RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
USF1-209ENST00000529476 KCNJ4P48050 445 aa17.36■□□□□ 0.37
USF1-209ENST00000529476 AOC3Q16853 763 aa17.36■□□□□ 0.37
USF1-209ENST00000529476 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
USF1-209ENST00000529476 TIAM2Q8IVF5 1701 aa17.35■□□□□ 0.37
USF1-209ENST00000529476 PDE8BO95263 885 aa17.35■□□□□ 0.37
USF1-209ENST00000529476 KLRK1P26718 216 aa17.35■□□□□ 0.37
USF1-209ENST00000529476 TFCP2Q12800 502 aa17.35■□□□□ 0.37
USF1-209ENST00000529476 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
USF1-209ENST00000529476 WASHC4Q2M389 1173 aa17.35■□□□□ 0.37
USF1-209ENST00000529476 EYA3Q99504 573 aa17.35■□□□□ 0.37
USF1-209ENST00000529476 CEP126Q9P2H0 1117 aa17.35■□□□□ 0.37
USF1-209ENST00000529476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.35■□□□□ 0.37
USF1-209ENST00000529476 SASH1O94885 1247 aa17.34■□□□□ 0.37
USF1-209ENST00000529476 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
USF1-209ENST00000529476 TXNRD3Q86VQ6 643 aa17.34■□□□□ 0.37
USF1-209ENST00000529476 LARGE2Q8N3Y3 721 aa17.34■□□□□ 0.37
USF1-209ENST00000529476 MED23Q9ULK4 1368 aa17.33■□□□□ 0.36
USF1-209ENST00000529476 UBE4AQ14139 1066 aa17.33■□□□□ 0.36
USF1-209ENST00000529476 ZC3H12CQ9C0D7 883 aaKnown RBP17.33■□□□□ 0.36
USF1-209ENST00000529476 VPS33BQ9H267 617 aa17.33■□□□□ 0.36
USF1-209ENST00000529476 IRS2Q9Y4H2 1338 aa17.32■□□□□ 0.36
USF1-209ENST00000529476 FGFR2P21802 821 aa17.32■□□□□ 0.36
USF1-209ENST00000529476 PUM3Q15397 648 aaKnown RBP17.32■□□□□ 0.36
USF1-209ENST00000529476 APBB1O00213 710 aa17.31■□□□□ 0.36
USF1-209ENST00000529476 ATP2B3Q16720 1220 aa17.31■□□□□ 0.36
USF1-209ENST00000529476 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
USF1-209ENST00000529476 HSP90AB4PQ58FF6 505 aa17.31■□□□□ 0.36
USF1-209ENST00000529476 NIM1KQ8IY84 436 aa17.31■□□□□ 0.36
USF1-209ENST00000529476 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
USF1-209ENST00000529476 NEFLP07196 543 aa17.3■□□□□ 0.36
USF1-209ENST00000529476 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
USF1-209ENST00000529476 HDAC1Q13547 482 aaPredicted RBP17.3■□□□□ 0.36
USF1-209ENST00000529476 C15orf52Q6ZUT6 534 aaKnown RBP17.3■□□□□ 0.36
USF1-209ENST00000529476 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
USF1-209ENST00000529476 LPIN2Q92539 896 aa17.3■□□□□ 0.36
USF1-209ENST00000529476 DCTPP1Q9H773 170 aa17.3■□□□□ 0.36
USF1-209ENST00000529476 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
USF1-209ENST00000529476 GLTPD2A6NH11 291 aa17.29■□□□□ 0.36
USF1-209ENST00000529476 SLC5A1P13866 664 aa17.29■□□□□ 0.36
USF1-209ENST00000529476 GYG1P46976 350 aa17.29■□□□□ 0.36
USF1-209ENST00000529476 ERC1Q8IUD2 1116 aa17.29■□□□□ 0.36
USF1-209ENST00000529476 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
USF1-209ENST00000529476 AKAP2Q9Y2D5 859 aa17.29■□□□□ 0.36
USF1-209ENST00000529476 ZNF609O15014 1411 aa17.29■□□□□ 0.36
USF1-209ENST00000529476 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 A0A1B0GUL7 405 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 G3V3G9 751 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 ECE2O60344 883 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 RAB11FIP3O75154 756 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 IGHDP01880 384 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 IFIT1P09914 478 aaKnown RBP17.28■□□□□ 0.36
USF1-209ENST00000529476 TIMM10P62072 90 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 ZNRF3Q9ULT6 936 aa17.28■□□□□ 0.36
USF1-209ENST00000529476 YDJCA8MPS7 323 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 POTECB2RU33 542 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 FZD9O00144 591 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 ADORA1P30542 326 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 TNNI3KQ59H18 835 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 KIF1BPQ96EK5 621 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.36
USF1-209ENST00000529476 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 COA1Q9GZY4 146 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.36
USF1-209ENST00000529476 IL1RAPL2Q9NP60 686 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 FPGT-TNNI3KV9GXZ4 949 aa17.27■□□□□ 0.36
USF1-209ENST00000529476 ZNF541Q9H0D2 1346 aa17.26■□□□□ 0.35
USF1-209ENST00000529476 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
USF1-209ENST00000529476 FOXN1O15353 648 aa17.26■□□□□ 0.35
USF1-209ENST00000529476 BCAMP50895 628 aa17.26■□□□□ 0.35
USF1-209ENST00000529476 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
USF1-209ENST00000529476 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
USF1-209ENST00000529476 KCNQ5Q9NR82 932 aa17.26■□□□□ 0.35
USF1-209ENST00000529476 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
USF1-209ENST00000529476 HIBADHP31937 336 aaKnown RBP17.25■□□□□ 0.35
USF1-209ENST00000529476 CAVIN4Q5BKX8 364 aa17.25■□□□□ 0.35
USF1-209ENST00000529476 FBXO33Q7Z6M2 555 aa17.25■□□□□ 0.35
USF1-209ENST00000529476 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
USF1-209ENST00000529476 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
USF1-209ENST00000529476 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
USF1-209ENST00000529476 MKRN1Q9UHC7 482 aaKnown RBP17.25■□□□□ 0.35
USF1-209ENST00000529476 PSME4Q14997 1843 aa17.25■□□□□ 0.35
USF1-209ENST00000529476 RAD17O75943 681 aa17.24■□□□□ 0.35
USF1-209ENST00000529476 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
USF1-209ENST00000529476 CXCL9Q07325 125 aa17.24■□□□□ 0.35
USF1-209ENST00000529476 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
USF1-209ENST00000529476 AACSQ86V21 672 aa17.24■□□□□ 0.35
USF1-209ENST00000529476 VPS37DQ86XT2 251 aa17.24■□□□□ 0.35
USF1-209ENST00000529476 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
USF1-209ENST00000529476 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
USF1-209ENST00000529476 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
USF1-209ENST00000529476 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
USF1-209ENST00000529476 IL1R1P14778 569 aa17.23■□□□□ 0.35
USF1-209ENST00000529476 PHKA1P46020 1223 aa17.23■□□□□ 0.35
USF1-209ENST00000529476 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
USF1-209ENST00000529476 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
USF1-209ENST00000529476 DBNDD2Q9BQY9 259 aa17.23■□□□□ 0.35
USF1-209ENST00000529476 TLR7Q9NYK1 1049 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms