RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 FAM13AO94988 1023 aa10.36□□□□□ -0.75
NUP54-210ENST00000510884 ALX3O95076 343 aa10.36□□□□□ -0.75
NUP54-210ENST00000510884 EPHA1P21709 976 aa10.36□□□□□ -0.75
NUP54-210ENST00000510884 CES1P23141 567 aa10.36□□□□□ -0.75
NUP54-210ENST00000510884 SF3B2Q13435 895 aaKnown RBP10.36□□□□□ -0.75
NUP54-210ENST00000510884 POP1Q99575 1024 aaKnown RBP10.36□□□□□ -0.75
NUP54-210ENST00000510884 NFKBIEO00221 500 aa10.35□□□□□ -0.75
NUP54-210ENST00000510884 C8orf34Q49A92 452 aa10.35□□□□□ -0.75
NUP54-210ENST00000510884 TXNDC11Q6PKC3 985 aa10.35□□□□□ -0.75
NUP54-210ENST00000510884 ACPPP15309 386 aa10.34□□□□□ -0.75
NUP54-210ENST00000510884 CD68P34810 354 aaPredicted RBP10.34□□□□□ -0.75
NUP54-210ENST00000510884 FKBP4Q02790 459 aaKnown RBP eCLIP10.34□□□□□ -0.75
NUP54-210ENST00000510884 PRR23CQ6ZRP0 262 aa10.34□□□□□ -0.75
NUP54-210ENST00000510884 KLHL23Q8NBE8 558 aa10.34□□□□□ -0.75
NUP54-210ENST00000510884 TTC16Q8NEE8 873 aa10.34□□□□□ -0.75
NUP54-210ENST00000510884 PMEPA1Q969W9 287 aa10.34□□□□□ -0.75
NUP54-210ENST00000510884 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
NUP54-210ENST00000510884 DZANK1Q9NVP4 752 aa10.34□□□□□ -0.75
NUP54-210ENST00000510884 FSCN2O14926 492 aa10.33□□□□□ -0.76
NUP54-210ENST00000510884 FZD6O60353 706 aa10.33□□□□□ -0.76
NUP54-210ENST00000510884 WISP1O95388 367 aa10.33□□□□□ -0.76
NUP54-210ENST00000510884 USP5P45974 858 aa10.33□□□□□ -0.76
NUP54-210ENST00000510884 FAM117BQ6P1L5 589 aa10.33□□□□□ -0.76
NUP54-210ENST00000510884 AGGF1Q8N302 714 aaeCLIP10.33□□□□□ -0.76
NUP54-210ENST00000510884 SNX29Q8TEQ0 813 aa10.33□□□□□ -0.76
NUP54-210ENST00000510884 H3BRJ5 948 aa10.32□□□□□ -0.76
NUP54-210ENST00000510884 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
NUP54-210ENST00000510884 EHHADHQ08426 723 aa10.32□□□□□ -0.76
NUP54-210ENST00000510884 WNT8BQ93098 351 aa10.32□□□□□ -0.76
NUP54-210ENST00000510884 KCNK4Q9NYG8 393 aa10.32□□□□□ -0.76
NUP54-210ENST00000510884 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
NUP54-210ENST00000510884 GJD3Q8N144 294 aa10.31□□□□□ -0.76
NUP54-210ENST00000510884 CARD10Q9BWT7 1032 aa10.31□□□□□ -0.76
NUP54-210ENST00000510884 EGFL7Q9UHF1 273 aa10.31□□□□□ -0.76
NUP54-210ENST00000510884 SCO2A0A1W2PP80 73 aa10.3□□□□□ -0.76
NUP54-210ENST00000510884 FAM177BA6PVY3 158 aa10.3□□□□□ -0.76
NUP54-210ENST00000510884 PDE2AO00408 941 aaPredicted RBP10.3□□□□□ -0.76
NUP54-210ENST00000510884 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
NUP54-210ENST00000510884 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
NUP54-210ENST00000510884 TMEM102Q8N9M5 508 aaPredicted RBP10.3□□□□□ -0.76
NUP54-210ENST00000510884 FOXD4L4Q8WXT5 416 aaPredicted RBP10.3□□□□□ -0.76
NUP54-210ENST00000510884 SOX13Q9UN79 622 aa10.3□□□□□ -0.76
NUP54-210ENST00000510884 EREGO14944 169 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 PHACTR2O75167 634 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 ABL1P00519 1130 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 GLB1P16278 677 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 CDC25BP30305 580 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 PIP4K2BP78356 416 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 AAMPQ13685 434 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 ACAD11Q709F0 780 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 HHIPQ96QV1 700 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 SEC31BQ9NQW1 1179 aa10.29□□□□□ -0.76
NUP54-210ENST00000510884 ADAM11O75078 769 aa10.28□□□□□ -0.76
NUP54-210ENST00000510884 CABP4P57796 275 aa10.28□□□□□ -0.76
NUP54-210ENST00000510884 KIAA1211Q6ZU35 1233 aa10.28□□□□□ -0.76
NUP54-210ENST00000510884 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
NUP54-210ENST00000510884 OSGEPQ9NPF4 335 aa10.28□□□□□ -0.76
NUP54-210ENST00000510884 FOXD3Q9UJU5 478 aaPredicted RBP10.28□□□□□ -0.76
NUP54-210ENST00000510884 EDN3P14138 238 aa10.27□□□□□ -0.77
NUP54-210ENST00000510884 LRP8Q14114 963 aa10.27□□□□□ -0.77
NUP54-210ENST00000510884 UBL7Q96S82 380 aaPredicted RBP10.27□□□□□ -0.77
NUP54-210ENST00000510884 CEP41Q9BYV8 373 aa10.27□□□□□ -0.77
NUP54-210ENST00000510884 ZFP64Q9NPA5 681 aa10.27□□□□□ -0.77
NUP54-210ENST00000510884 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
NUP54-210ENST00000510884 CCDC87Q9NVE4 849 aa10.27□□□□□ -0.77
NUP54-210ENST00000510884 ICMTO60725 284 aa10.26□□□□□ -0.77
NUP54-210ENST00000510884 TRPA1O75762 1119 aa10.26□□□□□ -0.77
NUP54-210ENST00000510884 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
NUP54-210ENST00000510884 SLC51AQ86UW1 340 aa10.26□□□□□ -0.77
NUP54-210ENST00000510884 NXPE3Q969Y0 559 aa10.26□□□□□ -0.77
NUP54-210ENST00000510884 KLHDC7BQ96G42 594 aa10.26□□□□□ -0.77
NUP54-210ENST00000510884 OSMRQ99650 979 aa10.26□□□□□ -0.77
NUP54-210ENST00000510884 UVSSAQ2YD98 709 aa10.25□□□□□ -0.77
NUP54-210ENST00000510884 UBASH3BQ8TF42 649 aa10.25□□□□□ -0.77
NUP54-210ENST00000510884 BHLHE41Q9C0J9 482 aaPredicted RBP10.25□□□□□ -0.77
NUP54-210ENST00000510884 RNF112Q9ULX5 631 aa10.25□□□□□ -0.77
NUP54-210ENST00000510884 DDX3YO15523 660 aaKnown RBP10.24□□□□□ -0.77
NUP54-210ENST00000510884 FSTP19883 344 aa10.24□□□□□ -0.77
NUP54-210ENST00000510884 FAM46AQ96IP4 442 aaKnown RBP10.24□□□□□ -0.77
NUP54-210ENST00000510884 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
NUP54-210ENST00000510884 ECM1Q16610 540 aa10.23□□□□□ -0.77
NUP54-210ENST00000510884 PEAR1Q5VY43 1037 aaPredicted RBP10.23□□□□□ -0.77
NUP54-210ENST00000510884 ARMC10Q8N2F6 343 aa10.23□□□□□ -0.77
NUP54-210ENST00000510884 BSNDQ8WZ55 320 aa10.23□□□□□ -0.77
NUP54-210ENST00000510884 RAXQ9Y2V3 346 aa10.23□□□□□ -0.77
NUP54-210ENST00000510884 VN1R5Q7Z5H4 357 aa10.22□□□□□ -0.77
NUP54-210ENST00000510884 H3BRB1 525 aa10.21□□□□□ -0.77
NUP54-210ENST00000510884 SERPINB4P48594 390 aa10.21□□□□□ -0.77
NUP54-210ENST00000510884 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.77
NUP54-210ENST00000510884 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.77
NUP54-210ENST00000510884 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
NUP54-210ENST00000510884 LATS2Q9NRM7 1088 aa10.21□□□□□ -0.77
NUP54-210ENST00000510884 DHX15O43143 795 aaKnown RBP10.2□□□□□ -0.78
NUP54-210ENST00000510884 C19orf57Q0VDD7 668 aa10.2□□□□□ -0.78
NUP54-210ENST00000510884 UTP4Q969X6 686 aaKnown RBP10.2□□□□□ -0.78
NUP54-210ENST00000510884 RNF208Q9H0X6 261 aa10.2□□□□□ -0.78
NUP54-210ENST00000510884 HYAL3O43820 417 aaPredicted RBP10.19□□□□□ -0.78
NUP54-210ENST00000510884 ARL4DP49703 201 aa10.19□□□□□ -0.78
NUP54-210ENST00000510884 ARHGAP4P98171 946 aa10.19□□□□□ -0.78
NUP54-210ENST00000510884 HGSNATQ68CP4 663 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms