RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 SIPA1L3O60292 1781 aaPredicted RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 ELL2O00472 640 aaPredicted RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 PLSCR1O15162 318 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 ZNF445P59923 1031 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 BMS1Q14692 1282 aaKnown RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 LONRF1Q17RB8 773 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 MAP9Q49MG5 647 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 INTS3Q68E01 1043 aaKnown RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 CC2D1AQ6P1N0 951 aaPredicted RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 EP400NLQ6ZTU2 488 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 RNF217Q8TC41 542 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 IL17RAQ96F46 866 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 PDLIM2Q96JY6 352 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 UQCRHLA0A096LP55 91 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 UQCRHP07919 91 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 PRKAR2BP31323 418 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 GNAI1P63096 354 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 IRX5P78411 483 aaPredicted RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 RPAINQ86UA6 219 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 IFNL2Q8IZJ0 200 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 MRPL50Q8N5N7 158 aaKnown RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 RSPH1Q8WYR4 309 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 PBXIP1Q96AQ6 731 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 RSPH9Q9H1X1 276 aaPredicted RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 FAM13BQ9NYF5 915 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 R3HCC1Q9Y3T6 440 aaKnown RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 C5P01031 1676 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 ERCC5P28715 1186 aaPredicted RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 ZSCAN23Q3MJ62 389 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 SASS6Q6UVJ0 657 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 RAVER1Q8IY67 606 aaKnown RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 SNRKQ9NRH2 765 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 SWAP70Q9UH65 585 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 VAMP4O75379 141 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 TTC39BQ5VTQ0 682 aaPredicted RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 NYAP1Q6ZVC0 841 aa6.41□□□□□ -1.38
CKAP5-212ENST00000533413 GEMIN8Q9NWZ8 242 aaKnown RBP6.41□□□□□ -1.38
CKAP5-212ENST00000533413 TAF1LQ8IZX4 1826 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 NAT2P11245 290 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 NFE2L2Q16236 605 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 E2F4Q16254 413 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 JAZF1Q86VZ6 243 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 USHBP1Q8N6Y0 703 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 VRTNQ9H8Y1 702 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 GDPD2Q9HCC8 539 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 FEZ2Q9UHY8 353 aaPredicted RBP6.4□□□□□ -1.38
CKAP5-212ENST00000533413 U3KPZ7 1027 aaPredicted RBP6.4□□□□□ -1.38
CKAP5-212ENST00000533413 UBR2Q8IWV8 1755 aa6.4□□□□□ -1.38
CKAP5-212ENST00000533413 LRP5O75197 1615 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 ERVV-2B6SEH9 535 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 FAM200BP0CF97 657 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 PHKG2P15735 406 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 SSR1P43307 286 aaKnown RBP6.4□□□□□ -1.39
CKAP5-212ENST00000533413 AKAP4Q5JQC9 854 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 C1orf141Q5JVX7 400 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 SLC27A3Q5K4L6 730 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 C1QTNF12Q5T7M4 302 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 SULT6B1Q6IMI4 303 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 ZNF710Q8N1W2 664 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 JDP2Q8WYK2 163 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 SMARCC1Q92922 1105 aaPredicted RBP6.4□□□□□ -1.39
CKAP5-212ENST00000533413 CHMP4CQ96CF2 233 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 DCAF5Q96JK2 942 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 COL4A3BPQ9Y5P4 624 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 MRVI1Q9Y6F6 885 aa6.4□□□□□ -1.39
CKAP5-212ENST00000533413 SMAPO00193 183 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 TRIM37O94972 964 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 REC8O95072 547 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 APBA3O96018 575 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 TGFB3P10600 412 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 NAT1P18440 290 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 TWISTNBQ3B726 338 aaPredicted RBP6.39□□□□□ -1.39
CKAP5-212ENST00000533413 NPAS4Q8IUM7 802 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 PLEKHM2Q8IWE5 1019 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 MKL1Q969V6 931 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 SCYL1Q96KG9 808 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 SENP7Q9BQF6 1050 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 RBSNQ9H1K0 784 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 LMBRD1Q9NUN5 540 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 IFT57Q9NWB7 429 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 COL5A3P25940 1745 aaPredicted RBP6.39□□□□□ -1.39
CKAP5-212ENST00000533413 DLG5Q8TDM6 1919 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 HMOX1P09601 288 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 TTC22Q5TAA0 569 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 MFSD4BQ5TF39 518 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 SIRT2Q8IXJ6 389 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 DDX54Q8TDD1 881 aaKnown RBP6.39□□□□□ -1.39
CKAP5-212ENST00000533413 CAMKK2Q96RR4 588 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 THUMPD2Q9BTF0 503 aaKnown RBP6.39□□□□□ -1.39
CKAP5-212ENST00000533413 USP26Q9BXU7 913 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 SPC25Q9HBM1 224 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 CEP126Q9P2H0 1117 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 USTQ9Y2C2 406 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 COL24A1Q17RW2 1714 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 CASZ1Q86V15 1759 aa6.39□□□□□ -1.39
CKAP5-212ENST00000533413 HTATSF1O43719 755 aaKnown RBP6.39□□□□□ -1.39
CKAP5-212ENST00000533413 FAM163BP0C2L3 166 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms