RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 GMPSP49915 693 aaPredicted RBP18.74■□□□□ 0.59
CXCL12-207ENST00000488591 ZNF804AQ7Z570 1209 aa18.74■□□□□ 0.59
CXCL12-207ENST00000488591 TXNRD3Q86VQ6 643 aa18.74■□□□□ 0.59
CXCL12-207ENST00000488591 SMC1BQ8NDV3 1235 aa18.74■□□□□ 0.59
CXCL12-207ENST00000488591 KCNQ5Q9NR82 932 aa18.74■□□□□ 0.59
CXCL12-207ENST00000488591 GPRC5DQ9NZD1 345 aa18.74■□□□□ 0.59
CXCL12-207ENST00000488591 USP17L3A6NCW0 530 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 USP17L4A6NCW7 530 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 SNAP23O00161 211 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 PDE8BO95263 885 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 RPS12P25398 132 aaKnown RBP18.73■□□□□ 0.59
CXCL12-207ENST00000488591 SCNN1DP51172 638 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 FSTL1Q12841 308 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 PDE3AQ14432 1141 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
CXCL12-207ENST00000488591 EAPPQ56P03 285 aaPredicted RBP18.73■□□□□ 0.59
CXCL12-207ENST00000488591 USP17L1Q7RTZ2 530 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 DPF2Q92785 391 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 SIL1Q9H173 461 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 COPRSQ9NQ92 184 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 DDX19BQ9UMR2 479 aa18.73■□□□□ 0.59
CXCL12-207ENST00000488591 H7C1D1 291 aa18.72■□□□□ 0.59
CXCL12-207ENST00000488591 VIL1P09327 827 aaKnown RBP18.72■□□□□ 0.59
CXCL12-207ENST00000488591 KLRK1P26718 216 aa18.72■□□□□ 0.59
CXCL12-207ENST00000488591 EPS15P42566 896 aa18.72■□□□□ 0.59
CXCL12-207ENST00000488591 CD209Q9NNX6 404 aa18.72■□□□□ 0.59
CXCL12-207ENST00000488591 CEP126Q9P2H0 1117 aa18.72■□□□□ 0.59
CXCL12-207ENST00000488591 CLEC11AQ9Y240 323 aa18.72■□□□□ 0.59
CXCL12-207ENST00000488591 IL15P40933 162 aaPredicted RBP18.71■□□□□ 0.59
CXCL12-207ENST00000488591 LDHDQ86WU2 507 aa18.71■□□□□ 0.59
CXCL12-207ENST00000488591 FBXW7Q969H0 707 aa18.71■□□□□ 0.59
CXCL12-207ENST00000488591 ADARB2Q9NS39 739 aaKnown RBP18.71■□□□□ 0.59
CXCL12-207ENST00000488591 CNOT7Q9UIV1 285 aaKnown RBP18.71■□□□□ 0.59
CXCL12-207ENST00000488591 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
CXCL12-207ENST00000488591 ZBTB12Q9Y330 459 aaPredicted RBP18.71■□□□□ 0.59
CXCL12-207ENST00000488591 IFIT1P09914 478 aaKnown RBP18.7■□□□□ 0.58
CXCL12-207ENST00000488591 ATP8B2P98198 1209 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 PUM3Q15397 648 aaKnown RBP18.7■□□□□ 0.58
CXCL12-207ENST00000488591 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 STRIP1Q5VSL9 837 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 CHADLQ6NUI6 762 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 RSBN1LQ6PCB5 846 aaPredicted RBP18.7■□□□□ 0.58
CXCL12-207ENST00000488591 USP50Q70EL3 339 aaPredicted RBP18.7■□□□□ 0.58
CXCL12-207ENST00000488591 ATG9AQ7Z3C6 839 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 VPS37DQ86XT2 251 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 AGBL3Q8NEM8 1001 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 PA2G4Q9UQ80 394 aaKnown RBP18.7■□□□□ 0.58
CXCL12-207ENST00000488591 IRS2Q9Y4H2 1338 aa18.7■□□□□ 0.58
CXCL12-207ENST00000488591 HIBADHP31937 336 aaKnown RBP18.69■□□□□ 0.58
CXCL12-207ENST00000488591 TTLL5Q6EMB2 1281 aa18.69■□□□□ 0.58
CXCL12-207ENST00000488591 MICALL2Q8IY33 904 aa18.69■□□□□ 0.58
CXCL12-207ENST00000488591 C1orf115Q9H7X2 142 aa18.69■□□□□ 0.58
CXCL12-207ENST00000488591 SCN9AQ15858 1988 aa18.69■□□□□ 0.58
CXCL12-207ENST00000488591 PNMA6EA0A0J9YXQ4 647 aa18.68■□□□□ 0.58
CXCL12-207ENST00000488591 SLC5A1P13866 664 aa18.68■□□□□ 0.58
CXCL12-207ENST00000488591 IL1R1P14778 569 aa18.68■□□□□ 0.58
CXCL12-207ENST00000488591 G3BP1Q13283 466 aaKnown RBP eCLIP18.68■□□□□ 0.58
CXCL12-207ENST00000488591 LPIN2Q92539 896 aa18.68■□□□□ 0.58
CXCL12-207ENST00000488591 MYO3BQ8WXR4 1341 aa18.68■□□□□ 0.58
CXCL12-207ENST00000488591 PSME4Q14997 1843 aa18.67■□□□□ 0.58
CXCL12-207ENST00000488591 GYG1P46976 350 aa18.67■□□□□ 0.58
CXCL12-207ENST00000488591 GTF2IP78347 998 aa18.67■□□□□ 0.58
CXCL12-207ENST00000488591 FAM84BQ96KN1 310 aaPredicted RBP18.67■□□□□ 0.58
CXCL12-207ENST00000488591 POTEIP0CG38 1075 aa18.66■□□□□ 0.58
CXCL12-207ENST00000488591 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
CXCL12-207ENST00000488591 POLA2Q14181 598 aa18.66■□□□□ 0.58
CXCL12-207ENST00000488591 DACT2Q5SW24 774 aa18.66■□□□□ 0.58
CXCL12-207ENST00000488591 SSH3Q8TE77 659 aa18.66■□□□□ 0.58
CXCL12-207ENST00000488591 FRAT2O75474 233 aaPredicted RBP18.65■□□□□ 0.58
CXCL12-207ENST00000488591 SASH1O94885 1247 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 USP17L8P0C7I0 530 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 FGFR2P21802 821 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 MMP14P50281 582 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 ATP2B3Q16720 1220 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 C20orf194Q5TEA3 1177 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 FBXO33Q7Z6M2 555 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 OGFOD1Q8N543 542 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 ZNF609O15014 1411 aa18.65■□□□□ 0.58
CXCL12-207ENST00000488591 HSPA6P17066 643 aa18.64■□□□□ 0.57
CXCL12-207ENST00000488591 OS9Q13438 667 aaPredicted RBP18.64■□□□□ 0.57
CXCL12-207ENST00000488591 CEP85Q6P2H3 762 aa18.64■□□□□ 0.57
CXCL12-207ENST00000488591 TDRD7Q8NHU6 1098 aaKnown RBP18.64■□□□□ 0.57
CXCL12-207ENST00000488591 GMLQ99445 158 aa18.64■□□□□ 0.57
CXCL12-207ENST00000488591 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.57
CXCL12-207ENST00000488591 SHTN1A0MZ66 631 aa18.63■□□□□ 0.57
CXCL12-207ENST00000488591 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
CXCL12-207ENST00000488591 RRP1P56182 461 aaKnown RBP18.63■□□□□ 0.57
CXCL12-207ENST00000488591 TFCP2Q12800 502 aa18.63■□□□□ 0.57
CXCL12-207ENST00000488591 RBM26Q5T8P6 1007 aaKnown RBP18.63■□□□□ 0.57
CXCL12-207ENST00000488591 SAMD7Q7Z3H4 446 aa18.63■□□□□ 0.57
CXCL12-207ENST00000488591 RPAP2Q8IXW5 612 aaPredicted RBP18.63■□□□□ 0.57
CXCL12-207ENST00000488591 ZC3H15Q8WU90 426 aaKnown RBP18.63■□□□□ 0.57
CXCL12-207ENST00000488591 HDAC9Q9UKV0 1011 aa18.63■□□□□ 0.57
CXCL12-207ENST00000488591 HMMRO75330 724 aa18.62■□□□□ 0.57
CXCL12-207ENST00000488591 BCAMP50895 628 aa18.62■□□□□ 0.57
CXCL12-207ENST00000488591 ZNF280AP59817 542 aaPredicted RBP18.62■□□□□ 0.57
CXCL12-207ENST00000488591 FKBP1AP62942 108 aaKnown RBP18.62■□□□□ 0.57
CXCL12-207ENST00000488591 TBC1D10BQ4KMP7 808 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms