RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 SALL1Q9NSC2 1324 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 IGSF3O75054 1194 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 KCNJ6P48051 423 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 EXOSC10Q01780 885 aaKnown RBP17.53■□□□□ 0.4
PDE1B-207ENST00000550620 ADALQ6DHV7 355 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 XAGE3Q8WTP9 111 aa17.53■□□□□ 0.4
PDE1B-207ENST00000550620 ZNF274Q96GC6 653 aaPredicted RBP17.53■□□□□ 0.4
PDE1B-207ENST00000550620 PALLDQ8WX93 1383 aa17.52■□□□□ 0.4
PDE1B-207ENST00000550620 FAM193AP78312 1265 aa17.52■□□□□ 0.4
PDE1B-207ENST00000550620 RABL6Q3YEC7 729 aaPredicted RBP17.52■□□□□ 0.4
PDE1B-207ENST00000550620 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
PDE1B-207ENST00000550620 FMR1NBQ8N0W7 255 aaPredicted RBP17.52■□□□□ 0.4
PDE1B-207ENST00000550620 DBNDD2Q9BQY9 259 aa17.52■□□□□ 0.4
PDE1B-207ENST00000550620 RTEL1Q9NZ71 1219 aa17.52■□□□□ 0.4
PDE1B-207ENST00000550620 PSDA5PKW4 1024 aaPredicted RBP17.52■□□□□ 0.39
PDE1B-207ENST00000550620 SLFN14P0C7P3 912 aa17.52■□□□□ 0.39
PDE1B-207ENST00000550620 MYL6BP14649 208 aa17.52■□□□□ 0.39
PDE1B-207ENST00000550620 ELF2Q15723 593 aa17.52■□□□□ 0.39
PDE1B-207ENST00000550620 CCT2P78371 535 aaKnown RBP17.51■□□□□ 0.39
PDE1B-207ENST00000550620 TERF2Q15554 542 aa17.51■□□□□ 0.39
PDE1B-207ENST00000550620 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
PDE1B-207ENST00000550620 FBXO38Q6PIJ6 1188 aa17.51■□□□□ 0.39
PDE1B-207ENST00000550620 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
PDE1B-207ENST00000550620 ANKRD24Q8TF21 1146 aa17.51■□□□□ 0.39
PDE1B-207ENST00000550620 FAM53CQ9NYF3 392 aa17.51■□□□□ 0.39
PDE1B-207ENST00000550620 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
PDE1B-207ENST00000550620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
PDE1B-207ENST00000550620 NBPF11Q86T75 865 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 CREBRFQ8IUR6 639 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 L2HGDHQ9H9P8 463 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
PDE1B-207ENST00000550620 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 CCP110O43303 1012 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 SMC2O95347 1197 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 SFPQP23246 707 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDE1B-207ENST00000550620 SF3A1Q15459 793 aaKnown RBP17.5■□□□□ 0.39
PDE1B-207ENST00000550620 ANKRD13DQ6ZTN6 518 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 ARHGEF25Q86VW2 580 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
PDE1B-207ENST00000550620 CCDC66A2RUB6 948 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 E7EWF7 191 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 PDIA3P30101 505 aaKnown RBP17.49■□□□□ 0.39
PDE1B-207ENST00000550620 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDE1B-207ENST00000550620 V9GYY5 206 aaPredicted RBP17.49■□□□□ 0.39
PDE1B-207ENST00000550620 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
PDE1B-207ENST00000550620 RGPD2P0DJD1 1756 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 ABCC6O95255 1503 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 GCP02774 474 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 STK38Q15208 465 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 ILDR1Q86SU0 546 aaPredicted RBP17.49■□□□□ 0.39
PDE1B-207ENST00000550620 PPP1R13BQ96KQ4 1090 aa17.49■□□□□ 0.39
PDE1B-207ENST00000550620 A0A087WWV3 80 aa17.48■□□□□ 0.39
PDE1B-207ENST00000550620 YEATS4O95619 227 aa17.48■□□□□ 0.39
PDE1B-207ENST00000550620 CHGBP05060 677 aa17.48■□□□□ 0.39
PDE1B-207ENST00000550620 GUCY1B3Q02153 619 aa17.48■□□□□ 0.39
PDE1B-207ENST00000550620 E4F1Q66K89 784 aaPredicted RBP17.48■□□□□ 0.39
PDE1B-207ENST00000550620 TMC6Q7Z403 805 aa17.48■□□□□ 0.39
PDE1B-207ENST00000550620 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
PDE1B-207ENST00000550620 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
PDE1B-207ENST00000550620 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
PDE1B-207ENST00000550620 BMS1Q14692 1282 aaKnown RBP17.47■□□□□ 0.39
PDE1B-207ENST00000550620 ESCO1Q5FWF5 840 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 ZMYM1Q5SVZ6 1142 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 FBXL16Q8N461 479 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 XPO4Q9C0E2 1151 aaKnown RBP17.47■□□□□ 0.39
PDE1B-207ENST00000550620 A0A1B0GVL5 298 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 NDUFA8P51970 172 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 POLR3EQ9NVU0 708 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 IFNKQ9P0W0 207 aa17.47■□□□□ 0.39
PDE1B-207ENST00000550620 GOLIM4O00461 696 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 DHX16O60231 1041 aaKnown RBP17.46■□□□□ 0.39
PDE1B-207ENST00000550620 NLRP12P59046 1061 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 DPCR1Q3MIW9 517 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 BRAPQ7Z569 592 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
PDE1B-207ENST00000550620 GPR108Q9NPR9 543 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 ERBB3P21860 1342 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 SLIT3O75094 1523 aa17.46■□□□□ 0.39
PDE1B-207ENST00000550620 SLC3A2P08195 630 aaKnown RBP17.46■□□□□ 0.39
PDE1B-207ENST00000550620 HSPD1P10809 573 aaKnown RBP17.46■□□□□ 0.39
PDE1B-207ENST00000550620 ERCC4Q92889 916 aaPredicted RBP17.46■□□□□ 0.39
PDE1B-207ENST00000550620 SPTLC2O15270 562 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 H2AFXP16104 143 aaPredicted RBP17.45■□□□□ 0.38
PDE1B-207ENST00000550620 EVCP57679 992 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 SLC39A6Q13433 755 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 ARMCX5Q6P1M9 558 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 C8orf76Q96K31 380 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 A0A087WZG4 1122 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 CCDC93Q567U6 631 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 SYT10Q6XYQ8 523 aa17.45■□□□□ 0.38
PDE1B-207ENST00000550620 IKBKBO14920 756 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms