RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CHD1LQ86WJ1 897 aa14.19□□□□□ -0.14
LSM2-214ENST00000493387 NEUROD6Q96NK8 337 aa14.19□□□□□ -0.14
LSM2-214ENST00000493387 GTF3C3Q9Y5Q9 886 aa14.19□□□□□ -0.14
LSM2-214ENST00000493387 MED23Q9ULK4 1368 aa14.19□□□□□ -0.14
LSM2-214ENST00000493387 G3V3G9 751 aa14.18□□□□□ -0.14
LSM2-214ENST00000493387 TIMM10P62072 90 aa14.18□□□□□ -0.14
LSM2-214ENST00000493387 GORABQ5T7V8 394 aa14.18□□□□□ -0.14
LSM2-214ENST00000493387 DCAF8Q5TAQ9 597 aa14.18□□□□□ -0.14
LSM2-214ENST00000493387 ZNF804AQ7Z570 1209 aa14.18□□□□□ -0.14
LSM2-214ENST00000493387 VPS37DQ86XT2 251 aa14.18□□□□□ -0.14
LSM2-214ENST00000493387 EAF2Q96CJ1 260 aaPredicted RBP14.18□□□□□ -0.14
LSM2-214ENST00000493387 XAGE2Q96GT9 111 aa14.18□□□□□ -0.14
LSM2-214ENST00000493387 GNL3LQ9NVN8 582 aaKnown RBP14.18□□□□□ -0.14
LSM2-214ENST00000493387 ZNF609O15014 1411 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 NFKBIEO00221 500 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 PPIP5K2O43314 1243 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 SMARCA5O60264 1052 aaPredicted RBP14.17□□□□□ -0.14
LSM2-214ENST00000493387 HIBADHP31937 336 aaKnown RBP14.17□□□□□ -0.14
LSM2-214ENST00000493387 KIAA2012Q0VF49 1180 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 SLC51AQ86UW1 340 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 COA1Q9GZY4 146 aa14.17□□□□□ -0.14
LSM2-214ENST00000493387 SNAP23O00161 211 aa14.16□□□□□ -0.14
LSM2-214ENST00000493387 ZBTB22O15209 634 aa14.16□□□□□ -0.14
LSM2-214ENST00000493387 UQCRFS1P1P0C7P4 283 aa14.16□□□□□ -0.14
LSM2-214ENST00000493387 IARSP41252 1262 aaKnown RBP14.16□□□□□ -0.14
LSM2-214ENST00000493387 FBXO33Q7Z6M2 555 aa14.16□□□□□ -0.14
LSM2-214ENST00000493387 LARGE2Q8N3Y3 721 aa14.16□□□□□ -0.14
LSM2-214ENST00000493387 FAM84BQ96KN1 310 aaPredicted RBP14.16□□□□□ -0.14
LSM2-214ENST00000493387 LNPKQ9C0E8 428 aa14.16□□□□□ -0.14
LSM2-214ENST00000493387 CCDC8Q9H0W5 538 aaPredicted RBP14.16□□□□□ -0.14
LSM2-214ENST00000493387 ZNF277Q9NRM2 450 aaPredicted RBP14.16□□□□□ -0.14
LSM2-214ENST00000493387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
LSM2-214ENST00000493387 IRS2Q9Y4H2 1338 aa14.15□□□□□ -0.14
LSM2-214ENST00000493387 LTBP1Q14766 1721 aa14.15□□□□□ -0.14
LSM2-214ENST00000493387 FER1L6Q2WGJ9 1857 aa14.15□□□□□ -0.14
LSM2-214ENST00000493387 RIMBP2O15034 1052 aa14.15□□□□□ -0.14
LSM2-214ENST00000493387 LMNB1P20700 586 aa14.15□□□□□ -0.14
LSM2-214ENST00000493387 JDP2Q8WYK2 163 aa14.15□□□□□ -0.14
LSM2-214ENST00000493387 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
LSM2-214ENST00000493387 DBNDD2Q9BQY9 259 aa14.15□□□□□ -0.14
LSM2-214ENST00000493387 DBNLQ9UJU6 430 aaKnown RBP14.15□□□□□ -0.14
LSM2-214ENST00000493387 DUOX1Q9NRD9 1551 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 WTIPA6NIX2 430 aaPredicted RBP14.14□□□□□ -0.15
LSM2-214ENST00000493387 SEMA3EO15041 775 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 ADORA1P30542 326 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 GYG1P46976 350 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 AOC3Q16853 763 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 TTC39AQ5SRH9 613 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 PODNQ7Z5L7 613 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 NIM1KQ8IY84 436 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 GPR101Q96P66 508 aaPredicted RBP14.14□□□□□ -0.15
LSM2-214ENST00000493387 BCL11AQ9H165 835 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 A0A1B0GUL6 1792 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 TTC41PQ6P2S7 1318 aa14.14□□□□□ -0.15
LSM2-214ENST00000493387 ERC2O15083 957 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 IL1R1P14778 569 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 KLRK1P26718 216 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 BCAMP50895 628 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 RASSF7Q02833 373 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 TXNRD3Q86VQ6 643 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.13□□□□□ -0.15
LSM2-214ENST00000493387 CD209Q9NNX6 404 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 ECHDC1Q9NTX5 307 aa14.13□□□□□ -0.15
LSM2-214ENST00000493387 FRAT2O75474 233 aaPredicted RBP14.12□□□□□ -0.15
LSM2-214ENST00000493387 MX1P20591 662 aa14.12□□□□□ -0.15
LSM2-214ENST00000493387 PHKA1P46020 1223 aa14.12□□□□□ -0.15
LSM2-214ENST00000493387 C16orf71Q8IYS4 520 aaPredicted RBP14.12□□□□□ -0.15
LSM2-214ENST00000493387 TDRD7Q8NHU6 1098 aaKnown RBP14.12□□□□□ -0.15
LSM2-214ENST00000493387 STAP2Q9UGK3 403 aa14.12□□□□□ -0.15
LSM2-214ENST00000493387 DENND2AQ9ULE3 1009 aa14.12□□□□□ -0.15
LSM2-214ENST00000493387 ZNRF3Q9ULT6 936 aa14.12□□□□□ -0.15
LSM2-214ENST00000493387 AOX1Q06278 1338 aa14.12□□□□□ -0.15
LSM2-214ENST00000493387 ECE2O60344 883 aa14.11□□□□□ -0.15
LSM2-214ENST00000493387 GLRX3O76003 335 aaKnown RBP14.11□□□□□ -0.15
LSM2-214ENST00000493387 ATP5JP18859 108 aa14.11□□□□□ -0.15
LSM2-214ENST00000493387 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
LSM2-214ENST00000493387 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
LSM2-214ENST00000493387 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
LSM2-214ENST00000493387 TLR7Q9NYK1 1049 aaKnown RBP14.11□□□□□ -0.15
LSM2-214ENST00000493387 PDS5AQ29RF7 1337 aaKnown RBP14.11□□□□□ -0.15
LSM2-214ENST00000493387 PDE1AP54750 535 aa14.1□□□□□ -0.15
LSM2-214ENST00000493387 EIF6P56537 245 aaKnown RBP14.1□□□□□ -0.15
LSM2-214ENST00000493387 PLEKHM2Q8IWE5 1019 aa14.1□□□□□ -0.15
LSM2-214ENST00000493387 OSBPL3Q9H4L5 887 aa14.1□□□□□ -0.15
LSM2-214ENST00000493387 DBNDD1Q9H9R9 158 aa14.1□□□□□ -0.15
LSM2-214ENST00000493387 RNF181Q9P0P0 153 aa14.1□□□□□ -0.15
LSM2-214ENST00000493387 SALL3Q9BXA9 1300 aa14.1□□□□□ -0.15
LSM2-214ENST00000493387 ZC3H4Q9UPT8 1303 aaKnown RBP14.1□□□□□ -0.15
LSM2-214ENST00000493387 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
LSM2-214ENST00000493387 TNIP1Q15025 636 aa14.09□□□□□ -0.15
LSM2-214ENST00000493387 C9orf131Q5VYM1 1079 aa14.09□□□□□ -0.15
LSM2-214ENST00000493387 ZGPATQ8N5A5 531 aaKnown RBP14.09□□□□□ -0.15
LSM2-214ENST00000493387 WDR66Q8TBY9 1149 aa14.09□□□□□ -0.15
LSM2-214ENST00000493387 OTUD7AQ8TE49 926 aaPredicted RBP14.09□□□□□ -0.15
LSM2-214ENST00000493387 TBC1D22AQ8WUA7 517 aa14.09□□□□□ -0.15
LSM2-214ENST00000493387 FAM205AQ6ZU69 1335 aa14.09□□□□□ -0.15
LSM2-214ENST00000493387 USP17L3A6NCW0 530 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms