RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 POLA2Q14181 598 aa25.81■■□□□ 1.72
CCS-207ENST00000531990 ZNF804AQ7Z570 1209 aa25.81■■□□□ 1.72
CCS-207ENST00000531990 SSH3Q8TE77 659 aa25.81■■□□□ 1.72
CCS-207ENST00000531990 VEGFAP15692 232 aaPredicted RBP25.8■■□□□ 1.72
CCS-207ENST00000531990 KLRK1P26718 216 aa25.8■■□□□ 1.72
CCS-207ENST00000531990 G3BP1Q13283 466 aaKnown RBP eCLIP25.8■■□□□ 1.72
CCS-207ENST00000531990 CEP85Q6P2H3 762 aa25.8■■□□□ 1.72
CCS-207ENST00000531990 TXNRD3Q86VQ6 643 aa25.8■■□□□ 1.72
CCS-207ENST00000531990 VGLL2Q8N8G2 317 aa25.8■■□□□ 1.72
CCS-207ENST00000531990 L3MBTL3Q96JM7 780 aaPredicted RBP25.8■■□□□ 1.72
CCS-207ENST00000531990 SCN4AP35499 1836 aa25.79■■□□□ 1.72
CCS-207ENST00000531990 IQCA1LA6NCM1 817 aa25.79■■□□□ 1.72
CCS-207ENST00000531990 PUM3Q15397 648 aaKnown RBP25.79■■□□□ 1.72
CCS-207ENST00000531990 RPAP2Q8IXW5 612 aaPredicted RBP25.79■■□□□ 1.72
CCS-207ENST00000531990 LMOD1P29536 600 aaPredicted RBP25.78■■□□□ 1.72
CCS-207ENST00000531990 C16orf71Q8IYS4 520 aaPredicted RBP25.78■■□□□ 1.72
CCS-207ENST00000531990 SCN9AQ15858 1988 aa25.77■■□□□ 1.72
CCS-207ENST00000531990 HMMRO75330 724 aa25.77■■□□□ 1.72
CCS-207ENST00000531990 IFIT1P09914 478 aaKnown RBP25.77■■□□□ 1.72
CCS-207ENST00000531990 PSME4Q14997 1843 aa25.77■■□□□ 1.72
CCS-207ENST00000531990 PSMD14O00487 310 aa25.76■■□□□ 1.71
CCS-207ENST00000531990 SLC5A1P13866 664 aa25.76■■□□□ 1.71
CCS-207ENST00000531990 OS9Q13438 667 aaPredicted RBP25.76■■□□□ 1.71
CCS-207ENST00000531990 LPIN2Q92539 896 aa25.76■■□□□ 1.71
CCS-207ENST00000531990 IRS2Q9Y4H2 1338 aa25.76■■□□□ 1.71
CCS-207ENST00000531990 SURF6O75683 361 aaKnown RBP25.75■■□□□ 1.71
CCS-207ENST00000531990 CAVIN4Q5BKX8 364 aa25.75■■□□□ 1.71
CCS-207ENST00000531990 VPS37DQ86XT2 251 aa25.75■■□□□ 1.71
CCS-207ENST00000531990 CD209Q9NNX6 404 aa25.75■■□□□ 1.71
CCS-207ENST00000531990 KCNQ5Q9NR82 932 aa25.75■■□□□ 1.71
CCS-207ENST00000531990 HACL1Q9UJ83 578 aa25.75■■□□□ 1.71
CCS-207ENST00000531990 USP17L3A6NCW0 530 aa25.74■■□□□ 1.71
CCS-207ENST00000531990 USP17L4A6NCW7 530 aa25.74■■□□□ 1.71
CCS-207ENST00000531990 KIF3CO14782 793 aa25.74■■□□□ 1.71
CCS-207ENST00000531990 HIBADHP31937 336 aaKnown RBP25.74■■□□□ 1.71
CCS-207ENST00000531990 ATP2B3Q16720 1220 aa25.74■■□□□ 1.71
CCS-207ENST00000531990 USP17L1Q7RTZ2 530 aa25.74■■□□□ 1.71
CCS-207ENST00000531990 AKAP2Q9Y2D5 859 aa25.74■■□□□ 1.71
CCS-207ENST00000531990 SUPT16HQ9Y5B9 1047 aaKnown RBP25.74■■□□□ 1.71
CCS-207ENST00000531990 FGFR2P21802 821 aa25.73■■□□□ 1.71
CCS-207ENST00000531990 GYG1P46976 350 aa25.73■■□□□ 1.71
CCS-207ENST00000531990 GMPSP49915 693 aaPredicted RBP25.73■■□□□ 1.71
CCS-207ENST00000531990 FBXW7Q969H0 707 aa25.73■■□□□ 1.71
CCS-207ENST00000531990 POTECB2RU33 542 aa25.72■■□□□ 1.71
CCS-207ENST00000531990 RPS12P25398 132 aaKnown RBP25.72■■□□□ 1.71
CCS-207ENST00000531990 TFCP2Q12800 502 aa25.72■■□□□ 1.71
CCS-207ENST00000531990 FAM84BQ96KN1 310 aaPredicted RBP25.72■■□□□ 1.71
CCS-207ENST00000531990 CRBNQ96SW2 442 aa25.72■■□□□ 1.71
CCS-207ENST00000531990 NOP58Q9Y2X3 529 aaKnown RBP25.72■■□□□ 1.71
CCS-207ENST00000531990 VIL1P09327 827 aaKnown RBP25.71■■□□□ 1.71
CCS-207ENST00000531990 IL1R1P14778 569 aa25.71■■□□□ 1.71
CCS-207ENST00000531990 SCNN1DP51172 638 aa25.71■■□□□ 1.71
CCS-207ENST00000531990 STRIP1Q5VSL9 837 aa25.71■■□□□ 1.71
CCS-207ENST00000531990 EPHX2P34913 555 aa25.7■■□□□ 1.7
CCS-207ENST00000531990 HSP90AB4PQ58FF6 505 aa25.7■■□□□ 1.7
CCS-207ENST00000531990 TTLL5Q6EMB2 1281 aa25.7■■□□□ 1.7
CCS-207ENST00000531990 RSBN1LQ6PCB5 846 aaPredicted RBP25.7■■□□□ 1.7
CCS-207ENST00000531990 DPF2Q92785 391 aa25.7■■□□□ 1.7
CCS-207ENST00000531990 GPRC5DQ9NZD1 345 aa25.7■■□□□ 1.7
CCS-207ENST00000531990 ZBTB12Q9Y330 459 aaPredicted RBP25.7■■□□□ 1.7
CCS-207ENST00000531990 GTF2IP78347 998 aa25.69■■□□□ 1.7
CCS-207ENST00000531990 FBXO33Q7Z6M2 555 aa25.69■■□□□ 1.7
CCS-207ENST00000531990 TAF1DQ9H5J8 278 aaPredicted RBP25.69■■□□□ 1.7
CCS-207ENST00000531990 MYO3BQ8WXR4 1341 aa25.68■■□□□ 1.7
CCS-207ENST00000531990 FRAT2O75474 233 aaPredicted RBP25.68■■□□□ 1.7
CCS-207ENST00000531990 TOMM70O94826 608 aa25.68■■□□□ 1.7
CCS-207ENST00000531990 ERC1Q8IUD2 1116 aa25.68■■□□□ 1.7
CCS-207ENST00000531990 AGBL3Q8NEM8 1001 aa25.68■■□□□ 1.7
CCS-207ENST00000531990 ARAP2Q8WZ64 1704 aa25.68■■□□□ 1.7
CCS-207ENST00000531990 A0A1B0GUL7 405 aa25.67■■□□□ 1.7
CCS-207ENST00000531990 H7C1D1 291 aa25.67■■□□□ 1.7
CCS-207ENST00000531990 ZNF609O15014 1411 aa25.67■■□□□ 1.7
CCS-207ENST00000531990 SASH1O94885 1247 aa25.67■■□□□ 1.7
CCS-207ENST00000531990 EPS15P42566 896 aa25.67■■□□□ 1.7
CCS-207ENST00000531990 PNMA8AQ86V59 439 aaPredicted RBP25.67■■□□□ 1.7
CCS-207ENST00000531990 SIRT2Q8IXJ6 389 aa25.67■■□□□ 1.7
CCS-207ENST00000531990 TDRD7Q8NHU6 1098 aaKnown RBP25.67■■□□□ 1.7
CCS-207ENST00000531990 CNOT7Q9UIV1 285 aaKnown RBP25.67■■□□□ 1.7
CCS-207ENST00000531990 BCAMP50895 628 aa25.66■■□□□ 1.7
CCS-207ENST00000531990 EAPPQ56P03 285 aaPredicted RBP25.66■■□□□ 1.7
CCS-207ENST00000531990 DACT2Q5SW24 774 aa25.66■■□□□ 1.7
CCS-207ENST00000531990 NEUROD6Q96NK8 337 aa25.66■■□□□ 1.7
CCS-207ENST00000531990 ADARB2Q9NS39 739 aaKnown RBP25.66■■□□□ 1.7
CCS-207ENST00000531990 GNL3LQ9NVN8 582 aaKnown RBP25.66■■□□□ 1.7
CCS-207ENST00000531990 EXOC6BQ9Y2D4 811 aa25.66■■□□□ 1.7
CCS-207ENST00000531990 ZNF646O15015 1829 aaPredicted RBP25.65■■□□□ 1.7
CCS-207ENST00000531990 MYH13Q9UKX3 1938 aa25.65■■□□□ 1.7
CCS-207ENST00000531990 AAMPQ13685 434 aa25.65■■□□□ 1.7
CCS-207ENST00000531990 MICALL2Q8IY33 904 aa25.65■■□□□ 1.7
CCS-207ENST00000531990 GPR108Q9NPR9 543 aa25.65■■□□□ 1.7
CCS-207ENST00000531990 TIMM10P62072 90 aa25.64■■□□□ 1.7
CCS-207ENST00000531990 RBM46Q8TBY0 533 aaKnown RBP25.64■■□□□ 1.7
CCS-207ENST00000531990 GORABQ5T7V8 394 aa25.63■■□□□ 1.69
CCS-207ENST00000531990 USP50Q70EL3 339 aaPredicted RBP25.63■■□□□ 1.69
CCS-207ENST00000531990 XAGE2Q96GT9 111 aa25.63■■□□□ 1.69
CCS-207ENST00000531990 IQSEC3Q9UPP2 1182 aaPredicted RBP25.63■■□□□ 1.69
CCS-207ENST00000531990 CLEC11AQ9Y240 323 aa25.63■■□□□ 1.69
CCS-207ENST00000531990 FAM205AQ6ZU69 1335 aa25.63■■□□□ 1.69
CCS-207ENST00000531990 USP17L8P0C7I0 530 aa25.62■■□□□ 1.69
CCS-207ENST00000531990 ADORA1P30542 326 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms