RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 HAUS7Q99871 368 aa26.03■■□□□ 1.76
R3HCC1-208ENST00000522012 GGA1Q9UJY5 639 aa26.03■■□□□ 1.76
R3HCC1-208ENST00000522012 ATP2B4P23634 1241 aa26.02■■□□□ 1.76
R3HCC1-208ENST00000522012 CAVIN4Q5BKX8 364 aa26.02■■□□□ 1.76
R3HCC1-208ENST00000522012 OLFM4Q6UX06 510 aa26.02■■□□□ 1.76
R3HCC1-208ENST00000522012 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.02■■□□□ 1.76
R3HCC1-208ENST00000522012 ZNF219Q9P2Y4 722 aaPredicted RBP26.02■■□□□ 1.76
R3HCC1-208ENST00000522012 UFL1O94874 794 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 UQCRFS1P1P0C7P4 283 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 KCNA3P22001 575 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 GYG1P46976 350 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 TTLL6Q8N841 843 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 BACH2Q9BYV9 841 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 PODXL2Q9NZ53 605 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 NDUFB9Q9Y6M9 179 aa26.01■■□□□ 1.75
R3HCC1-208ENST00000522012 CDC45O75419 566 aa26■■□□□ 1.75
R3HCC1-208ENST00000522012 KLRK1P26718 216 aa26■■□□□ 1.75
R3HCC1-208ENST00000522012 VPS37DQ86XT2 251 aa26■■□□□ 1.75
R3HCC1-208ENST00000522012 EVI5LQ96CN4 794 aa26■■□□□ 1.75
R3HCC1-208ENST00000522012 ZNF512BQ96KM6 892 aaPredicted RBP26■■□□□ 1.75
R3HCC1-208ENST00000522012 CD2APQ9Y5K6 639 aa26■■□□□ 1.75
R3HCC1-208ENST00000522012 MPNDQ8N594 471 aa25.99■■□□□ 1.75
R3HCC1-208ENST00000522012 SNRKQ9NRH2 765 aa25.99■■□□□ 1.75
R3HCC1-208ENST00000522012 C6orf229H3BNL8 230 aa25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 ARID4AP29374 1257 aaPredicted RBP25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 FKBP4Q02790 459 aaKnown RBP eCLIP25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 SCARF1Q14162 830 aa25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 TBC1D16Q8TBP0 767 aa25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 EDC3Q96F86 508 aaKnown RBP25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 FAM84BQ96KN1 310 aaPredicted RBP25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 DPP8Q6V1X1 898 aaPredicted RBP25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 GPR101Q96P66 508 aaPredicted RBP25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 GNL3LQ9NVN8 582 aaKnown RBP25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 POLLQ9UGP5 575 aa25.98■■□□□ 1.75
R3HCC1-208ENST00000522012 GOLIM4O00461 696 aa25.97■■□□□ 1.75
R3HCC1-208ENST00000522012 HIBADHP31937 336 aaKnown RBP25.97■■□□□ 1.75
R3HCC1-208ENST00000522012 MCAMP43121 646 aa25.97■■□□□ 1.75
R3HCC1-208ENST00000522012 TBC1D9Q6ZT07 1266 aa25.97■■□□□ 1.75
R3HCC1-208ENST00000522012 PAG1Q9NWQ8 432 aa25.97■■□□□ 1.75
R3HCC1-208ENST00000522012 PIM2Q9P1W9 311 aa25.97■■□□□ 1.75
R3HCC1-208ENST00000522012 DCAF8L1A6NGE4 600 aa25.96■■□□□ 1.75
R3HCC1-208ENST00000522012 CASC1Q6TDU7 716 aa25.96■■□□□ 1.75
R3HCC1-208ENST00000522012 FBXO33Q7Z6M2 555 aa25.96■■□□□ 1.75
R3HCC1-208ENST00000522012 TXNRD3Q86VQ6 643 aa25.96■■□□□ 1.75
R3HCC1-208ENST00000522012 C7orf43Q8WVR3 580 aa25.96■■□□□ 1.75
R3HCC1-208ENST00000522012 C21orf2O43822 256 aa25.95■■□□□ 1.74
R3HCC1-208ENST00000522012 ZAP70P43403 619 aa25.95■■□□□ 1.74
R3HCC1-208ENST00000522012 PI16Q6UXB8 463 aa25.95■■□□□ 1.74
R3HCC1-208ENST00000522012 IRS2Q9Y4H2 1338 aa25.95■■□□□ 1.74
R3HCC1-208ENST00000522012 C15orf52Q6ZUT6 534 aaKnown RBP25.94■■□□□ 1.74
R3HCC1-208ENST00000522012 FSD1Q9BTV5 496 aa25.94■■□□□ 1.74
R3HCC1-208ENST00000522012 HMG20BQ9P0W2 317 aa25.94■■□□□ 1.74
R3HCC1-208ENST00000522012 IQSEC3Q9UPP2 1182 aaPredicted RBP25.94■■□□□ 1.74
R3HCC1-208ENST00000522012 RASGRF1Q13972 1273 aa25.93■■□□□ 1.74
R3HCC1-208ENST00000522012 CC2D2BQ6DHV5 1058 aa25.93■■□□□ 1.74
R3HCC1-208ENST00000522012 SPATA5Q8NB90 893 aa25.93■■□□□ 1.74
R3HCC1-208ENST00000522012 WWC3Q9ULE0 1092 aa25.93■■□□□ 1.74
R3HCC1-208ENST00000522012 A0A1B0GUL6 1792 aa25.93■■□□□ 1.74
R3HCC1-208ENST00000522012 YY1P25490 414 aa25.93■■□□□ 1.74
R3HCC1-208ENST00000522012 ANTXR1Q9H6X2 564 aa25.93■■□□□ 1.74
R3HCC1-208ENST00000522012 ARAP2Q8WZ64 1704 aa25.92■■□□□ 1.74
R3HCC1-208ENST00000522012 FRAT2O75474 233 aaPredicted RBP25.92■■□□□ 1.74
R3HCC1-208ENST00000522012 CHMLP26374 656 aa25.92■■□□□ 1.74
R3HCC1-208ENST00000522012 ZNF804AQ7Z570 1209 aa25.92■■□□□ 1.74
R3HCC1-208ENST00000522012 KIF13BQ9NQT8 1826 aa25.92■■□□□ 1.74
R3HCC1-208ENST00000522012 LRRC37AA6NMS7 1700 aa25.91■■□□□ 1.74
R3HCC1-208ENST00000522012 RIMBP2O15034 1052 aa25.91■■□□□ 1.74
R3HCC1-208ENST00000522012 DALRD3Q5D0E6 543 aaKnown RBP25.91■■□□□ 1.74
R3HCC1-208ENST00000522012 KBTBD3Q8NAB2 608 aa25.9■■□□□ 1.74
R3HCC1-208ENST00000522012 ZC3H12CQ9C0D7 883 aaKnown RBP25.9■■□□□ 1.74
R3HCC1-208ENST00000522012 MED23Q9ULK4 1368 aa25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 SLX4Q8IY92 1834 aa25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 SEC24BO95487 1268 aa25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 CYP2E1P05181 493 aaPredicted RBP25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 CCDC93Q567U6 631 aa25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 EYA3Q99504 573 aa25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 DIAPH3Q9NSV4 1193 aa25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 DENND2AQ9ULE3 1009 aa25.89■■□□□ 1.74
R3HCC1-208ENST00000522012 SEMA3EO15041 775 aa25.88■■□□□ 1.73
R3HCC1-208ENST00000522012 TTF1Q15361 905 aaPredicted RBP25.88■■□□□ 1.73
R3HCC1-208ENST00000522012 WASHC4Q2M389 1173 aa25.88■■□□□ 1.73
R3HCC1-208ENST00000522012 NLGN2Q8NFZ4 835 aa25.88■■□□□ 1.73
R3HCC1-208ENST00000522012 HIP1O00291 1037 aa25.88■■□□□ 1.73
R3HCC1-208ENST00000522012 GRIPAP1Q4V328 841 aa25.88■■□□□ 1.73
R3HCC1-208ENST00000522012 RTKN2Q8IZC4 609 aa25.87■■□□□ 1.73
R3HCC1-208ENST00000522012 RTFDC1Q9BY42 306 aaPredicted RBP25.87■■□□□ 1.73
R3HCC1-208ENST00000522012 PIH1D3Q9NQM4 214 aaKnown RBP25.87■■□□□ 1.73
R3HCC1-208ENST00000522012 DLEC1Q9Y238 1755 aa25.86■■□□□ 1.73
R3HCC1-208ENST00000522012 MFAP1P55081 439 aaKnown RBP25.86■■□□□ 1.73
R3HCC1-208ENST00000522012 SOGA3Q5TF21 947 aa25.86■■□□□ 1.73
R3HCC1-208ENST00000522012 CD209Q9NNX6 404 aa25.86■■□□□ 1.73
R3HCC1-208ENST00000522012 CHAF1AQ13111 956 aaPredicted RBP25.85■■□□□ 1.73
R3HCC1-208ENST00000522012 CWC27Q6UX04 472 aaKnown RBP25.85■■□□□ 1.73
R3HCC1-208ENST00000522012 SUPT20HQ8NEM7 779 aa25.85■■□□□ 1.73
R3HCC1-208ENST00000522012 TDRD7Q8NHU6 1098 aaKnown RBP25.85■■□□□ 1.73
R3HCC1-208ENST00000522012 FHDC1Q9C0D6 1143 aaPredicted RBP25.85■■□□□ 1.73
R3HCC1-208ENST00000522012 G3V3G9 751 aa25.84■■□□□ 1.73
R3HCC1-208ENST00000522012 DCAF8Q5TAQ9 597 aa25.84■■□□□ 1.73
R3HCC1-208ENST00000522012 ESYT1Q9BSJ8 1104 aa25.84■■□□□ 1.73
R3HCC1-208ENST00000522012 TSHZ2Q9NRE2 1034 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms