RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 UBN2Q6ZU65 1347 aa12.87□□□□□ -0.35
HOXA4-203ENST00000511914 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
HOXA4-203ENST00000511914 PNMA6EA0A0J9YXQ4 647 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 PDE4AP27815 886 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
HOXA4-203ENST00000511914 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 PSMD1Q99460 953 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
HOXA4-203ENST00000511914 TAF1P21675 1872 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 SRGAP3O43295 1099 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 EPS15P42566 896 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 CASP7P55210 303 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
HOXA4-203ENST00000511914 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
HOXA4-203ENST00000511914 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
HOXA4-203ENST00000511914 HSPA8P11142 646 aaKnown RBP12.84□□□□□ -0.35
HOXA4-203ENST00000511914 SCNN1DP51172 638 aa12.84□□□□□ -0.35
HOXA4-203ENST00000511914 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
HOXA4-203ENST00000511914 SUSD4Q5VX71 490 aa12.84□□□□□ -0.35
HOXA4-203ENST00000511914 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
HOXA4-203ENST00000511914 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
HOXA4-203ENST00000511914 LRRCC1Q9C099 1032 aa12.84□□□□□ -0.35
HOXA4-203ENST00000511914 THSD7BQ9C0I4 1608 aa12.84□□□□□ -0.35
HOXA4-203ENST00000511914 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 MAP3K13O43283 966 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
HOXA4-203ENST00000511914 BMP2KLQ5H9B9 411 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 ERC1Q8IUD2 1116 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 KIF1BPQ96EK5 621 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
HOXA4-203ENST00000511914 KAZALD1Q96I82 304 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 PLA2G12BQ9BX93 195 aa12.83□□□□□ -0.36
HOXA4-203ENST00000511914 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
HOXA4-203ENST00000511914 RIC1Q4ADV7 1423 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 TRAF5O00463 557 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 PPIP5K2O43314 1243 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
HOXA4-203ENST00000511914 AOC3Q16853 763 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
HOXA4-203ENST00000511914 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 CYP4F22Q6NT55 531 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 UBE3BQ7Z3V4 1068 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 NIM1KQ8IY84 436 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 OSBPL3Q9H4L5 887 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
HOXA4-203ENST00000511914 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
HOXA4-203ENST00000511914 SURF6O75683 361 aaKnown RBP12.81□□□□□ -0.36
HOXA4-203ENST00000511914 NTSR2O95665 410 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
HOXA4-203ENST00000511914 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
HOXA4-203ENST00000511914 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
HOXA4-203ENST00000511914 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 PLEKHM2Q8IWE5 1019 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 ZNF34Q8IZ26 560 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 ZBTB38Q8NAP3 1195 aaPredicted RBP12.81□□□□□ -0.36
HOXA4-203ENST00000511914 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
HOXA4-203ENST00000511914 ABHD8Q96I13 439 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 CAPNS2Q96L46 248 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
HOXA4-203ENST00000511914 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 CST9Q5W186 159 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 NLRP10Q86W26 655 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 COPRSQ9NQ92 184 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 EXOC6BQ9Y2D4 811 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 AOX1Q06278 1338 aa12.8□□□□□ -0.36
HOXA4-203ENST00000511914 FOXO4P98177 505 aa12.79□□□□□ -0.36
HOXA4-203ENST00000511914 USP50Q70EL3 339 aaPredicted RBP12.79□□□□□ -0.36
HOXA4-203ENST00000511914 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
HOXA4-203ENST00000511914 NLRP3Q96P20 1036 aa12.79□□□□□ -0.36
HOXA4-203ENST00000511914 GPR101Q96P66 508 aaPredicted RBP12.79□□□□□ -0.36
HOXA4-203ENST00000511914 CRAMP1Q96RY5 1269 aa12.79□□□□□ -0.36
HOXA4-203ENST00000511914 BEGAINQ9BUH8 593 aa12.79□□□□□ -0.36
HOXA4-203ENST00000511914 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
HOXA4-203ENST00000511914 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
HOXA4-203ENST00000511914 AOC2O75106 756 aa12.78□□□□□ -0.36
HOXA4-203ENST00000511914 ECE1P42892 770 aa12.78□□□□□ -0.36
HOXA4-203ENST00000511914 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
HOXA4-203ENST00000511914 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
HOXA4-203ENST00000511914 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
HOXA4-203ENST00000511914 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
HOXA4-203ENST00000511914 DDX60Q8IY21 1712 aaKnown RBP12.77□□□□□ -0.36
HOXA4-203ENST00000511914 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
HOXA4-203ENST00000511914 TIE1P35590 1138 aa12.77□□□□□ -0.37
HOXA4-203ENST00000511914 RFX5P48382 616 aaPredicted RBP12.77□□□□□ -0.37
HOXA4-203ENST00000511914 PDE1AP54750 535 aa12.77□□□□□ -0.37
HOXA4-203ENST00000511914 CXCL9Q07325 125 aa12.77□□□□□ -0.37
HOXA4-203ENST00000511914 EPHA10Q5JZY3 1008 aa12.77□□□□□ -0.37
HOXA4-203ENST00000511914 UTP14AQ9BVJ6 771 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms