RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PTPRAP18433 802 aa8.21□□□□□ -1.1
C11orf88-204ENST00000529661 KCNA1Q09470 495 aa8.21□□□□□ -1.1
C11orf88-204ENST00000529661 ILDR2Q71H61 639 aa8.21□□□□□ -1.1
C11orf88-204ENST00000529661 POP1Q99575 1024 aaKnown RBP8.21□□□□□ -1.1
C11orf88-204ENST00000529661 DZANK1Q9NVP4 752 aa8.21□□□□□ -1.1
C11orf88-204ENST00000529661 PPME1Q9Y570 386 aa8.21□□□□□ -1.1
C11orf88-204ENST00000529661 DEAF1O75398 565 aaPredicted RBP8.2□□□□□ -1.1
C11orf88-204ENST00000529661 CDC27P30260 824 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 ADAMTSL4Q6UY14 1074 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 FBXO11Q86XK2 927 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 CACTIN-AS1Q8N1I8 211 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 HHIPQ96QV1 700 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 OSMRQ99650 979 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 ZFYVE28Q9HCC9 887 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 LATS2Q9NRM7 1088 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 USP21Q9UK80 565 aa8.2□□□□□ -1.1
C11orf88-204ENST00000529661 LOC100996750A0A140TA64 210 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 LINC01387J3KSC0 135 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 PDE2AO00408 941 aaPredicted RBP8.19□□□□□ -1.1
C11orf88-204ENST00000529661 ADAM23O75077 832 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 CITED4Q96RK1 184 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 FAM129BQ96TA1 746 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 ZKSCAN3Q9BRR0 538 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 MUC3BQ9H195 1237 aa8.19□□□□□ -1.1
C11orf88-204ENST00000529661 SH2B1Q9NRF2 756 aaPredicted RBP8.19□□□□□ -1.1
C11orf88-204ENST00000529661 C9orf172C9J069 976 aa8.18□□□□□ -1.1
C11orf88-204ENST00000529661 GPR182O15218 404 aa8.18□□□□□ -1.1
C11orf88-204ENST00000529661 NEFLP07196 543 aa8.18□□□□□ -1.1
C11orf88-204ENST00000529661 GATA4P43694 442 aa8.18□□□□□ -1.1
C11orf88-204ENST00000529661 ORC1Q13415 861 aa8.18□□□□□ -1.1
C11orf88-204ENST00000529661 USPL1Q5W0Q7 1092 aa8.18□□□□□ -1.1
C11orf88-204ENST00000529661 NFKBIEO00221 500 aa8.17□□□□□ -1.1
C11orf88-204ENST00000529661 FURINP09958 794 aa8.17□□□□□ -1.1
C11orf88-204ENST00000529661 EPHA1P21709 976 aa8.17□□□□□ -1.1
C11orf88-204ENST00000529661 MAPK1P28482 360 aa8.17□□□□□ -1.1
C11orf88-204ENST00000529661 SETDB1Q15047 1291 aa8.17□□□□□ -1.1
C11orf88-204ENST00000529661 LENG1Q96BZ8 264 aaPredicted RBP8.17□□□□□ -1.1
C11orf88-204ENST00000529661 NIF3L1Q9GZT8 377 aa8.17□□□□□ -1.1
C11orf88-204ENST00000529661 DCTN4Q9UJW0 460 aa8.17□□□□□ -1.1
C11orf88-204ENST00000529661 NRG1Q02297 640 aaPredicted RBP8.16□□□□□ -1.1
C11orf88-204ENST00000529661 MBTPS1Q14703 1052 aa8.16□□□□□ -1.1
C11orf88-204ENST00000529661 PEAR1Q5VY43 1037 aaPredicted RBP8.16□□□□□ -1.1
C11orf88-204ENST00000529661 FAM117BQ6P1L5 589 aa8.16□□□□□ -1.1
C11orf88-204ENST00000529661 MAP4K3Q8IVH8 894 aa8.16□□□□□ -1.1
C11orf88-204ENST00000529661 CARD10Q9BWT7 1032 aa8.16□□□□□ -1.1
C11orf88-204ENST00000529661 RBCK1Q9BYM8 510 aa8.16□□□□□ -1.1
C11orf88-204ENST00000529661 SRA1Q9HD15 236 aaKnown RBP8.16□□□□□ -1.1
C11orf88-204ENST00000529661 K7ELQ4 463 aaPredicted RBP8.15□□□□□ -1.1
C11orf88-204ENST00000529661 DLL1O00548 723 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 CPNE3O75131 537 aaKnown RBP8.15□□□□□ -1.1
C11orf88-204ENST00000529661 CABP4P57796 275 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 IGF2-ASQ6U949 168 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 TMC7Q7Z402 723 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 TMEM102Q8N9M5 508 aaPredicted RBP8.15□□□□□ -1.1
C11orf88-204ENST00000529661 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 NXPE3Q969Y0 559 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 ADAM19Q9H013 955 aa8.15□□□□□ -1.1
C11orf88-204ENST00000529661 PATL2C9JE40 543 aaKnown RBP8.14□□□□□ -1.11
C11orf88-204ENST00000529661 EIF1AYO14602 144 aaKnown RBP8.14□□□□□ -1.11
C11orf88-204ENST00000529661 DOC2BQ14184 412 aa8.14□□□□□ -1.11
C11orf88-204ENST00000529661 ADGRE1Q14246 886 aa8.14□□□□□ -1.11
C11orf88-204ENST00000529661 GALNT12Q8IXK2 581 aa8.14□□□□□ -1.11
C11orf88-204ENST00000529661 H3BRJ5 948 aa8.13□□□□□ -1.11
C11orf88-204ENST00000529661 FSCN2O14926 492 aa8.13□□□□□ -1.11
C11orf88-204ENST00000529661 IGHA2P01877 340 aa8.13□□□□□ -1.11
C11orf88-204ENST00000529661 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
C11orf88-204ENST00000529661 GALNT11Q8NCW6 608 aa8.13□□□□□ -1.11
C11orf88-204ENST00000529661 DCAF11Q8TEB1 546 aa8.13□□□□□ -1.11
C11orf88-204ENST00000529661 A0A1W2PP55 124 aa8.12□□□□□ -1.11
C11orf88-204ENST00000529661 METTL12A8MUP2 240 aa8.12□□□□□ -1.11
C11orf88-204ENST00000529661 IREB2P48200 963 aaKnown RBP8.12□□□□□ -1.11
C11orf88-204ENST00000529661 SLC7A3Q8WY07 619 aa8.12□□□□□ -1.11
C11orf88-204ENST00000529661 BSNDQ8WZ55 320 aa8.12□□□□□ -1.11
C11orf88-204ENST00000529661 BHLHE41Q9C0J9 482 aaPredicted RBP8.12□□□□□ -1.11
C11orf88-204ENST00000529661 NPHS2Q9NP85 383 aa8.12□□□□□ -1.11
C11orf88-204ENST00000529661 SEC31BQ9NQW1 1179 aa8.12□□□□□ -1.11
C11orf88-204ENST00000529661 SOX13Q9UN79 622 aa8.12□□□□□ -1.11
C11orf88-204ENST00000529661 CD68P34810 354 aaPredicted RBP8.11□□□□□ -1.11
C11orf88-204ENST00000529661 WFDC12Q8WWY7 111 aa8.11□□□□□ -1.11
C11orf88-204ENST00000529661 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
C11orf88-204ENST00000529661 DNAJC25Q9H1X3 360 aa8.11□□□□□ -1.11
C11orf88-204ENST00000529661 LIN7BQ9HAP6 207 aa8.11□□□□□ -1.11
C11orf88-204ENST00000529661 PIP4K2BP78356 416 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 FOXD4L6Q3SYB3 417 aaPredicted RBP8.1□□□□□ -1.11
C11orf88-204ENST00000529661 FOXD4L3Q6VB84 417 aaPredicted RBP8.1□□□□□ -1.11
C11orf88-204ENST00000529661 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 ALKBH8Q96BT7 664 aaKnown RBP8.1□□□□□ -1.11
C11orf88-204ENST00000529661 KLHDC7BQ96G42 594 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 CSRNP1Q96S65 589 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 EHD4Q9H223 541 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 KCNK4Q9NYG8 393 aa8.1□□□□□ -1.11
C11orf88-204ENST00000529661 CCDC9Q9Y3X0 531 aaKnown RBP8.1□□□□□ -1.11
C11orf88-204ENST00000529661 DDX3YO15523 660 aaKnown RBP8.09□□□□□ -1.11
C11orf88-204ENST00000529661 ALX3O95076 343 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms