RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 PNMA6EA0A0J9YXQ4 647 aa22.26■■□□□ 1.15
PCDH1-207ENST00000514773 WTIPA6NIX2 430 aaPredicted RBP22.26■■□□□ 1.15
PCDH1-207ENST00000514773 YDJCA8MPS7 323 aa22.26■■□□□ 1.15
PCDH1-207ENST00000514773 G3BP1Q13283 466 aaKnown RBP eCLIP22.26■■□□□ 1.15
PCDH1-207ENST00000514773 ATG9AQ7Z3C6 839 aa22.26■■□□□ 1.15
PCDH1-207ENST00000514773 RPAP2Q8IXW5 612 aaPredicted RBP22.26■■□□□ 1.15
PCDH1-207ENST00000514773 VGLL2Q8N8G2 317 aa22.26■■□□□ 1.15
PCDH1-207ENST00000514773 SSH3Q8TE77 659 aa22.26■■□□□ 1.15
PCDH1-207ENST00000514773 PA2G4Q9UQ80 394 aaKnown RBP22.26■■□□□ 1.15
PCDH1-207ENST00000514773 HMMRO75330 724 aa22.25■■□□□ 1.15
PCDH1-207ENST00000514773 IFIT1P09914 478 aaKnown RBP22.25■■□□□ 1.15
PCDH1-207ENST00000514773 POLA2Q14181 598 aa22.25■■□□□ 1.15
PCDH1-207ENST00000514773 CAVIN4Q5BKX8 364 aa22.25■■□□□ 1.15
PCDH1-207ENST00000514773 CEP85Q6P2H3 762 aa22.25■■□□□ 1.15
PCDH1-207ENST00000514773 VPS37DQ86XT2 251 aa22.25■■□□□ 1.15
PCDH1-207ENST00000514773 RPS12P25398 132 aaKnown RBP22.24■■□□□ 1.15
PCDH1-207ENST00000514773 TXNRD3Q86VQ6 643 aa22.24■■□□□ 1.15
PCDH1-207ENST00000514773 LPIN2Q92539 896 aa22.24■■□□□ 1.15
PCDH1-207ENST00000514773 HACL1Q9UJ83 578 aa22.24■■□□□ 1.15
PCDH1-207ENST00000514773 A0A1B0GUL6 1792 aa22.24■■□□□ 1.15
PCDH1-207ENST00000514773 USP17L3A6NCW0 530 aa22.23■■□□□ 1.15
PCDH1-207ENST00000514773 USP17L4A6NCW7 530 aa22.23■■□□□ 1.15
PCDH1-207ENST00000514773 SNAP23O00161 211 aa22.23■■□□□ 1.15
PCDH1-207ENST00000514773 PSMD14O00487 310 aa22.23■■□□□ 1.15
PCDH1-207ENST00000514773 SLC5A1P13866 664 aa22.23■■□□□ 1.15
PCDH1-207ENST00000514773 USP17L1Q7RTZ2 530 aa22.23■■□□□ 1.15
PCDH1-207ENST00000514773 AKAP2Q9Y2D5 859 aa22.23■■□□□ 1.15
PCDH1-207ENST00000514773 KIF3CO14782 793 aa22.22■■□□□ 1.15
PCDH1-207ENST00000514773 KLRK1P26718 216 aa22.22■■□□□ 1.15
PCDH1-207ENST00000514773 HIBADHP31937 336 aaKnown RBP22.22■■□□□ 1.15
PCDH1-207ENST00000514773 OS9Q13438 667 aaPredicted RBP22.22■■□□□ 1.15
PCDH1-207ENST00000514773 CD209Q9NNX6 404 aa22.22■■□□□ 1.15
PCDH1-207ENST00000514773 SCN4AP35499 1836 aa22.22■■□□□ 1.15
PCDH1-207ENST00000514773 SURF6O75683 361 aaKnown RBP22.21■■□□□ 1.15
PCDH1-207ENST00000514773 VIL1P09327 827 aaKnown RBP22.21■■□□□ 1.15
PCDH1-207ENST00000514773 ATP2B3Q16720 1220 aa22.21■■□□□ 1.15
PCDH1-207ENST00000514773 HSP90AB4PQ58FF6 505 aa22.21■■□□□ 1.15
PCDH1-207ENST00000514773 STRIP1Q5VSL9 837 aa22.21■■□□□ 1.15
PCDH1-207ENST00000514773 PNMA8AQ86V59 439 aaPredicted RBP22.21■■□□□ 1.15
PCDH1-207ENST00000514773 DPF2Q92785 391 aa22.21■■□□□ 1.15
PCDH1-207ENST00000514773 IRS2Q9Y4H2 1338 aa22.21■■□□□ 1.15
PCDH1-207ENST00000514773 TOMM70O94826 608 aa22.2■■□□□ 1.14
PCDH1-207ENST00000514773 IL1R1P14778 569 aa22.2■■□□□ 1.14
PCDH1-207ENST00000514773 FGFR2P21802 821 aa22.2■■□□□ 1.14
PCDH1-207ENST00000514773 GMPSP49915 693 aaPredicted RBP22.2■■□□□ 1.14
PCDH1-207ENST00000514773 POTECB2RU33 542 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 EPHX2P34913 555 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 SCNN1DP51172 638 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 TTLL5Q6EMB2 1281 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 RSBN1LQ6PCB5 846 aaPredicted RBP22.19■■□□□ 1.14
PCDH1-207ENST00000514773 AGBL3Q8NEM8 1001 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 FBXW7Q969H0 707 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 FAM84BQ96KN1 310 aaPredicted RBP22.19■■□□□ 1.14
PCDH1-207ENST00000514773 TAF1DQ9H5J8 278 aaPredicted RBP22.19■■□□□ 1.14
PCDH1-207ENST00000514773 KCNQ5Q9NR82 932 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 GPRC5DQ9NZD1 345 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 NOP58Q9Y2X3 529 aaKnown RBP22.19■■□□□ 1.14
PCDH1-207ENST00000514773 MYO3BQ8WXR4 1341 aa22.19■■□□□ 1.14
PCDH1-207ENST00000514773 H7C1D1 291 aa22.18■■□□□ 1.14
PCDH1-207ENST00000514773 GYG1P46976 350 aa22.18■■□□□ 1.14
PCDH1-207ENST00000514773 MMP14P50281 582 aa22.18■■□□□ 1.14
PCDH1-207ENST00000514773 AAMPQ13685 434 aa22.18■■□□□ 1.14
PCDH1-207ENST00000514773 ERC1Q8IUD2 1116 aa22.18■■□□□ 1.14
PCDH1-207ENST00000514773 FRAT2O75474 233 aaPredicted RBP22.17■■□□□ 1.14
PCDH1-207ENST00000514773 SASH1O94885 1247 aa22.17■■□□□ 1.14
PCDH1-207ENST00000514773 TFCP2Q12800 502 aa22.17■■□□□ 1.14
PCDH1-207ENST00000514773 FBXO33Q7Z6M2 555 aa22.17■■□□□ 1.14
PCDH1-207ENST00000514773 RBM46Q8TBY0 533 aaKnown RBP22.17■■□□□ 1.14
PCDH1-207ENST00000514773 GNL3LQ9NVN8 582 aaKnown RBP22.17■■□□□ 1.14
PCDH1-207ENST00000514773 ZNF609O15014 1411 aa22.16■■□□□ 1.14
PCDH1-207ENST00000514773 GTF2IP78347 998 aa22.16■■□□□ 1.14
PCDH1-207ENST00000514773 USP50Q70EL3 339 aaPredicted RBP22.16■■□□□ 1.14
PCDH1-207ENST00000514773 ADARB2Q9NS39 739 aaKnown RBP22.16■■□□□ 1.14
PCDH1-207ENST00000514773 CNOT7Q9UIV1 285 aaKnown RBP22.16■■□□□ 1.14
PCDH1-207ENST00000514773 ZBTB12Q9Y330 459 aaPredicted RBP22.16■■□□□ 1.14
PCDH1-207ENST00000514773 SUPT16HQ9Y5B9 1047 aaKnown RBP22.16■■□□□ 1.14
PCDH1-207ENST00000514773 EPS15P42566 896 aa22.15■■□□□ 1.14
PCDH1-207ENST00000514773 DACT2Q5SW24 774 aa22.15■■□□□ 1.14
PCDH1-207ENST00000514773 TDRD7Q8NHU6 1098 aaKnown RBP22.15■■□□□ 1.14
PCDH1-207ENST00000514773 SCN9AQ15858 1988 aa22.15■■□□□ 1.14
PCDH1-207ENST00000514773 BCAMP50895 628 aa22.14■■□□□ 1.13
PCDH1-207ENST00000514773 EAPPQ56P03 285 aaPredicted RBP22.14■■□□□ 1.13
PCDH1-207ENST00000514773 MICALL2Q8IY33 904 aa22.14■■□□□ 1.13
PCDH1-207ENST00000514773 OGFOD1Q8N543 542 aa22.14■■□□□ 1.13
PCDH1-207ENST00000514773 SMC1BQ8NDV3 1235 aa22.14■■□□□ 1.13
PCDH1-207ENST00000514773 GPR108Q9NPR9 543 aa22.14■■□□□ 1.13
PCDH1-207ENST00000514773 PSME4Q14997 1843 aa22.14■■□□□ 1.13
PCDH1-207ENST00000514773 A0A1B0GUL7 405 aa22.13■■□□□ 1.13
PCDH1-207ENST00000514773 USP17L8P0C7I0 530 aa22.13■■□□□ 1.13
PCDH1-207ENST00000514773 FKBP1AP62942 108 aaKnown RBP22.13■■□□□ 1.13
PCDH1-207ENST00000514773 LDHDQ86WU2 507 aa22.13■■□□□ 1.13
PCDH1-207ENST00000514773 NEUROD6Q96NK8 337 aa22.13■■□□□ 1.13
PCDH1-207ENST00000514773 CRBNQ96SW2 442 aa22.13■■□□□ 1.13
PCDH1-207ENST00000514773 FAM205AQ6ZU69 1335 aa22.12■■□□□ 1.13
PCDH1-207ENST00000514773 TIMM10P62072 90 aa22.12■■□□□ 1.13
PCDH1-207ENST00000514773 FSTL1Q12841 308 aa22.12■■□□□ 1.13
PCDH1-207ENST00000514773 GORABQ5T7V8 394 aa22.12■■□□□ 1.13
PCDH1-207ENST00000514773 TBC1D22AQ8WUA7 517 aa22.12■■□□□ 1.13
PCDH1-207ENST00000514773 CLEC11AQ9Y240 323 aa22.12■■□□□ 1.13
PCDH1-207ENST00000514773 SEMA3EO15041 775 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms