RNA–Protein interactions for RNA: ENST00000527662.5

CSRP1-211, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 4,208 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-211ENST00000527662 CHMLP26374 656 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 NAT10Q9H0A0 1025 aaKnown RBP9.34□□□□□ -0.91
CSRP1-211ENST00000527662 R3HCC1Q9Y3T6 440 aaKnown RBP9.34□□□□□ -0.91
CSRP1-211ENST00000527662 RAD17O75943 681 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 EPHA10Q5JZY3 1008 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 SLC9C2Q5TAH2 1124 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 SCAND2PQ9GZW5 306 aaPredicted RBP9.34□□□□□ -0.91
CSRP1-211ENST00000527662 HMG20BQ9P0W2 317 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 SYNE3Q6ZMZ3 975 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 CCDC82Q8N4S0 544 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 OSBPL3Q9H4L5 887 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 CFAP45Q9UL16 551 aa9.34□□□□□ -0.91
CSRP1-211ENST00000527662 KDRP35968 1356 aa9.34□□□□□ -0.92
CSRP1-211ENST00000527662 RRP9O43818 475 aaKnown RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 CYP7A1P22680 504 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 BCAMP50895 628 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 EIF5P55010 431 aaKnown RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 STK3Q13188 491 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 SLC4A9Q96Q91 983 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 PDGFDQ9GZP0 370 aaPredicted RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 STX6O43752 255 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 PCCAP05165 728 aaPredicted RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 HMGB1P09429 215 aaKnown RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 HIBADHP31937 336 aaKnown RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 SCNN1DP51172 638 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 UBE2HP62256 183 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 TRIM29Q14134 588 aa9.33□□□□□ -0.92
CSRP1-211ENST00000527662 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
CSRP1-211ENST00000527662 ERICH2A1L162 156 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 GSPT1P15170 499 aaKnown RBP9.32□□□□□ -0.92
CSRP1-211ENST00000527662 ZNF804AQ7Z570 1209 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 CELF1Q92879 486 aaKnown RBP9.32□□□□□ -0.92
CSRP1-211ENST00000527662 NACAP1Q9BZK3 213 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 CTNNA3Q9UI47 895 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 PXDNQ92626 1479 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 ZNF445P59923 1031 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 NUP62CLQ9H1M0 184 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 HOOK1Q9UJC3 728 aaKnown RBP9.32□□□□□ -0.92
CSRP1-211ENST00000527662 RAD50Q92878 1312 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 TCP10Q12799 353 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 RAB11FIP4Q86YS3 637 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 NUP133Q8WUM0 1156 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 XAGE2Q96GT9 111 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 U3KPZ7 1027 aaPredicted RBP9.32□□□□□ -0.92
CSRP1-211ENST00000527662 KINO60870 393 aaKnown RBP9.32□□□□□ -0.92
CSRP1-211ENST00000527662 CHRNDQ07001 517 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 OLFM4Q6UX06 510 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 CCDC83Q8IWF9 413 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 CCAR1Q8IX12 1150 aaKnown RBP9.32□□□□□ -0.92
CSRP1-211ENST00000527662 TNMDQ9H2S6 317 aa9.32□□□□□ -0.92
CSRP1-211ENST00000527662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 ZSCAN22P10073 491 aaPredicted RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 PI16Q6UXB8 463 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 TTLL6Q8N841 843 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 CNKSR1Q969H4 720 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 SPATA32Q96LK8 384 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 EYA3Q99504 573 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 PANK2Q9BZ23 570 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 NAPBQ9H115 298 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 MKNK2Q9HBH9 465 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 ADGRB2O60241 1585 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 FSD2A1L4K1 749 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 MAP3K11Q16584 847 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 NAA16Q6N069 864 aaPredicted RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 INTS5Q6P9B9 1019 aaKnown RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 ATP2B1P20020 1258 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 DALRD3Q5D0E6 543 aaKnown RBP9.31□□□□□ -0.92
CSRP1-211ENST00000527662 WDR78Q5VTH9 848 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 NIM1KQ8IY84 436 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 TCEANC2Q96MN5 208 aa9.31□□□□□ -0.92
CSRP1-211ENST00000527662 ZSCAN25Q6NSZ9 544 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 MAGEB6Q8N7X4 407 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 ANKRD2Q9GZV1 360 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 NRXN3Q9Y4C0 1643 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
CSRP1-211ENST00000527662 PPEF1O14829 653 aaPredicted RBP9.3□□□□□ -0.92
CSRP1-211ENST00000527662 CAVIN2O95810 425 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 ADORA1P30542 326 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 ZNF827Q17R98 1081 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 TTLL11Q8NHH1 800 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 ZNF277Q9NRM2 450 aaPredicted RBP9.3□□□□□ -0.92
CSRP1-211ENST00000527662 FAM13BQ9NYF5 915 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 IFT172Q9UG01 1749 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 ERVV-1B6SEH8 477 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
CSRP1-211ENST00000527662 TRIM5Q9C035 493 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 PIM2Q9P1W9 311 aa9.3□□□□□ -0.92
CSRP1-211ENST00000527662 LDHBP07195 334 aaKnown RBP9.29□□□□□ -0.92
CSRP1-211ENST00000527662 PUM3Q15397 648 aaKnown RBP9.29□□□□□ -0.92
CSRP1-211ENST00000527662 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
CSRP1-211ENST00000527662 TTLL5Q6EMB2 1281 aa9.29□□□□□ -0.92
CSRP1-211ENST00000527662 DDX19AQ9NUU7 478 aaKnown RBP9.29□□□□□ -0.92
CSRP1-211ENST00000527662 STAP2Q9UGK3 403 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms