RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 SKILP12757 684 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 PPP2R5CQ13362 524 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 RAPGEF1Q13905 1077 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 KARSQ15046 597 aaKnown RBP16.57■□□□□ 0.24
LRRK1-207ENST00000531270 IFNL2Q8IZJ0 200 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
LRRK1-207ENST00000531270 POGZQ7Z3K3 1410 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 CCDC171Q6TFL3 1326 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 ATP2A2P16615 1042 aaKnown RBP16.56■□□□□ 0.24
LRRK1-207ENST00000531270 KRT9P35527 623 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 GUCA1BQ9UMX6 200 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 GAS8O95995 478 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 SATB1Q01826 763 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 DCAF17Q5H9S7 520 aaPredicted RBP16.56■□□□□ 0.24
LRRK1-207ENST00000531270 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 MCM7P33993 719 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 UBXN1Q04323 297 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 BIRC2Q13490 618 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 CTAGE9A4FU28 777 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 EPSTI1Q96J88 318 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 ARFGAP3Q9NP61 516 aa16.56■□□□□ 0.24
LRRK1-207ENST00000531270 GTF2A1P52655 376 aaPredicted RBP16.55■□□□□ 0.24
LRRK1-207ENST00000531270 MSANTD4Q8NCY6 345 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 SEPT6Q14141 434 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 PPP2R5DQ14738 602 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
LRRK1-207ENST00000531270 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 ZSCAN23Q3MJ62 389 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
LRRK1-207ENST00000531270 SYT1P21579 422 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 C9orf84Q5VXU9 1444 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 Q6ZUG5 572 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 CPLX4Q7Z7G2 160 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 KRT79Q5XKE5 535 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 AGTPBP1Q9UPW5 1226 aa16.55■□□□□ 0.24
LRRK1-207ENST00000531270 GABPAQ06546 454 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 KIF5AQ12840 1032 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 SEPT14Q6ZU15 432 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 E7EVH7 732 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 MAGEB6P1A0A0J9YX57 407 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 HSPA1LP34931 641 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 CHST3Q7LGC8 479 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 ZNF804AQ7Z570 1209 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 UBLCP1Q8WVY7 318 aaPredicted RBP16.54■□□□□ 0.24
LRRK1-207ENST00000531270 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 B4DLN1 442 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 RHOXF2BP0C7M4 288 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 ZSCAN22P10073 491 aaPredicted RBP16.54■□□□□ 0.24
LRRK1-207ENST00000531270 MRPL12P52815 198 aaKnown RBP16.54■□□□□ 0.24
LRRK1-207ENST00000531270 TRAF1Q13077 416 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
LRRK1-207ENST00000531270 RHOXF2Q9BQY4 288 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 CLSTN2Q9H4D0 955 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 LZTFL1Q9NQ48 299 aa16.54■□□□□ 0.24
LRRK1-207ENST00000531270 PSMD6Q15008 389 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 MIGA1Q8NAN2 632 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 NOD1Q9Y239 953 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 PTPRCP08575 1304 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 SYNJ2O15056 1496 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 BIRC3Q13489 604 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 INF2Q27J81 1249 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 HS2ST1Q7LGA3 356 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 CCDC186Q7Z3E2 898 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 MRPS27Q92552 414 aaKnown RBP16.53■□□□□ 0.24
LRRK1-207ENST00000531270 SLC9C2Q5TAH2 1124 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 KCNG4Q8TDN1 519 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
LRRK1-207ENST00000531270 CNNM2Q9H8M5 875 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 VPS18Q9P253 973 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
LRRK1-207ENST00000531270 PRG4Q92954 1404 aaPredicted RBP16.52■□□□□ 0.24
LRRK1-207ENST00000531270 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.24
LRRK1-207ENST00000531270 LRRC9Q6ZRR7 1453 aa16.52■□□□□ 0.24
LRRK1-207ENST00000531270 BMP15O95972 392 aa16.52■□□□□ 0.24
LRRK1-207ENST00000531270 TRIM27P14373 513 aa16.52■□□□□ 0.24
LRRK1-207ENST00000531270 ALDH3A1P30838 453 aa16.52■□□□□ 0.24
LRRK1-207ENST00000531270 KRT222Q8N1A0 295 aa16.52■□□□□ 0.24
LRRK1-207ENST00000531270 CLGNO14967 610 aa16.52■□□□□ 0.23
LRRK1-207ENST00000531270 SNRPA1P09661 255 aaKnown RBP16.52■□□□□ 0.23
LRRK1-207ENST00000531270 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.23
LRRK1-207ENST00000531270 ANKRD24Q8TF21 1146 aa16.52■□□□□ 0.23
LRRK1-207ENST00000531270 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.52■□□□□ 0.23
LRRK1-207ENST00000531270 LMOD1P29536 600 aaPredicted RBP16.52■□□□□ 0.23
LRRK1-207ENST00000531270 KRT83P78385 493 aa16.52■□□□□ 0.23
LRRK1-207ENST00000531270 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.23
LRRK1-207ENST00000531270 PPANQ9NQ55 473 aaKnown RBP16.52■□□□□ 0.23
LRRK1-207ENST00000531270 GNAQP50148 359 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 SETDB1Q15047 1291 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 NIP7Q9Y221 180 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRRK1-207ENST00000531270 SPAG1Q07617 926 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 VPS52Q8N1B4 723 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 MCM9Q9NXL9 1143 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms