00000550709 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
TROAP-213ENST00000550709 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
TROAP-213ENST00000550709 A0A1B0GUL7 405 aa16.98■□□□□ 0.31
TROAP-213ENST00000550709 F8W031 263 aaPredicted RBP16.98■□□□□ 0.31
TROAP-213ENST00000550709 HMMRO75330 724 aa16.98■□□□□ 0.31
TROAP-213ENST00000550709 EGFRP00533 1210 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms