RNA–Protein interactions for RNA: ENST00000526944.1

ME3-207, Transcript of malic enzyme 3, humanhuman

TSL 3

Gene ME3, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-207ENST00000526944 RBM46Q8TBY0 533 aaKnown RBP28.24■■■□□ 2.11
ME3-207ENST00000526944 SIL1Q9H173 461 aa28.24■■■□□ 2.11
ME3-207ENST00000526944 SNAP23O00161 211 aa28.23■■■□□ 2.11
ME3-207ENST00000526944 EPHX2P34913 555 aa28.23■■■□□ 2.11
ME3-207ENST00000526944 SCNN1DP51172 638 aa28.23■■■□□ 2.11
ME3-207ENST00000526944 PNMA8AQ86V59 439 aaPredicted RBP28.23■■■□□ 2.11
ME3-207ENST00000526944 TXNRD3Q86VQ6 643 aa28.23■■■□□ 2.11
ME3-207ENST00000526944 TAF1DQ9H5J8 278 aaPredicted RBP28.23■■■□□ 2.11
ME3-207ENST00000526944 COG6Q9Y2V7 657 aa28.23■■■□□ 2.11
ME3-207ENST00000526944 RPS12P25398 132 aaKnown RBP28.22■■■□□ 2.11
ME3-207ENST00000526944 KLRK1P26718 216 aa28.22■■■□□ 2.11
ME3-207ENST00000526944 IL15P40933 162 aaPredicted RBP28.22■■■□□ 2.11
ME3-207ENST00000526944 GMPSP49915 693 aaPredicted RBP28.22■■■□□ 2.11
ME3-207ENST00000526944 USP17L3A6NCW0 530 aa28.21■■■□□ 2.11
ME3-207ENST00000526944 USP17L4A6NCW7 530 aa28.21■■■□□ 2.11
ME3-207ENST00000526944 USP17L1Q7RTZ2 530 aa28.21■■■□□ 2.11
ME3-207ENST00000526944 KCNQ5Q9NR82 932 aa28.21■■■□□ 2.11
ME3-207ENST00000526944 GPRC5DQ9NZD1 345 aa28.21■■■□□ 2.11
ME3-207ENST00000526944 VIL1P09327 827 aaKnown RBP28.2■■■□□ 2.1
ME3-207ENST00000526944 SMC1BQ8NDV3 1235 aa28.2■■■□□ 2.1
ME3-207ENST00000526944 DPF2Q92785 391 aa28.2■■■□□ 2.1
ME3-207ENST00000526944 CEP126Q9P2H0 1117 aa28.2■■■□□ 2.1
ME3-207ENST00000526944 PA2G4Q9UQ80 394 aaKnown RBP28.2■■■□□ 2.1
ME3-207ENST00000526944 ATP8B2P98198 1209 aa28.19■■■□□ 2.1
ME3-207ENST00000526944 PUM3Q15397 648 aaKnown RBP28.19■■■□□ 2.1
ME3-207ENST00000526944 ATG9AQ7Z3C6 839 aa28.19■■■□□ 2.1
ME3-207ENST00000526944 VGLL2Q8N8G2 317 aa28.19■■■□□ 2.1
ME3-207ENST00000526944 C1orf115Q9H7X2 142 aa28.19■■■□□ 2.1
ME3-207ENST00000526944 CD209Q9NNX6 404 aa28.19■■■□□ 2.1
ME3-207ENST00000526944 IRS2Q9Y4H2 1338 aa28.18■■■□□ 2.1
ME3-207ENST00000526944 IFIT1P09914 478 aaKnown RBP28.18■■■□□ 2.1
ME3-207ENST00000526944 FSTL1Q12841 308 aa28.18■■■□□ 2.1
ME3-207ENST00000526944 EAPPQ56P03 285 aaPredicted RBP28.18■■■□□ 2.1
ME3-207ENST00000526944 FBXW7Q969H0 707 aa28.18■■■□□ 2.1
ME3-207ENST00000526944 ZBTB12Q9Y330 459 aaPredicted RBP28.18■■■□□ 2.1
ME3-207ENST00000526944 SCN9AQ15858 1988 aa28.18■■■□□ 2.1
ME3-207ENST00000526944 PNMA6EA0A0J9YXQ4 647 aa28.17■■■□□ 2.1
ME3-207ENST00000526944 H7C1D1 291 aa28.17■■■□□ 2.1
ME3-207ENST00000526944 EPS15P42566 896 aa28.17■■■□□ 2.1
ME3-207ENST00000526944 CAVIN4Q5BKX8 364 aa28.17■■■□□ 2.1
ME3-207ENST00000526944 STRIP1Q5VSL9 837 aa28.17■■■□□ 2.1
ME3-207ENST00000526944 RSBN1LQ6PCB5 846 aaPredicted RBP28.17■■■□□ 2.1
ME3-207ENST00000526944 VPS37DQ86XT2 251 aa28.17■■■□□ 2.1
ME3-207ENST00000526944 ADARB2Q9NS39 739 aaKnown RBP28.17■■■□□ 2.1
ME3-207ENST00000526944 CNOT7Q9UIV1 285 aaKnown RBP28.17■■■□□ 2.1
ME3-207ENST00000526944 PSME4Q14997 1843 aa28.17■■■□□ 2.1
ME3-207ENST00000526944 HIBADHP31937 336 aaKnown RBP28.16■■■□□ 2.1
ME3-207ENST00000526944 USP50Q70EL3 339 aaPredicted RBP28.16■■■□□ 2.1
ME3-207ENST00000526944 LDHDQ86WU2 507 aa28.16■■■□□ 2.1
ME3-207ENST00000526944 AGBL3Q8NEM8 1001 aa28.16■■■□□ 2.1
ME3-207ENST00000526944 SLC5A1P13866 664 aa28.15■■■□□ 2.1
ME3-207ENST00000526944 G3BP1Q13283 466 aaKnown RBP eCLIP28.15■■■□□ 2.1
ME3-207ENST00000526944 TTLL5Q6EMB2 1281 aa28.15■■■□□ 2.1
ME3-207ENST00000526944 LPIN2Q92539 896 aa28.15■■■□□ 2.1
ME3-207ENST00000526944 CLEC11AQ9Y240 323 aa28.15■■■□□ 2.1
ME3-207ENST00000526944 MYO3BQ8WXR4 1341 aa28.15■■■□□ 2.1
ME3-207ENST00000526944 IL1R1P14778 569 aa28.14■■■□□ 2.1
ME3-207ENST00000526944 POLA2Q14181 598 aa28.14■■■□□ 2.1
ME3-207ENST00000526944 C20orf194Q5TEA3 1177 aa28.14■■■□□ 2.1
ME3-207ENST00000526944 MICALL2Q8IY33 904 aa28.14■■■□□ 2.1
ME3-207ENST00000526944 SSH3Q8TE77 659 aa28.14■■■□□ 2.1
ME3-207ENST00000526944 ZNF609O15014 1411 aa28.13■■■□□ 2.09
ME3-207ENST00000526944 GYG1P46976 350 aa28.13■■■□□ 2.09
ME3-207ENST00000526944 RRP1P56182 461 aaKnown RBP28.13■■■□□ 2.09
ME3-207ENST00000526944 CHADLQ6NUI6 762 aa28.13■■■□□ 2.09
ME3-207ENST00000526944 FAM84BQ96KN1 310 aaPredicted RBP28.13■■■□□ 2.09
ME3-207ENST00000526944 ZBTB40Q9NUA8 1239 aa28.13■■■□□ 2.09
ME3-207ENST00000526944 FGFR2P21802 821 aa28.12■■■□□ 2.09
ME3-207ENST00000526944 GTF2IP78347 998 aa28.12■■■□□ 2.09
ME3-207ENST00000526944 ATP2B3Q16720 1220 aa28.12■■■□□ 2.09
ME3-207ENST00000526944 CEP85Q6P2H3 762 aa28.12■■■□□ 2.09
ME3-207ENST00000526944 DACT2Q5SW24 774 aa28.11■■■□□ 2.09
ME3-207ENST00000526944 AKAP2Q9Y2D5 859 aa28.11■■■□□ 2.09
ME3-207ENST00000526944 OS9Q13438 667 aaPredicted RBP28.1■■■□□ 2.09
ME3-207ENST00000526944 FBXO33Q7Z6M2 555 aa28.1■■■□□ 2.09
ME3-207ENST00000526944 RPAP2Q8IXW5 612 aaPredicted RBP28.1■■■□□ 2.09
ME3-207ENST00000526944 FRAT2O75474 233 aaPredicted RBP28.09■■■□□ 2.09
ME3-207ENST00000526944 SASH1O94885 1247 aa28.09■■■□□ 2.09
ME3-207ENST00000526944 USP17L8P0C7I0 530 aa28.09■■■□□ 2.09
ME3-207ENST00000526944 POTEIP0CG38 1075 aa28.09■■■□□ 2.09
ME3-207ENST00000526944 POTEJP0CG39 1038 aa28.09■■■□□ 2.09
ME3-207ENST00000526944 OGFOD1Q8N543 542 aa28.09■■■□□ 2.09
ME3-207ENST00000526944 TDRD7Q8NHU6 1098 aaKnown RBP28.09■■■□□ 2.09
ME3-207ENST00000526944 SURF6O75683 361 aaKnown RBP28.08■■■□□ 2.09
ME3-207ENST00000526944 MMP14P50281 582 aa28.08■■■□□ 2.09
ME3-207ENST00000526944 GMLQ99445 158 aa28.08■■■□□ 2.09
ME3-207ENST00000526944 HMMRO75330 724 aa28.07■■■□□ 2.08
ME3-207ENST00000526944 TFCP2Q12800 502 aa28.07■■■□□ 2.08
ME3-207ENST00000526944 BCAMP50895 628 aa28.06■■■□□ 2.08
ME3-207ENST00000526944 FKBP1AP62942 108 aaKnown RBP28.06■■■□□ 2.08
ME3-207ENST00000526944 ADAMTSL1Q8N6G6 1762 aa28.05■■■□□ 2.08
ME3-207ENST00000526944 ZC3H15Q8WU90 426 aaKnown RBP28.05■■■□□ 2.08
ME3-207ENST00000526944 GNL3LQ9NVN8 582 aaKnown RBP28.05■■■□□ 2.08
ME3-207ENST00000526944 HDAC9Q9UKV0 1011 aa28.05■■■□□ 2.08
ME3-207ENST00000526944 NOP58Q9Y2X3 529 aaKnown RBP28.05■■■□□ 2.08
ME3-207ENST00000526944 FAM205AQ6ZU69 1335 aa28.04■■■□□ 2.08
ME3-207ENST00000526944 SHTN1A0MZ66 631 aa28.04■■■□□ 2.08
ME3-207ENST00000526944 ZNF280AP59817 542 aaPredicted RBP28.04■■■□□ 2.08
ME3-207ENST00000526944 TBC1D10BQ4KMP7 808 aaPredicted RBP28.04■■■□□ 2.08
ME3-207ENST00000526944 SAMD7Q7Z3H4 446 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms