RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 CD109Q6YHK3 1445 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ZNF202O95125 648 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ST7Q9NRC1 585 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 FEZ2Q9UHY8 353 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 USP27XA6NNY8 438 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 FAM71BQ8TC56 605 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 NAPGQ99747 312 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 ADAM21Q9UKJ8 722 aa17.46■□□□□ 0.39
HLA-DQB1-209ENST00000487676 USO1O60763 962 aaKnown RBP17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 EZRP15311 586 aaKnown RBP17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ADCK5Q3MIX3 580 aa17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 FAM227BQ96M60 508 aa17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MED4Q9NPJ6 270 aa17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 JADE2Q9NQC1 790 aa17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MAGEA9P43362 315 aa17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ADALQ6DHV7 355 aa17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 BANK1Q8NDB2 785 aa17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ALDH1L1O75891 902 aa17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 LARGE1O95461 756 aa17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 RBM33Q96EV2 1170 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ZRANB1Q9UGI0 708 aa17.45■□□□□ 0.38
HLA-DQB1-209ENST00000487676 A0A0G2JS52 829 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 KLF18A0A0U1RQI7 1052 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 A6NNZ2 444 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 TUBB8Q3ZCM7 444 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 EFCAB13Q8IY85 973 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 LRRIQ1Q96JM4 1722 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CNGA4Q8IV77 575 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 GBP2P32456 591 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 TTF2Q9UNY4 1162 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MTHFSDQ2M296 383 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-209ENST00000487676 PARD6BQ9BYG5 372 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 PSME1Q06323 249 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 SPAG1Q07617 926 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MTX1Q13505 466 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CEP57Q86XR8 500 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 GOLGA6CA6NDK9 693 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 GOLGA6DP0CG33 693 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 GOLGA6AQ9NYA3 693 aa17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 IFIT1P09914 478 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ATRIPQ8WXE1 791 aa17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CEP89Q96ST8 783 aa17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CEP126Q9P2H0 1117 aa17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 A0A087WUV0 522 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 NDUFAB1O14561 156 aa17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ABTB2Q8N961 1025 aa17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ALG1Q9BT22 464 aa17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ZNF213O14771 459 aa17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CC2D1AQ6P1N0 951 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-209ENST00000487676 GOLIM4O00461 696 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 SPECC1LQ69YQ0 1117 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 TTC14Q96N46 770 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 OSBPL5Q9H0X9 879 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ZCCHC17Q9NP64 241 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 GUCA1BQ9UMX6 200 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 TRPM2O94759 1503 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 NAA15Q9BXJ9 866 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 USP44Q9H0E7 712 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MYOM2P54296 1465 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 IQSEC2Q5JU85 1478 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 FOXO3O43524 673 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MYL6BP14649 208 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MUM1L1Q5H9M0 696 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 RCOR1Q9UKL0 485 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ABCC1P33527 1531 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MED14O60244 1454 aa17.41■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ANXA1P04083 346 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 NCOA7Q8NI08 942 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 NPATQ14207 1427 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 A0A1B0GUA9 196 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ZEB2O60315 1214 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MARCH6O60337 910 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 STX10O60499 249 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CYLC1P35663 651 aaPredicted RBP17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 RAB11FIP4Q86YS3 637 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 FAN1Q9Y2M0 1017 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 MATR3P43243 847 aaKnown RBP eCLIP17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 SLC20A2Q08357 652 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 CCDC121Q6ZUS5 278 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 KRT86O43790 486 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 ALS2CR12Q96Q35 445 aa17.4■□□□□ 0.38
HLA-DQB1-209ENST00000487676 LIG3P49916 1009 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 PLCD4Q9BRC7 762 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 AK9Q5TCS8 1911 aa17.39■□□□□ 0.37
HLA-DQB1-209ENST00000487676 TTC21AQ8NDW8 1320 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms