RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 TECPR2O15040 1411 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 E7EWF7 191 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 HMGB1P09429 215 aaKnown RBP11.54□□□□□ -0.56
PHC1-208ENST00000540574 HMGN5P82970 282 aaKnown RBP11.54□□□□□ -0.56
PHC1-208ENST00000540574 SCRN1Q12765 414 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 CEP57L1Q8IYX8 460 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 NCOA3Q9Y6Q9 1424 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 HSPD1P10809 573 aaKnown RBP11.54□□□□□ -0.56
PHC1-208ENST00000540574 MCM5P33992 734 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 TMEM67Q5HYA8 995 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 AOPEPQ8N6M6 819 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 NCOA7Q8NI08 942 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 COPRSQ9NQ92 184 aa11.54□□□□□ -0.56
PHC1-208ENST00000540574 ITSN1Q15811 1721 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 SALL3Q9BXA9 1300 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
PHC1-208ENST00000540574 METAP2P50579 478 aaKnown RBP eCLIP11.53□□□□□ -0.56
PHC1-208ENST00000540574 KLHL10Q6JEL2 608 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 DZIP3Q86Y13 1208 aaKnown RBP11.53□□□□□ -0.56
PHC1-208ENST00000540574 AGLP35573 1532 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 DIP2AQ14689 1571 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 DLG5Q8TDM6 1919 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 hCG_1642624A0A1W2PR95 340 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 GOLGA8AA7E2F4 631 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 GPAA1O43292 621 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 CBX1P83916 185 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 NAT10Q9H0A0 1025 aaKnown RBP11.53□□□□□ -0.56
PHC1-208ENST00000540574 SSH2Q76I76 1423 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 PTPN21Q16825 1174 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
PHC1-208ENST00000540574 NBPF15Q8N660 670 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 CBX8Q9HC52 389 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 NRBP1Q9UHY1 535 aa11.53□□□□□ -0.56
PHC1-208ENST00000540574 SART3Q15020 963 aaKnown RBP11.52□□□□□ -0.56
PHC1-208ENST00000540574 PDIA6Q15084 440 aa11.52□□□□□ -0.56
PHC1-208ENST00000540574 GTF3C6Q969F1 213 aa11.52□□□□□ -0.56
PHC1-208ENST00000540574 PCDH11XQ9BZA7 1347 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 PCDH11YQ9BZA8 1340 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
PHC1-208ENST00000540574 IGHMBP2P38935 993 aaKnown RBP11.52□□□□□ -0.57
PHC1-208ENST00000540574 TOB2Q14106 344 aaPredicted RBP11.52□□□□□ -0.57
PHC1-208ENST00000540574 MAGEB6Q8N7X4 407 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 UBAC1Q9BSL1 405 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 ALG1Q9BT22 464 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 INCENPQ9NQS7 918 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 SLAIN2Q9P270 581 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.57
PHC1-208ENST00000540574 ADD1P35611 737 aaKnown RBP11.52□□□□□ -0.57
PHC1-208ENST00000540574 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 CFAP100Q494V2 611 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 GREM2Q9H772 168 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 SLC12A7Q9Y666 1083 aa11.52□□□□□ -0.57
PHC1-208ENST00000540574 RRP9O43818 475 aaKnown RBP11.51□□□□□ -0.57
PHC1-208ENST00000540574 TNNT1P13805 278 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 CCDC191Q8NCU4 936 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 OSBP2Q969R2 916 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 HAUS7Q99871 368 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 PRDM1O75626 825 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 FGAP02671 866 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
PHC1-208ENST00000540574 IGSF3O75054 1194 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 SLC3A2P08195 630 aaKnown RBP11.51□□□□□ -0.57
PHC1-208ENST00000540574 CTDSPL2Q05D32 466 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 MAP3K12Q12852 859 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 OLFM4Q6UX06 510 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 AIFM3Q96NN9 605 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
PHC1-208ENST00000540574 ZSCAN16Q9H4T2 348 aaPredicted RBP11.51□□□□□ -0.57
PHC1-208ENST00000540574 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
PHC1-208ENST00000540574 M0R2C6 588 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 MTX1Q13505 466 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 UVSSAQ2YD98 709 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 TMC6Q7Z403 805 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 TRIM22Q8IYM9 498 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 ARMT1Q9H993 441 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.5□□□□□ -0.57
PHC1-208ENST00000540574 CEMIPQ8WUJ3 1361 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 PXDNQ92626 1479 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 HLFQ16534 295 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 CCDC112Q8NEF3 446 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 PUS7LQ9H0K6 701 aaKnown RBP11.5□□□□□ -0.57
PHC1-208ENST00000540574 ANO10Q9NW15 660 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 ZBTB1Q9Y2K1 713 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 MAST3O60307 1309 aa11.5□□□□□ -0.57
PHC1-208ENST00000540574 RPAP1Q9BWH6 1393 aaPredicted RBP11.49□□□□□ -0.57
PHC1-208ENST00000540574 MBD4O95243 580 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 TCIRG1Q13488 830 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 SCARF1Q14162 830 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
PHC1-208ENST00000540574 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 PYCARDQ9ULZ3 195 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 SLC4A4Q9Y6R1 1079 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 ANKARQ7Z5J8 1434 aa11.49□□□□□ -0.57
PHC1-208ENST00000540574 ZBTB43O43298 467 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms