RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 STK3Q13188 491 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 SNW1Q13573 536 aaKnown RBP10.63□□□□□ -0.71
SNF8-210ENST00000511214 LRRFIP1Q32MZ4 808 aaKnown RBP10.63□□□□□ -0.71
SNF8-210ENST00000511214 C11orf57Q6ZUT1 292 aaPredicted RBP10.63□□□□□ -0.71
SNF8-210ENST00000511214 DHX40Q8IX18 779 aaKnown RBP10.63□□□□□ -0.71
SNF8-210ENST00000511214 KIF18AQ8NI77 898 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 ANKRD24Q8TF21 1146 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 TCEANC2Q96MN5 208 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 PRDM10Q9NQV6 1147 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 FAM53CQ9NYF3 392 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 TAF6LQ9Y6J9 622 aa10.63□□□□□ -0.71
SNF8-210ENST00000511214 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.63□□□□□ -0.71
SNF8-210ENST00000511214 ZBTB7CA1YPR0 619 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 PTPDC1A2A3K4 754 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 YEATS4O95619 227 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 GCP02774 474 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 FGD1P98174 961 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 ADALQ6DHV7 355 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 ZNF790Q6PG37 636 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 FMR1NBQ8N0W7 255 aaPredicted RBP10.62□□□□□ -0.71
SNF8-210ENST00000511214 CCAR2Q8N163 923 aaKnown RBP10.62□□□□□ -0.71
SNF8-210ENST00000511214 KCNG4Q8TDN1 519 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 MRPS27Q92552 414 aaKnown RBP10.62□□□□□ -0.71
SNF8-210ENST00000511214 LRRC59Q96AG4 307 aaKnown RBP10.62□□□□□ -0.71
SNF8-210ENST00000511214 ARID3AQ99856 593 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 SLC52A2Q9HAB3 445 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 SCN11AQ9UI33 1791 aa10.62□□□□□ -0.71
SNF8-210ENST00000511214 C5P01031 1676 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 FAM177BA6PVY3 158 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 SLU7O95391 586 aaKnown RBP10.61□□□□□ -0.71
SNF8-210ENST00000511214 CTDNEP1O95476 244 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 CEBPAP49715 358 aaPredicted RBP10.61□□□□□ -0.71
SNF8-210ENST00000511214 TFCP2Q12800 502 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 COL9A3Q14050 684 aaPredicted RBP10.61□□□□□ -0.71
SNF8-210ENST00000511214 ZMYM1Q5SVZ6 1142 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 LRP10Q7Z4F1 713 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 BRAPQ7Z569 592 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 KRT222Q8N1A0 295 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 FSIP1Q8NA03 581 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 XAGE3Q8WTP9 111 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 USP28Q96RU2 1077 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 MYD88Q99836 296 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 SIL1Q9H173 461 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 GOLPH3LQ9H4A5 285 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 L2HGDHQ9H9P8 463 aa10.61□□□□□ -0.71
SNF8-210ENST00000511214 WDR19Q8NEZ3 1342 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 DHX16O60231 1041 aaKnown RBP10.6□□□□□ -0.71
SNF8-210ENST00000511214 SNRPA1P09661 255 aaKnown RBP10.6□□□□□ -0.71
SNF8-210ENST00000511214 EPHA10Q5JZY3 1008 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 STOX1Q6ZVD7 989 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 COPS6Q7L5N1 327 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 DDX11Q96FC9 970 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 TIGD1Q96MW7 591 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 ATG3Q9NT62 314 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 POLR3EQ9NVU0 708 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 KIF1AQ12756 1690 aa10.6□□□□□ -0.71
SNF8-210ENST00000511214 PRAMEF22A3QJZ6 481 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 IKBKBO14920 756 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 CIAO1O76071 339 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 PDIA3P30101 505 aaKnown RBP10.59□□□□□ -0.71
SNF8-210ENST00000511214 IL15P40933 162 aaPredicted RBP10.59□□□□□ -0.71
SNF8-210ENST00000511214 CASP7P55210 303 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 NLRP12P59046 1061 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 AIMP1Q12904 312 aaKnown RBP10.59□□□□□ -0.71
SNF8-210ENST00000511214 ZRSR1Q15695 479 aaKnown RBP10.59□□□□□ -0.71
SNF8-210ENST00000511214 DBNDD2Q9BQY9 259 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 KIAA1468Q9P260 1216 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 CARMIL3Q8ND23 1372 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 ABCC12Q96J65 1359 aa10.59□□□□□ -0.71
SNF8-210ENST00000511214 KDM6AO15550 1401 aaPredicted RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 TRPM3Q9HCF6 1732 aaPredicted RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 LAMA4Q16363 1823 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 LAMB4A4D0S4 1761 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 E7EWF7 191 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 RNF113AO15541 343 aaKnown RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 ZFYP08048 801 aaPredicted RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 ME1P48163 572 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 FCHSD1Q86WN1 690 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 AOPEPQ8N6M6 819 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 LINC00301Q8NCQ3 95 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 PLBD2Q8NHP8 589 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 EDC3Q96F86 508 aaKnown RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 DNAJC2Q99543 621 aaKnown RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 SDF4Q9BRK5 362 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 SRRTQ9BXP5 876 aaKnown RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 ZHX1Q9UKY1 873 aaPredicted RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 ZNF215Q9UL58 517 aaPredicted RBP10.58□□□□□ -0.72
SNF8-210ENST00000511214 PCDHA7Q9UN72 937 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.72
SNF8-210ENST00000511214 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
SNF8-210ENST00000511214 AFDNP55196 1824 aaKnown RBP10.57□□□□□ -0.72
SNF8-210ENST00000511214 H7C1W4 665 aa10.57□□□□□ -0.72
SNF8-210ENST00000511214 CBFA2T2O43439 604 aa10.57□□□□□ -0.72
SNF8-210ENST00000511214 DTNBO60941 627 aa10.57□□□□□ -0.72
SNF8-210ENST00000511214 TPM1P09493 284 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms