RNA–Protein interactions for RNA: ENST00000524478.1

MMP3-203, Transcript of matrix metallopeptidase 3, humanhuman

TSL 4

Gene MMP3, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-203ENST00000524478 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
MMP3-203ENST00000524478 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
MMP3-203ENST00000524478 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
MMP3-203ENST00000524478 TM4SF4P48230 202 aa12.34□□□□□ -0.43
MMP3-203ENST00000524478 TRIM28Q13263 835 aaKnown RBP12.34□□□□□ -0.43
MMP3-203ENST00000524478 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
MMP3-203ENST00000524478 XDHP47989 1333 aa12.34□□□□□ -0.43
MMP3-203ENST00000524478 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 SASH1O94885 1247 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 HOXB7P09629 217 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 PTPN12Q05209 780 aaKnown RBP12.33□□□□□ -0.44
MMP3-203ENST00000524478 LMOD3Q0VAK6 560 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 DACT2Q5SW24 774 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
MMP3-203ENST00000524478 CCDC85AQ96PX6 553 aaPredicted RBP12.33□□□□□ -0.44
MMP3-203ENST00000524478 PRKRIP1Q9H875 184 aaPredicted RBP12.33□□□□□ -0.44
MMP3-203ENST00000524478 DBF4Q9UBU7 674 aaPredicted RBP12.33□□□□□ -0.44
MMP3-203ENST00000524478 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
MMP3-203ENST00000524478 ARAP2Q8WZ64 1704 aa12.33□□□□□ -0.44
MMP3-203ENST00000524478 WNT10BO00744 389 aa12.32□□□□□ -0.44
MMP3-203ENST00000524478 FKTNO75072 461 aa12.32□□□□□ -0.44
MMP3-203ENST00000524478 CAP1Q01518 475 aa12.32□□□□□ -0.44
MMP3-203ENST00000524478 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
MMP3-203ENST00000524478 FZD1Q9UP38 647 aa12.32□□□□□ -0.44
MMP3-203ENST00000524478 COL1A1P02452 1464 aaPredicted RBP12.32□□□□□ -0.44
MMP3-203ENST00000524478 SREBF2Q12772 1141 aa12.31□□□□□ -0.44
MMP3-203ENST00000524478 TTLL12Q14166 644 aaPredicted RBP12.31□□□□□ -0.44
MMP3-203ENST00000524478 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
MMP3-203ENST00000524478 GCC1Q96CN9 775 aa12.31□□□□□ -0.44
MMP3-203ENST00000524478 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
MMP3-203ENST00000524478 G3V3G9 751 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 PCCAP05165 728 aaPredicted RBP12.3□□□□□ -0.44
MMP3-203ENST00000524478 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
MMP3-203ENST00000524478 KLRK1P26718 216 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 FXR1P51114 621 aaKnown RBP eCLIP12.3□□□□□ -0.44
MMP3-203ENST00000524478 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 CCDC152Q4G0S7 254 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 LDLRAD1Q5T700 205 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 DUSP27Q5VZP5 1158 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 TXNRD3Q86VQ6 643 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 ZBED3Q96IU2 234 aaPredicted RBP12.3□□□□□ -0.44
MMP3-203ENST00000524478 MYD88Q99836 296 aa12.3□□□□□ -0.44
MMP3-203ENST00000524478 IGF2BP3O00425 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
MMP3-203ENST00000524478 PRKG1Q13976 671 aa12.29□□□□□ -0.44
MMP3-203ENST00000524478 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
MMP3-203ENST00000524478 PHAXQ9H814 394 aaKnown RBP12.29□□□□□ -0.44
MMP3-203ENST00000524478 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
MMP3-203ENST00000524478 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
MMP3-203ENST00000524478 LAS1LQ9Y4W2 734 aaKnown RBP12.29□□□□□ -0.44
MMP3-203ENST00000524478 TRIM17Q9Y577 477 aa12.29□□□□□ -0.44
MMP3-203ENST00000524478 AOX1Q06278 1338 aa12.29□□□□□ -0.44
MMP3-203ENST00000524478 PDE8AO60658 829 aa12.28□□□□□ -0.44
MMP3-203ENST00000524478 ATP2B4P23634 1241 aa12.28□□□□□ -0.44
MMP3-203ENST00000524478 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
MMP3-203ENST00000524478 RALBP1Q15311 655 aa12.28□□□□□ -0.44
MMP3-203ENST00000524478 IFNL1Q8IU54 200 aa12.28□□□□□ -0.44
MMP3-203ENST00000524478 ANKRD18AQ8IVF6 992 aa12.28□□□□□ -0.44
MMP3-203ENST00000524478 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
MMP3-203ENST00000524478 GJA5P36382 358 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 CTSWP56202 376 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 RIC3Q7Z5B4 369 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 APOBEC3FQ8IUX4 373 aaKnown RBP12.27□□□□□ -0.45
MMP3-203ENST00000524478 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 FBXW7Q969H0 707 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 WNK4Q96J92 1243 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 GREM2Q9H772 168 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 ANGEL1Q9UNK9 670 aaKnown RBP12.27□□□□□ -0.45
MMP3-203ENST00000524478 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 MYO3BQ8WXR4 1341 aa12.27□□□□□ -0.45
MMP3-203ENST00000524478 NF2P35240 595 aa12.26□□□□□ -0.45
MMP3-203ENST00000524478 CCT4P50991 539 aaKnown RBP12.26□□□□□ -0.45
MMP3-203ENST00000524478 STRIP1Q5VSL9 837 aa12.26□□□□□ -0.45
MMP3-203ENST00000524478 ARMC9Q7Z3E5 817 aa12.26□□□□□ -0.45
MMP3-203ENST00000524478 ARMC5Q96C12 935 aa12.26□□□□□ -0.45
MMP3-203ENST00000524478 CWC25Q9NXE8 425 aaPredicted RBP12.26□□□□□ -0.45
MMP3-203ENST00000524478 MINPP1Q9UNW1 487 aa12.26□□□□□ -0.45
MMP3-203ENST00000524478 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 EN2P19622 333 aaPredicted RBP12.25□□□□□ -0.45
MMP3-203ENST00000524478 CRHR2Q13324 411 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 MAP3K11Q16584 847 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 KIAA0825Q8IV33 1275 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 CERS5Q8N5B7 392 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 TTLL11Q8NHH1 800 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 CD99L2Q8TCZ2 262 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
MMP3-203ENST00000524478 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
MMP3-203ENST00000524478 IRS2Q9Y4H2 1338 aa12.25□□□□□ -0.45
MMP3-203ENST00000524478 ALDH1A1P00352 501 aa12.24□□□□□ -0.45
MMP3-203ENST00000524478 ZBTB48P10074 688 aaPredicted RBP12.24□□□□□ -0.45
MMP3-203ENST00000524478 HSP90B1P14625 803 aaKnown RBP12.24□□□□□ -0.45
MMP3-203ENST00000524478 OGFOD1Q8N543 542 aa12.24□□□□□ -0.45
MMP3-203ENST00000524478 CDC5LQ99459 802 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms