RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PODXL2Q9NZ53 605 aa13.01□□□□□ -0.33
DDB1-221ENST00000543162 GGA1Q9UJY5 639 aa13.01□□□□□ -0.33
DDB1-221ENST00000543162 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
DDB1-221ENST00000543162 UFL1O94874 794 aa13□□□□□ -0.33
DDB1-221ENST00000543162 MAP4K4O95819 1239 aaPredicted RBP13□□□□□ -0.33
DDB1-221ENST00000543162 UQCRFS1P1P0C7P4 283 aa13□□□□□ -0.33
DDB1-221ENST00000543162 KCNA3P22001 575 aa13□□□□□ -0.33
DDB1-221ENST00000543162 PHKA1P46020 1223 aa13□□□□□ -0.33
DDB1-221ENST00000543162 CCDC102BQ68D86 513 aa13□□□□□ -0.33
DDB1-221ENST00000543162 CNTROBQ8N137 903 aa13□□□□□ -0.33
DDB1-221ENST00000543162 MPNDQ8N594 471 aa13□□□□□ -0.33
DDB1-221ENST00000543162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13□□□□□ -0.33
DDB1-221ENST00000543162 RILPL2Q969X0 211 aa13□□□□□ -0.33
DDB1-221ENST00000543162 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
DDB1-221ENST00000543162 HAUS7Q99871 368 aa13□□□□□ -0.33
DDB1-221ENST00000543162 PIM2Q9P1W9 311 aa13□□□□□ -0.33
DDB1-221ENST00000543162 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 GYG1P46976 350 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 BCAMP50895 628 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 OLFM4Q6UX06 510 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
DDB1-221ENST00000543162 VPS37DQ86XT2 251 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
DDB1-221ENST00000543162 GNL3LQ9NVN8 582 aaKnown RBP12.99□□□□□ -0.33
DDB1-221ENST00000543162 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
DDB1-221ENST00000543162 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
DDB1-221ENST00000543162 CDC45O75419 566 aa12.98□□□□□ -0.33
DDB1-221ENST00000543162 KLRK1P26718 216 aa12.98□□□□□ -0.33
DDB1-221ENST00000543162 ARID4AP29374 1257 aaPredicted RBP12.98□□□□□ -0.33
DDB1-221ENST00000543162 C7orf43Q8WVR3 580 aa12.98□□□□□ -0.33
DDB1-221ENST00000543162 EVI5LQ96CN4 794 aa12.98□□□□□ -0.33
DDB1-221ENST00000543162 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
DDB1-221ENST00000543162 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
DDB1-221ENST00000543162 LTBP1Q14766 1721 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 SOCS7O14512 581 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 C21orf2O43822 256 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
DDB1-221ENST00000543162 FKBP4Q02790 459 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDB1-221ENST00000543162 SCARF1Q14162 830 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
DDB1-221ENST00000543162 C15orf52Q6ZUT6 534 aaKnown RBP12.97□□□□□ -0.33
DDB1-221ENST00000543162 FBXO33Q7Z6M2 555 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
DDB1-221ENST00000543162 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 AK9Q5TCS8 1911 aa12.97□□□□□ -0.33
DDB1-221ENST00000543162 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 GOLIM4O00461 696 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 MCAMP43121 646 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 RASGRF1Q13972 1273 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 CCDC93Q567U6 631 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 SOGA3Q5TF21 947 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 CASC1Q6TDU7 716 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 ZNF804AQ7Z570 1209 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 TXNRD3Q86VQ6 643 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.33
DDB1-221ENST00000543162 NDUFB9Q9Y6M9 179 aa12.96□□□□□ -0.33
DDB1-221ENST00000543162 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 SEMA3EO15041 775 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
DDB1-221ENST00000543162 ZAP70P43403 619 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 PI16Q6UXB8 463 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 TBC1D9Q6ZT07 1266 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 RTKN2Q8IZC4 609 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 EYA3Q99504 573 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
DDB1-221ENST00000543162 HMG20BQ9P0W2 317 aa12.95□□□□□ -0.34
DDB1-221ENST00000543162 IQSEC3Q9UPP2 1182 aaPredicted RBP12.95□□□□□ -0.34
DDB1-221ENST00000543162 AKAP11Q9UKA4 1901 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
DDB1-221ENST00000543162 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
DDB1-221ENST00000543162 WASHC4Q2M389 1173 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 KBTBD3Q8NAB2 608 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 RTFDC1Q9BY42 306 aaPredicted RBP12.94□□□□□ -0.34
DDB1-221ENST00000543162 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
DDB1-221ENST00000543162 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
DDB1-221ENST00000543162 HIP1O00291 1037 aa12.93□□□□□ -0.34
DDB1-221ENST00000543162 CHMLP26374 656 aa12.93□□□□□ -0.34
DDB1-221ENST00000543162 ANTXR1Q9H6X2 564 aa12.93□□□□□ -0.34
DDB1-221ENST00000543162 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
DDB1-221ENST00000543162 BCS1LQ9Y276 419 aa12.93□□□□□ -0.34
DDB1-221ENST00000543162 G3V3G9 751 aa12.92□□□□□ -0.34
DDB1-221ENST00000543162 ZBTB22O15209 634 aa12.92□□□□□ -0.34
DDB1-221ENST00000543162 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
DDB1-221ENST00000543162 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
DDB1-221ENST00000543162 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
DDB1-221ENST00000543162 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
DDB1-221ENST00000543162 TDRD7Q8NHU6 1098 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms