RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ZC3H12CQ9C0D7 883 aaKnown RBP10.69□□□□□ -0.7
USP39-216ENST00000490193 ASTN2O75129 1339 aaPredicted RBP10.68□□□□□ -0.7
USP39-216ENST00000490193 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
USP39-216ENST00000490193 SOX10P56693 466 aa10.68□□□□□ -0.7
USP39-216ENST00000490193 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
USP39-216ENST00000490193 RASAL3Q86YV0 1011 aa10.68□□□□□ -0.7
USP39-216ENST00000490193 GMLQ99445 158 aa10.68□□□□□ -0.7
USP39-216ENST00000490193 HYPKQ9NX55 129 aa10.68□□□□□ -0.7
USP39-216ENST00000490193 ATP5J2-PTCD1G3V325 749 aa10.67□□□□□ -0.7
USP39-216ENST00000490193 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
USP39-216ENST00000490193 RSBN1LQ6PCB5 846 aaPredicted RBP10.67□□□□□ -0.7
USP39-216ENST00000490193 ZBTB38Q8NAP3 1195 aaPredicted RBP10.67□□□□□ -0.7
USP39-216ENST00000490193 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
USP39-216ENST00000490193 LAMB1P07942 1786 aa10.67□□□□□ -0.7
USP39-216ENST00000490193 MYH3P11055 1940 aa10.66□□□□□ -0.7
USP39-216ENST00000490193 UFL1O94874 794 aa10.66□□□□□ -0.7
USP39-216ENST00000490193 SCARF1Q14162 830 aa10.66□□□□□ -0.7
USP39-216ENST00000490193 RALBP1Q15311 655 aa10.66□□□□□ -0.7
USP39-216ENST00000490193 PKN2Q16513 984 aaKnown RBP10.66□□□□□ -0.7
USP39-216ENST00000490193 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
USP39-216ENST00000490193 ANGEL2Q5VTE6 544 aaKnown RBP10.66□□□□□ -0.7
USP39-216ENST00000490193 ZNF428Q96B54 188 aa10.66□□□□□ -0.7
USP39-216ENST00000490193 GGA1Q9UJY5 639 aa10.66□□□□□ -0.7
USP39-216ENST00000490193 MAP3K13O43283 966 aa10.65□□□□□ -0.7
USP39-216ENST00000490193 RTL5Q5HYW3 569 aaPredicted RBP10.65□□□□□ -0.7
USP39-216ENST00000490193 PODNQ7Z5L7 613 aa10.65□□□□□ -0.7
USP39-216ENST00000490193 RUNDC1Q96C34 613 aa10.65□□□□□ -0.7
USP39-216ENST00000490193 MYOZ2Q9NPC6 264 aa10.65□□□□□ -0.7
USP39-216ENST00000490193 SEC31BQ9NQW1 1179 aa10.65□□□□□ -0.7
USP39-216ENST00000490193 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
USP39-216ENST00000490193 HPS5Q9UPZ3 1129 aa10.65□□□□□ -0.7
USP39-216ENST00000490193 XDHP47989 1333 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 SPEF2Q9C093 1822 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 G3V3G9 751 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 PDE8AO60658 829 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 PCCAP05165 728 aaPredicted RBP10.64□□□□□ -0.71
USP39-216ENST00000490193 USP17L8P0C7I0 530 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 CCDC152Q4G0S7 254 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 DUSP27Q5VZP5 1158 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 CCDC191Q8NCU4 936 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 CFHR5Q9BXR6 569 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 MED23Q9ULK4 1368 aa10.64□□□□□ -0.71
USP39-216ENST00000490193 USP17L3A6NCW0 530 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 USP17L4A6NCW7 530 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 ZNF853P0CG23 659 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 ATP2B4P23634 1241 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 TM4SF4P48230 202 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 MMP14P50281 582 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 USP17L1Q7RTZ2 530 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 RIC3Q7Z5B4 369 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 TRPC6Q9Y210 931 aa10.63□□□□□ -0.71
USP39-216ENST00000490193 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
USP39-216ENST00000490193 HTTP42858 3142 aa10.62□□□□□ -0.71
USP39-216ENST00000490193 IER5LQ5T953 404 aa10.62□□□□□ -0.71
USP39-216ENST00000490193 ANKRD18AQ8IVF6 992 aa10.62□□□□□ -0.71
USP39-216ENST00000490193 CCDC146Q8IYE0 955 aa10.62□□□□□ -0.71
USP39-216ENST00000490193 ZNF296Q8WUU4 475 aaPredicted RBP10.62□□□□□ -0.71
USP39-216ENST00000490193 MBIPQ9NS73 344 aa10.62□□□□□ -0.71
USP39-216ENST00000490193 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
USP39-216ENST00000490193 MYO3BQ8WXR4 1341 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
USP39-216ENST00000490193 ECM29Q5VYK3 1845 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 UBE2Q2LH0YL09 131 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 GPR25O00155 361 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 NBPF9Q3BBW0 867 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 DACT2Q5SW24 774 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 FBXO46Q6PJ61 603 aaPredicted RBP10.61□□□□□ -0.71
USP39-216ENST00000490193 MOB2Q70IA6 237 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 MYD88Q99836 296 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 PHAXQ9H814 394 aaKnown RBP10.61□□□□□ -0.71
USP39-216ENST00000490193 CWC25Q9NXE8 425 aaPredicted RBP10.61□□□□□ -0.71
USP39-216ENST00000490193 HDAC9Q9UKV0 1011 aa10.61□□□□□ -0.71
USP39-216ENST00000490193 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
USP39-216ENST00000490193 WNT10BO00744 389 aa10.6□□□□□ -0.71
USP39-216ENST00000490193 TBC1D8O95759 1140 aa10.6□□□□□ -0.71
USP39-216ENST00000490193 SREBF2Q12772 1141 aa10.6□□□□□ -0.71
USP39-216ENST00000490193 CDC5LQ99459 802 aaKnown RBP10.6□□□□□ -0.71
USP39-216ENST00000490193 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
USP39-216ENST00000490193 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
USP39-216ENST00000490193 COL1A1P02452 1464 aaPredicted RBP10.6□□□□□ -0.71
USP39-216ENST00000490193 SEC24BO95487 1268 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 NF2P35240 595 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 CTSWP56202 376 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 WDR43Q15061 677 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP39-216ENST00000490193 STRIP1Q5VSL9 837 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 COA1Q9GZY4 146 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 BSDC1Q9NW68 430 aaPredicted RBP10.59□□□□□ -0.71
USP39-216ENST00000490193 IFT57Q9NWB7 429 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 MINPP1Q9UNW1 487 aa10.59□□□□□ -0.71
USP39-216ENST00000490193 MKI67P46013 3256 aaKnown RBP10.58□□□□□ -0.72
USP39-216ENST00000490193 A0A1B0GUL6 1792 aa10.58□□□□□ -0.72
USP39-216ENST00000490193 WTIPA6NIX2 430 aaPredicted RBP10.58□□□□□ -0.72
USP39-216ENST00000490193 FKTNO75072 461 aa10.58□□□□□ -0.72
USP39-216ENST00000490193 DDX58O95786 925 aaKnown RBP10.58□□□□□ -0.72
USP39-216ENST00000490193 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
USP39-216ENST00000490193 GNAI1P63096 354 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms