RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 TSPYL6Q8N831 410 aa14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 AGBL3Q8NEM8 1001 aa14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 ZNF296Q8WUU4 475 aaPredicted RBP14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 ISCA1Q9BUE6 129 aa14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 CHPF2Q9P2E5 772 aa14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 ANKIB1Q9P2G1 1089 aa14.61□□□□□ -0.07
SRGAP1-205ENST00000542841 ATP5J2-PTCD1G3V325 749 aa14.6□□□□□ -0.07
SRGAP1-205ENST00000542841 TBC1D8O95759 1140 aa14.6□□□□□ -0.07
SRGAP1-205ENST00000542841 IRX6P78412 446 aaPredicted RBP14.6□□□□□ -0.07
SRGAP1-205ENST00000542841 RSBN1LQ6PCB5 846 aaPredicted RBP14.6□□□□□ -0.07
SRGAP1-205ENST00000542841 PITPNM2Q9BZ72 1349 aa14.6□□□□□ -0.07
SRGAP1-205ENST00000542841 PAPPA2Q9BXP8 1791 aa14.6□□□□□ -0.07
SRGAP1-205ENST00000542841 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
SRGAP1-205ENST00000542841 PLIN1O60240 522 aa14.59□□□□□ -0.07
SRGAP1-205ENST00000542841 UFL1O94874 794 aa14.59□□□□□ -0.07
SRGAP1-205ENST00000542841 USP17L8P0C7I0 530 aa14.59□□□□□ -0.07
SRGAP1-205ENST00000542841 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
SRGAP1-205ENST00000542841 MYOZ2Q9NPC6 264 aa14.59□□□□□ -0.07
SRGAP1-205ENST00000542841 GGA1Q9UJY5 639 aa14.59□□□□□ -0.07
SRGAP1-205ENST00000542841 ZNF609O15014 1411 aa14.58□□□□□ -0.07
SRGAP1-205ENST00000542841 HSP90B1P14625 803 aaKnown RBP14.58□□□□□ -0.08
SRGAP1-205ENST00000542841 KRT24Q2M2I5 525 aa14.58□□□□□ -0.08
SRGAP1-205ENST00000542841 HDGFL1Q5TGJ6 251 aa14.58□□□□□ -0.08
SRGAP1-205ENST00000542841 ATF7IPQ6VMQ6 1270 aa14.58□□□□□ -0.08
SRGAP1-205ENST00000542841 GCC1Q96CN9 775 aa14.58□□□□□ -0.08
SRGAP1-205ENST00000542841 DBF4Q9UBU7 674 aaPredicted RBP14.58□□□□□ -0.08
SRGAP1-205ENST00000542841 SCN9AQ15858 1988 aa14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 GPR25O00155 361 aa14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 TM4SF4P48230 202 aa14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 TRIM28Q13263 835 aaKnown RBP14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 NOM1Q5C9Z4 860 aaKnown RBP14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 CCDC30Q5VVM6 783 aa14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 FBXO46Q6PJ61 603 aaPredicted RBP14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 MOB2Q70IA6 237 aa14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 FRAT1Q92837 279 aaPredicted RBP14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 COL4A1P02462 1669 aa14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 PTPRCP08575 1304 aa14.57□□□□□ -0.08
SRGAP1-205ENST00000542841 UBE2Q2LH0YL09 131 aa14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 ELL2O00472 640 aaPredicted RBP14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 TTLL12Q14166 644 aaPredicted RBP14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 DZIP1LQ8IYY4 767 aaKnown RBP14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 ZBTB38Q8NAP3 1195 aaPredicted RBP14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 GMLQ99445 158 aa14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 STK31Q9BXU1 1019 aa14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 API5Q9BZZ5 524 aaKnown RBP14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 SEC31BQ9NQW1 1179 aa14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 HYPKQ9NX55 129 aa14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
SRGAP1-205ENST00000542841 USP17L3A6NCW0 530 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 USP17L4A6NCW7 530 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 NF2P35240 595 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 SREBF2Q12772 1141 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 CCDC152Q4G0S7 254 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 USP17L1Q7RTZ2 530 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 PODNQ7Z5L7 613 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 FTSJ3Q8IY81 847 aaKnown RBP14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 CRBNQ96SW2 442 aa14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 CHMP4BQ9H444 224 aaKnown RBP14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
SRGAP1-205ENST00000542841 FKTNO75072 461 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 TRIM27P14373 513 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 C20orf194Q5TEA3 1177 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 PRAMEF18Q5VWM3 479 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 OGFOD1Q8N543 542 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 EXOC6Q8TAG9 804 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 XDHP47989 1333 aa14.54□□□□□ -0.08
SRGAP1-205ENST00000542841 ATP2B4P23634 1241 aa14.53□□□□□ -0.08
SRGAP1-205ENST00000542841 MKRN3Q13064 507 aaKnown RBP14.53□□□□□ -0.08
SRGAP1-205ENST00000542841 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
SRGAP1-205ENST00000542841 CFHR5Q9BXR6 569 aa14.53□□□□□ -0.08
SRGAP1-205ENST00000542841 MVPQ14764 893 aaKnown RBP14.52□□□□□ -0.09
SRGAP1-205ENST00000542841 ANKRD18AQ8IVF6 992 aa14.52□□□□□ -0.09
SRGAP1-205ENST00000542841 DDX19BQ9UMR2 479 aa14.52□□□□□ -0.09
SRGAP1-205ENST00000542841 PDE8AO60658 829 aa14.51□□□□□ -0.09
SRGAP1-205ENST00000542841 ARMC9Q7Z3E5 817 aa14.51□□□□□ -0.09
SRGAP1-205ENST00000542841 PSME4Q14997 1843 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 MYO3BQ8WXR4 1341 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 WNT10BO00744 389 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 ALDH1A1P00352 501 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 PCCAP05165 728 aaPredicted RBP14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 HABP4Q5JVS0 413 aaKnown RBP14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 CCDC191Q8NCU4 936 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 PANK1Q8TE04 598 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 CCDC136Q96JN2 1154 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 CCDC85AQ96PX6 553 aaPredicted RBP14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 MYD88Q99836 296 aa14.5□□□□□ -0.09
SRGAP1-205ENST00000542841 MKI67P46013 3256 aaKnown RBP14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 MMP14P50281 582 aa14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 PTPN12Q05209 780 aaKnown RBP14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 DACT2Q5SW24 774 aa14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 INTS3Q68E01 1043 aaKnown RBP14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 FBXW7Q969H0 707 aa14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 R3HDMLQ9H3Y0 253 aa14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 COG6Q9Y2V7 657 aa14.49□□□□□ -0.09
SRGAP1-205ENST00000542841 MED23Q9ULK4 1368 aa14.48□□□□□ -0.09
SRGAP1-205ENST00000542841 RLBP1P12271 317 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms