RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 GPSM2P81274 684 aa17.37■□□□□ 0.37
TRIM3-212ENST00000533064 CC2D2BQ6DHV5 1058 aa17.37■□□□□ 0.37
TRIM3-212ENST00000533064 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
TRIM3-212ENST00000533064 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
TRIM3-212ENST00000533064 MYO5AQ9Y4I1 1855 aaKnown RBP17.37■□□□□ 0.37
TRIM3-212ENST00000533064 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 TTC39AQ5SRH9 613 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 MPNDQ8N594 471 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 FER1L6Q2WGJ9 1857 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 SNAP23O00161 211 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 UFL1O94874 794 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 ADORA1P30542 326 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 TTC22Q5TAA0 569 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
TRIM3-212ENST00000533064 VPS37DQ86XT2 251 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 BACH2Q9BYV9 841 aa17.36■□□□□ 0.37
TRIM3-212ENST00000533064 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
TRIM3-212ENST00000533064 GOLGB1Q14789 3259 aaKnown RBP17.35■□□□□ 0.37
TRIM3-212ENST00000533064 C6orf229H3BNL8 230 aa17.35■□□□□ 0.37
TRIM3-212ENST00000533064 DALRD3Q5D0E6 543 aaKnown RBP17.35■□□□□ 0.37
TRIM3-212ENST00000533064 SOGA3Q5TF21 947 aa17.35■□□□□ 0.37
TRIM3-212ENST00000533064 ATP5JP18859 108 aa17.34■□□□□ 0.37
TRIM3-212ENST00000533064 C21orf2O43822 256 aa17.33■□□□□ 0.37
TRIM3-212ENST00000533064 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.37
TRIM3-212ENST00000533064 CCDC93Q567U6 631 aa17.33■□□□□ 0.37
TRIM3-212ENST00000533064 BMP2KLQ5H9B9 411 aa17.33■□□□□ 0.37
TRIM3-212ENST00000533064 PI4K2BQ8TCG2 481 aa17.33■□□□□ 0.37
TRIM3-212ENST00000533064 FHDC1Q9C0D6 1143 aaPredicted RBP17.33■□□□□ 0.37
TRIM3-212ENST00000533064 GNL3LQ9NVN8 582 aaKnown RBP17.33■□□□□ 0.37
TRIM3-212ENST00000533064 CCDC102BQ68D86 513 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 OLFM4Q6UX06 510 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 TBC1D16Q8TBP0 767 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 C7orf43Q8WVR3 580 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 SLC51AQ86UW1 340 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 RTKN2Q8IZC4 609 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRIM3-212ENST00000533064 EYA3Q99504 573 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 POLLQ9UGP5 575 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
TRIM3-212ENST00000533064 MED23Q9ULK4 1368 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 HIBADHP31937 336 aaKnown RBP17.31■□□□□ 0.36
TRIM3-212ENST00000533064 PHKA1P46020 1223 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 GYG1P46976 350 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 BCAMP50895 628 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
TRIM3-212ENST00000533064 ZNF804AQ7Z570 1209 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 SUPT20HQ8NEM7 779 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 ZNF512BQ96KM6 892 aaPredicted RBP17.31■□□□□ 0.36
TRIM3-212ENST00000533064 BCS1LQ9Y276 419 aa17.31■□□□□ 0.36
TRIM3-212ENST00000533064 DOCK2Q92608 1830 aa17.3■□□□□ 0.36
TRIM3-212ENST00000533064 WTIPA6NIX2 430 aaPredicted RBP17.3■□□□□ 0.36
TRIM3-212ENST00000533064 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
TRIM3-212ENST00000533064 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
TRIM3-212ENST00000533064 ARID4AP29374 1257 aaPredicted RBP17.3■□□□□ 0.36
TRIM3-212ENST00000533064 CNTROBQ8N137 903 aa17.3■□□□□ 0.36
TRIM3-212ENST00000533064 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
TRIM3-212ENST00000533064 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
TRIM3-212ENST00000533064 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
TRIM3-212ENST00000533064 C8orf34Q49A92 452 aa17.29■□□□□ 0.36
TRIM3-212ENST00000533064 FAM84BQ96KN1 310 aaPredicted RBP17.29■□□□□ 0.36
TRIM3-212ENST00000533064 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
TRIM3-212ENST00000533064 MAP4K4O95819 1239 aaPredicted RBP17.29■□□□□ 0.36
TRIM3-212ENST00000533064 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
TRIM3-212ENST00000533064 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
TRIM3-212ENST00000533064 HAUS7Q99871 368 aa17.29■□□□□ 0.36
TRIM3-212ENST00000533064 G3V3G9 751 aa17.28■□□□□ 0.36
TRIM3-212ENST00000533064 KLRK1P26718 216 aa17.28■□□□□ 0.36
TRIM3-212ENST00000533064 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRIM3-212ENST00000533064 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
TRIM3-212ENST00000533064 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
TRIM3-212ENST00000533064 SYT17Q9BSW7 474 aa17.28■□□□□ 0.36
TRIM3-212ENST00000533064 RTFDC1Q9BY42 306 aaPredicted RBP17.28■□□□□ 0.36
TRIM3-212ENST00000533064 PSME4Q14997 1843 aa17.28■□□□□ 0.36
TRIM3-212ENST00000533064 DICER1Q9UPY3 1922 aaKnown RBP17.28■□□□□ 0.36
TRIM3-212ENST00000533064 IRS2Q9Y4H2 1338 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 RIMBP2O15034 1052 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 SEMA3EO15041 775 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 SDSP20132 328 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 MCAMP43121 646 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 TXNRD3Q86VQ6 643 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 EVI5LQ96CN4 794 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 PSMD1Q99460 953 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 PAG1Q9NWQ8 432 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 DENND2AQ9ULE3 1009 aa17.27■□□□□ 0.36
TRIM3-212ENST00000533064 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
TRIM3-212ENST00000533064 SBF1O95248 1867 aa17.26■□□□□ 0.35
TRIM3-212ENST00000533064 RASGRF1Q13972 1273 aa17.26■□□□□ 0.35
TRIM3-212ENST00000533064 TTF1Q15361 905 aaPredicted RBP17.26■□□□□ 0.35
TRIM3-212ENST00000533064 SPATA5Q8NB90 893 aa17.26■□□□□ 0.35
TRIM3-212ENST00000533064 SNRKQ9NRH2 765 aa17.26■□□□□ 0.35
TRIM3-212ENST00000533064 IQSEC3Q9UPP2 1182 aaPredicted RBP17.26■□□□□ 0.35
TRIM3-212ENST00000533064 SRCAPQ6ZRS2 3230 aa17.26■□□□□ 0.35
TRIM3-212ENST00000533064 GOLIM4O00461 696 aa17.25■□□□□ 0.35
TRIM3-212ENST00000533064 ZAP70P43403 619 aa17.25■□□□□ 0.35
TRIM3-212ENST00000533064 SCARF1Q14162 830 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms