RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
ITGB1-217ENST00000494395 NOB1Q9ULX3 412 aaKnown RBP11.11□□□□□ -0.63
ITGB1-217ENST00000494395 WDR90Q96KV7 1748 aa11.11□□□□□ -0.63
ITGB1-217ENST00000494395 KIF16BQ96L93 1317 aa11.1□□□□□ -0.63
ITGB1-217ENST00000494395 IARSP41252 1262 aaKnown RBP11.1□□□□□ -0.63
ITGB1-217ENST00000494395 KAZALD1Q96I82 304 aa11.1□□□□□ -0.63
ITGB1-217ENST00000494395 GREM2Q9H772 168 aa11.1□□□□□ -0.63
ITGB1-217ENST00000494395 BCAR3O75815 825 aa11.09□□□□□ -0.63
ITGB1-217ENST00000494395 EPHA10Q5JZY3 1008 aa11.09□□□□□ -0.63
ITGB1-217ENST00000494395 ARHGAP45Q92619 1136 aa11.09□□□□□ -0.63
ITGB1-217ENST00000494395 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
ITGB1-217ENST00000494395 GLTPD2A6NH11 291 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 FZD9O00144 591 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 NBPF7P0C2Y1 421 aaPredicted RBP11.08□□□□□ -0.64
ITGB1-217ENST00000494395 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 ZNF526Q8TF50 670 aaPredicted RBP11.08□□□□□ -0.64
ITGB1-217ENST00000494395 SUCLG2Q96I99 432 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 API5Q9BZZ5 524 aaKnown RBP11.08□□□□□ -0.64
ITGB1-217ENST00000494395 USP44Q9H0E7 712 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 VPS33BQ9H267 617 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
ITGB1-217ENST00000494395 TRIM27P14373 513 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 ITGA6P23229 1130 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 GPSM2P81274 684 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 KIAA2012Q0VF49 1180 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 RABL6Q3YEC7 729 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 RBM26Q5T8P6 1007 aaKnown RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 DPP8Q6V1X1 898 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 ANKRD18AQ8IVF6 992 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 MPNDQ8N594 471 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 CDC5LQ99459 802 aaKnown RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 NMRK2Q9NPI5 230 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 BSDC1Q9NW68 430 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 C9orf78Q9NZ63 289 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 ZNF646O15015 1829 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-217ENST00000494395 SCN4AP35499 1836 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 PSME4Q14997 1843 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 ZNF541Q9H0D2 1346 aa11.07□□□□□ -0.64
ITGB1-217ENST00000494395 POTECB2RU33 542 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
ITGB1-217ENST00000494395 MAP3K9P80192 1104 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 AOC3Q16853 763 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 INTS3Q68E01 1043 aaKnown RBP11.06□□□□□ -0.64
ITGB1-217ENST00000494395 LMBR1LQ6UX01 489 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 ANKRD44Q8N8A2 993 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 SUPT20HQ8NEM7 779 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 POLLQ9UGP5 575 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 MINPP1Q9UNW1 487 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 SCN9AQ15858 1988 aa11.06□□□□□ -0.64
ITGB1-217ENST00000494395 PPIP5K2O43314 1243 aa11.05□□□□□ -0.64
ITGB1-217ENST00000494395 ATF7IPQ6VMQ6 1270 aa11.05□□□□□ -0.64
ITGB1-217ENST00000494395 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
ITGB1-217ENST00000494395 BICC1Q9H694 974 aaKnown RBP11.05□□□□□ -0.64
ITGB1-217ENST00000494395 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
ITGB1-217ENST00000494395 ADAMTSL1Q8N6G6 1762 aa11.04□□□□□ -0.64
ITGB1-217ENST00000494395 DDNO94850 711 aaPredicted RBP11.04□□□□□ -0.64
ITGB1-217ENST00000494395 LARGE2Q8N3Y3 721 aa11.04□□□□□ -0.64
ITGB1-217ENST00000494395 TMX4Q9H1E5 349 aaPredicted RBP11.04□□□□□ -0.64
ITGB1-217ENST00000494395 NSFL1CQ9UNZ2 370 aaKnown RBP11.04□□□□□ -0.64
ITGB1-217ENST00000494395 XDHP47989 1333 aa11.04□□□□□ -0.64
ITGB1-217ENST00000494395 ANKRD18BA2A2Z9 1011 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 WTIPA6NIX2 430 aaPredicted RBP11.03□□□□□ -0.64
ITGB1-217ENST00000494395 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
ITGB1-217ENST00000494395 ZMYND10O75800 440 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 IGHMBP2P38935 993 aaKnown RBP11.03□□□□□ -0.64
ITGB1-217ENST00000494395 IFIT5Q13325 482 aaKnown RBP11.03□□□□□ -0.64
ITGB1-217ENST00000494395 JDP2Q8WYK2 163 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 GPR101Q96P66 508 aaPredicted RBP11.03□□□□□ -0.64
ITGB1-217ENST00000494395 MEIS3Q99687 375 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 IRS2Q9Y4H2 1338 aa11.03□□□□□ -0.64
ITGB1-217ENST00000494395 UFL1O94874 794 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 WASHC4Q2M389 1173 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 ZKSCAN2Q63HK3 967 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 NIM1KQ8IY84 436 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 FRAT1Q92837 279 aaPredicted RBP11.02□□□□□ -0.65
ITGB1-217ENST00000494395 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
ITGB1-217ENST00000494395 GGA1Q9UJY5 639 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 MED23Q9ULK4 1368 aa11.02□□□□□ -0.65
ITGB1-217ENST00000494395 C6orf229H3BNL8 230 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 UBTFL1P0CB47 393 aaPredicted RBP11.01□□□□□ -0.65
ITGB1-217ENST00000494395 RLBP1P12271 317 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 VEGFAP15692 232 aaPredicted RBP11.01□□□□□ -0.65
ITGB1-217ENST00000494395 ATP2B4P23634 1241 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
ITGB1-217ENST00000494395 CHRNDQ07001 517 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 CXCL9Q07325 125 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 CCDC57Q2TAC2 916 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 GPC2Q8N158 579 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 CLUAP1Q96AJ1 413 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 EYA3Q99504 573 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 MPHOSPH8Q99549 860 aa11.01□□□□□ -0.65
ITGB1-217ENST00000494395 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms