RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 SASH1O94885 1247 aa25.65■■□□□ 1.7
CD44-222ENST00000526025 IFIT1P09914 478 aaKnown RBP25.65■■□□□ 1.7
CD44-222ENST00000526025 SLC5A1P13866 664 aa25.65■■□□□ 1.7
CD44-222ENST00000526025 OS9Q13438 667 aaPredicted RBP25.65■■□□□ 1.7
CD44-222ENST00000526025 HDAC1Q13547 482 aaPredicted RBP25.65■■□□□ 1.7
CD44-222ENST00000526025 SCN9AQ15858 1988 aa25.65■■□□□ 1.7
CD44-222ENST00000526025 SNAP23O00161 211 aa25.64■■□□□ 1.7
CD44-222ENST00000526025 TFCP2Q12800 502 aa25.64■■□□□ 1.7
CD44-222ENST00000526025 ATP2B3Q16720 1220 aa25.64■■□□□ 1.7
CD44-222ENST00000526025 PODNQ7Z5L7 613 aa25.64■■□□□ 1.7
CD44-222ENST00000526025 ZNF609O15014 1411 aa25.63■■□□□ 1.69
CD44-222ENST00000526025 KLRK1P26718 216 aa25.63■■□□□ 1.69
CD44-222ENST00000526025 ZNF804AQ7Z570 1209 aa25.63■■□□□ 1.69
CD44-222ENST00000526025 TXNRD3Q86VQ6 643 aa25.63■■□□□ 1.69
CD44-222ENST00000526025 DCTPP1Q9H773 170 aa25.63■■□□□ 1.69
CD44-222ENST00000526025 EXOC6BQ9Y2D4 811 aa25.63■■□□□ 1.69
CD44-222ENST00000526025 ZNF646O15015 1829 aaPredicted RBP25.63■■□□□ 1.69
CD44-222ENST00000526025 ZBTB22O15209 634 aa25.62■■□□□ 1.69
CD44-222ENST00000526025 ECE2O60344 883 aa25.62■■□□□ 1.69
CD44-222ENST00000526025 IRX6P78412 446 aaPredicted RBP25.62■■□□□ 1.69
CD44-222ENST00000526025 MYH13Q9UKX3 1938 aa25.62■■□□□ 1.69
CD44-222ENST00000526025 G3V3G9 751 aa25.61■■□□□ 1.69
CD44-222ENST00000526025 EIF6P56537 245 aaKnown RBP25.61■■□□□ 1.69
CD44-222ENST00000526025 DCAF8Q5TAQ9 597 aa25.61■■□□□ 1.69
CD44-222ENST00000526025 KIF1BPQ96EK5 621 aa25.61■■□□□ 1.69
CD44-222ENST00000526025 DBNDD1Q9H9R9 158 aa25.61■■□□□ 1.69
CD44-222ENST00000526025 YDJCA8MPS7 323 aa25.6■■□□□ 1.69
CD44-222ENST00000526025 IL1R1P14778 569 aa25.6■■□□□ 1.69
CD44-222ENST00000526025 CAVIN4Q5BKX8 364 aa25.6■■□□□ 1.69
CD44-222ENST00000526025 FBXO33Q7Z6M2 555 aa25.6■■□□□ 1.69
CD44-222ENST00000526025 FAM84BQ96KN1 310 aaPredicted RBP25.6■■□□□ 1.69
CD44-222ENST00000526025 A0A1B0GUL7 405 aa25.59■■□□□ 1.69
CD44-222ENST00000526025 HIBADHP31937 336 aaKnown RBP25.59■■□□□ 1.69
CD44-222ENST00000526025 DOK7Q18PE1 504 aa25.59■■□□□ 1.69
CD44-222ENST00000526025 DPY19L2Q6NUT2 758 aa25.59■■□□□ 1.69
CD44-222ENST00000526025 RHPN1Q8TCX5 695 aa25.59■■□□□ 1.69
CD44-222ENST00000526025 CD209Q9NNX6 404 aa25.59■■□□□ 1.69
CD44-222ENST00000526025 WDR90Q96KV7 1748 aa25.59■■□□□ 1.69
CD44-222ENST00000526025 GLTPD2A6NH11 291 aa25.58■■□□□ 1.69
CD44-222ENST00000526025 TNNI3KQ59H18 835 aa25.58■■□□□ 1.69
CD44-222ENST00000526025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.58■■□□□ 1.69
CD44-222ENST00000526025 FPGT-TNNI3KV9GXZ4 949 aa25.58■■□□□ 1.69
CD44-222ENST00000526025 ZNF541Q9H0D2 1346 aa25.58■■□□□ 1.69
CD44-222ENST00000526025 CXCL9Q07325 125 aa25.57■■□□□ 1.68
CD44-222ENST00000526025 TNIP1Q15025 636 aa25.57■■□□□ 1.68
CD44-222ENST00000526025 GPC2Q8N158 579 aa25.57■■□□□ 1.68
CD44-222ENST00000526025 RWDD1Q9H446 243 aaPredicted RBP25.57■■□□□ 1.68
CD44-222ENST00000526025 SCN4AP35499 1836 aa25.56■■□□□ 1.68
CD44-222ENST00000526025 YY1P25490 414 aa25.56■■□□□ 1.68
CD44-222ENST00000526025 GYG1P46976 350 aa25.56■■□□□ 1.68
CD44-222ENST00000526025 CIAPIN1Q6FI81 312 aa25.56■■□□□ 1.68
CD44-222ENST00000526025 TDRD7Q8NHU6 1098 aaKnown RBP25.56■■□□□ 1.68
CD44-222ENST00000526025 GCC1Q96CN9 775 aa25.56■■□□□ 1.68
CD44-222ENST00000526025 KDM2BQ8NHM5 1336 aa25.56■■□□□ 1.68
CD44-222ENST00000526025 NEFLP07196 543 aa25.55■■□□□ 1.68
CD44-222ENST00000526025 VPS37DQ86XT2 251 aa25.55■■□□□ 1.68
CD44-222ENST00000526025 XAGE2Q96GT9 111 aa25.55■■□□□ 1.68
CD44-222ENST00000526025 LRRCC1Q9C099 1032 aa25.55■■□□□ 1.68
CD44-222ENST00000526025 TIMM10P62072 90 aa25.54■■□□□ 1.68
CD44-222ENST00000526025 L3MBTL3Q96JM7 780 aaPredicted RBP25.54■■□□□ 1.68
CD44-222ENST00000526025 USP17L3A6NCW0 530 aa25.53■■□□□ 1.68
CD44-222ENST00000526025 USP17L4A6NCW7 530 aa25.53■■□□□ 1.68
CD44-222ENST00000526025 BCAMP50895 628 aa25.53■■□□□ 1.68
CD44-222ENST00000526025 STRIP1Q5VSL9 837 aa25.53■■□□□ 1.68
CD44-222ENST00000526025 USP17L1Q7RTZ2 530 aa25.53■■□□□ 1.68
CD44-222ENST00000526025 CLASRPQ8N2M8 674 aaKnown RBP25.53■■□□□ 1.68
CD44-222ENST00000526025 GNL3LQ9NVN8 582 aaKnown RBP25.53■■□□□ 1.68
CD44-222ENST00000526025 SEMA3EO15041 775 aa25.52■■□□□ 1.68
CD44-222ENST00000526025 VIL1P09327 827 aaKnown RBP25.52■■□□□ 1.68
CD44-222ENST00000526025 EAF2Q96CJ1 260 aaPredicted RBP25.52■■□□□ 1.68
CD44-222ENST00000526025 NEUROD6Q96NK8 337 aa25.52■■□□□ 1.68
CD44-222ENST00000526025 FAM205AQ6ZU69 1335 aa25.52■■□□□ 1.68
CD44-222ENST00000526025 PSMD14O00487 310 aa25.51■■□□□ 1.67
CD44-222ENST00000526025 RAD17O75943 681 aa25.51■■□□□ 1.67
CD44-222ENST00000526025 RPS12P25398 132 aaKnown RBP25.51■■□□□ 1.67
CD44-222ENST00000526025 ADORA1P30542 326 aa25.51■■□□□ 1.67
CD44-222ENST00000526025 FKBP1AP62942 108 aaKnown RBP25.51■■□□□ 1.67
CD44-222ENST00000526025 CCDC102BQ68D86 513 aa25.51■■□□□ 1.67
CD44-222ENST00000526025 MYO3BQ8WXR4 1341 aa25.51■■□□□ 1.67
CD44-222ENST00000526025 DDNO94850 711 aaPredicted RBP25.5■■□□□ 1.67
CD44-222ENST00000526025 PDS5AQ29RF7 1337 aaKnown RBP25.5■■□□□ 1.67
CD44-222ENST00000526025 SMC5Q8IY18 1101 aa25.5■■□□□ 1.67
CD44-222ENST00000526025 KCNQ5Q9NR82 932 aa25.5■■□□□ 1.67
CD44-222ENST00000526025 PHKA1P46020 1223 aa25.49■■□□□ 1.67
CD44-222ENST00000526025 DACT2Q5SW24 774 aa25.49■■□□□ 1.67
CD44-222ENST00000526025 ERICH6BQ5W0A0 696 aa25.49■■□□□ 1.67
CD44-222ENST00000526025 TTLL5Q6EMB2 1281 aa25.49■■□□□ 1.67
CD44-222ENST00000526025 AACSQ86V21 672 aa25.49■■□□□ 1.67
CD44-222ENST00000526025 ZNF512BQ96KM6 892 aaPredicted RBP25.49■■□□□ 1.67
CD44-222ENST00000526025 IL1RAPL2Q9NP60 686 aa25.49■■□□□ 1.67
CD44-222ENST00000526025 DBNLQ9UJU6 430 aaKnown RBP25.49■■□□□ 1.67
CD44-222ENST00000526025 AKAP11Q9UKA4 1901 aa25.49■■□□□ 1.67
CD44-222ENST00000526025 APBB1O00213 710 aa25.48■■□□□ 1.67
CD44-222ENST00000526025 GORABQ5T7V8 394 aa25.48■■□□□ 1.67
CD44-222ENST00000526025 RSBN1LQ6PCB5 846 aaPredicted RBP25.48■■□□□ 1.67
CD44-222ENST00000526025 AGBL3Q8NEM8 1001 aa25.48■■□□□ 1.67
CD44-222ENST00000526025 DPF2Q92785 391 aa25.48■■□□□ 1.67
CD44-222ENST00000526025 DBNDD2Q9BQY9 259 aa25.48■■□□□ 1.67
CD44-222ENST00000526025 IGHDP01880 384 aa25.47■■□□□ 1.67
CD44-222ENST00000526025 UQCRFS1P1P0C7P4 283 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms