RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 GREM1O60565 184 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 KATNA1O75449 491 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 TNFRSF21O75509 655 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 RGS20O76081 388 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 LIG1P18858 919 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 SOX5P35711 763 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZEB1P37275 1124 aaPredicted RBP5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 SSRP1Q08945 709 aaKnown RBP5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 FXNQ16595 210 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 RTN1Q16799 776 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 SH3PXD2AQ5TCZ1 1133 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 PRPF40BQ6NWY9 871 aaKnown RBP5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 SPATC1Q76KD6 591 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 LAPTM4BQ86VI4 370 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 NIM1KQ8IY84 436 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 LRCH3Q96II8 777 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZFRQ96KR1 1074 aaKnown RBP5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 PAGR1Q9BTK6 254 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZNF700Q9H0M5 742 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 FAM13BQ9NYF5 915 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 ANAPC4Q9UJX5 808 aa5.04□□□□□ -1.6
RNU4-60P-201ENST00000517239 EXOC5O00471 708 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 CDK2AP1O14519 115 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 TBX3O15119 743 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 AKAP10O43572 662 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 GJB6O95452 261 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 PF4P02776 101 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 MAP3K10Q02779 954 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 RAPGEF1Q13905 1077 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 SEZ6Q53EL9 994 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 SNAP47Q5SQN1 464 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 PERM1Q5SV97 790 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 WWC2Q6AWC2 1192 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 PCGF5Q86SE9 256 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 JMYQ8N9B5 988 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZNF511Q8NB15 262 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 GOLM1Q8NBJ4 401 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 NINJ1Q92982 152 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 DCBLD2Q96PD2 775 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 TNKS2Q9H2K2 1166 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZHX3Q9H4I2 956 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 AASDHPPTQ9NRN7 309 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 ZMYM5Q9UJ78 669 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 METRNQ9UJH8 293 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 TLR6Q9Y2C9 796 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 USP3Q9Y6I4 520 aa5.03□□□□□ -1.6
RNU4-60P-201ENST00000517239 A0A087X0B3 334 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 PDE8AO60658 829 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 PHACTR2O75167 634 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 DDAH1O94760 285 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 MAN1A1P33908 653 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 MCM4P33991 863 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 CRKP46108 304 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 NEK2P51955 445 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 WNT7BP56706 349 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 MLC1Q15049 377 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 MTFR1Q15390 333 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 ESCO1Q5FWF5 840 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 INTS6LQ5JSJ4 861 aaKnown RBP5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 ZNF438Q7Z4V0 828 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 PDILTQ8N807 584 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 PHC3Q8NDX5 983 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 MYRIPQ8NFW9 859 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 E2F7Q96AV8 911 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 SMAD5Q99717 465 aaKnown RBP5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 C1QTNF2Q9BXJ5 285 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 PHACTR1Q9C0D0 580 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 NBPF3Q9H094 633 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 JADE2Q9NQC1 790 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 TMPRSS4Q9NRS4 437 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 NRBP1Q9UHY1 535 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 DAAM1Q9Y4D1 1078 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 PARP3Q9Y6F1 533 aa5.02□□□□□ -1.61
RNU4-60P-201ENST00000517239 CFAP69A5D8W1 941 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GOLGA6CA6NDK9 693 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GOLGA6BA6NDN3 693 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 EML1O00423 815 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 TLR3O15455 904 aaKnown RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 FBXO24O75426 580 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 MICAL2O94851 1124 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 IFIT2P09913 472 aaKnown RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 FAM153BP0C7A2 387 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GOLGA6DP0CG33 693 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 RLBP1P12271 317 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GARTP22102 1010 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 VARSP26640 1264 aaKnown RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GIPRP48546 466 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 PABPC4Q13310 644 aaKnown RBP eCLIP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 CAMK2GQ13555 558 aaPredicted RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GRM2Q14416 872 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 CBX2Q14781 532 aaPredicted RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GRIN2CQ14957 1233 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 PPP2R5EQ16537 467 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 GRAMD1BQ3KR37 738 aa5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 INO80DQ53TQ3 878 aaPredicted RBP5.01□□□□□ -1.61
RNU4-60P-201ENST00000517239 ZNF280DQ6N043 979 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms