RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 AGXT2Q9BYV1 514 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
LCOR-209ENST00000540664 ATP6V1DQ9Y5K8 247 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 BCORQ6W2J9 1755 aa11.37□□□□□ -0.59
LCOR-209ENST00000540664 M0R2C6 588 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 CAMTA2O94983 1202 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
LCOR-209ENST00000540664 METTL24Q5JXM2 366 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 OSBP2Q969R2 916 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 FOXP2O15409 715 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 PDE8BO95263 885 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 EXOSC10Q01780 885 aaKnown RBP11.36□□□□□ -0.59
LCOR-209ENST00000540664 GORABQ5T7V8 394 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 RTL9Q8NET4 1388 aa11.36□□□□□ -0.59
LCOR-209ENST00000540664 GADD45BO75293 160 aaPredicted RBP11.35□□□□□ -0.59
LCOR-209ENST00000540664 FGFR2P21802 821 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 ZAP70P43403 619 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.599e-6■□□□□ 10.4
LCOR-209ENST00000540664 SUSD4Q5VX71 490 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 Q6ZUG5 572 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 FBXL16Q8N461 479 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 CNPY2Q9Y2B0 182 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 ATRNO75882 1429 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 SPATA31A6Q5VVP1 1343 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 PDCP20941 246 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 MCAMP43121 646 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 PARP10Q53GL7 1025 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
LCOR-209ENST00000540664 FNBP4Q8N3X1 1017 aaPredicted RBP11.35□□□□□ -0.59
LCOR-209ENST00000540664 SMARCC1Q92922 1105 aaPredicted RBP11.35□□□□□ -0.59
LCOR-209ENST00000540664 CNNM1Q9NRU3 951 aa11.35□□□□□ -0.59
LCOR-209ENST00000540664 MROH5Q6ZUA9 1318 aa11.34□□□□□ -0.59
LCOR-209ENST00000540664 ARID4AP29374 1257 aaPredicted RBP11.34□□□□□ -0.59
LCOR-209ENST00000540664 LARP1BQ659C4 914 aaKnown RBP11.34□□□□□ -0.59
LCOR-209ENST00000540664 APPBP2Q92624 585 aa11.34□□□□□ -0.59
LCOR-209ENST00000540664 GDPD2Q9HCC8 539 aa11.34□□□□□ -0.59
LCOR-209ENST00000540664 E7EWF7 191 aa11.33□□□□□ -0.59
LCOR-209ENST00000540664 UTP14AQ9BVJ6 771 aaKnown RBP11.33□□□□□ -0.59
LCOR-209ENST00000540664 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 DOCK2Q92608 1830 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 A0A0G2JLW4 131 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 PFKFB2O60825 505 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 NTSR2O95665 410 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 NASPP49321 788 aaPredicted RBP11.33□□□□□ -0.6
LCOR-209ENST00000540664 UBE2HP62256 183 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 FOXD4L6Q3SYB3 417 aaPredicted RBP11.33□□□□□ -0.6
LCOR-209ENST00000540664 PI16Q6UXB8 463 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 FOXD4L3Q6VB84 417 aaPredicted RBP11.33□□□□□ -0.6
LCOR-209ENST00000540664 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 SMARCC2Q8TAQ2 1214 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 LPIN2Q92539 896 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 SYAP1Q96A49 352 aaPredicted RBP11.33□□□□□ -0.6
LCOR-209ENST00000540664 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
LCOR-209ENST00000540664 KCNQ2O43526 872 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 EVCP57679 992 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
LCOR-209ENST00000540664 PUM3Q15397 648 aaKnown RBP11.32□□□□□ -0.6
LCOR-209ENST00000540664 LLPHQ9BRT6 129 aaKnown RBP11.32□□□□□ -0.6
LCOR-209ENST00000540664 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
LCOR-209ENST00000540664 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 SYCE3A1L190 88 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 RGL2O15211 777 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 DTNBO60941 627 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 ADD2P35612 726 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 DNM1Q05193 864 aaKnown RBP11.32□□□□□ -0.6
LCOR-209ENST00000540664 CSPP1Q1MSJ5 1256 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 CDC37L1Q7L3B6 337 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 BRF1Q92994 677 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.32□□□□□ -0.6
LCOR-209ENST00000540664 USP21Q9UK80 565 aa11.32□□□□□ -0.6
LCOR-209ENST00000540664 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
LCOR-209ENST00000540664 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
LCOR-209ENST00000540664 HCLS1P14317 486 aaPredicted RBP11.31□□□□□ -0.6
LCOR-209ENST00000540664 SCRN1Q12765 414 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 STK3Q13188 491 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 TTLL5Q6EMB2 1281 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 ZSCAN25Q6NSZ9 544 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 SCN7AQ01118 1682 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 FGAP02671 866 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 HSP90B1P14625 803 aaKnown RBP11.31□□□□□ -0.6
LCOR-209ENST00000540664 PHKA1P46020 1223 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 CCDC173Q0VFZ6 552 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 UBE3CQ15386 1083 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
LCOR-209ENST00000540664 ZNF274Q96GC6 653 aaPredicted RBP11.31□□□□□ -0.6
LCOR-209ENST00000540664 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
LCOR-209ENST00000540664 ELP1O95163 1332 aa11.3□□□□□ -0.6
LCOR-209ENST00000540664 GPAA1O43292 621 aa11.3□□□□□ -0.6
LCOR-209ENST00000540664 JAK2O60674 1132 aa11.3□□□□□ -0.6
LCOR-209ENST00000540664 PHF14O94880 888 aa11.3□□□□□ -0.6
LCOR-209ENST00000540664 LRRC2Q9BYS8 371 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms