RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZBTB1Q9Y2K1 713 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 ZNF165P49910 485 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 COPRSQ9NQ92 184 aa15.43■□□□□ 0.06
HMGN1-216ENST00000486741 PCMTD1Q96MG8 357 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-216ENST00000486741 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 FAM182BQ5T319 152 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 GPAA1O43292 621 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 TOM1O60784 492 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 RFC4P35249 363 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 IKQ13123 557 aaPredicted RBP15.42■□□□□ 0.06
HMGN1-216ENST00000486741 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 SPATA31D1Q6ZQQ2 1576 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 PDIA4P13667 645 aaKnown RBP15.42■□□□□ 0.06
HMGN1-216ENST00000486741 MKNK2Q9HBH9 465 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 ADCY9O60503 1353 aa15.42■□□□□ 0.06
HMGN1-216ENST00000486741 B4E1Z4 1266 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 TPM3P06753 285 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 MBD4O95243 580 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 CARD10Q9BWT7 1032 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 GREM2Q9H772 168 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 RRAGDQ9NQL2 400 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-216ENST00000486741 C6orf229H3BNL8 230 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 ZBTB43O43298 467 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 LARGE1O95461 756 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 RBM5P52756 815 aaKnown RBP eCLIP15.41■□□□□ 0.06
HMGN1-216ENST00000486741 ALG1Q9BT22 464 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 TECPR2O15040 1411 aa15.41■□□□□ 0.06
HMGN1-216ENST00000486741 PIGBQ92521 554 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 TTC12Q9H892 705 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-216ENST00000486741 SSRP1Q08945 709 aaKnown RBP15.4■□□□□ 0.06
HMGN1-216ENST00000486741 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 MYL10Q9BUA6 226 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 DDX19AQ9NUU7 478 aaKnown RBP15.4■□□□□ 0.06
HMGN1-216ENST00000486741 NEURL4Q96JN8 1562 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 GPT2Q8TD30 523 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 AK7Q96M32 723 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 ARMT1Q9H993 441 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 MYO5BQ9ULV0 1848 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 ANO6Q4KMQ2 910 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 FAM177A1Q8N128 213 aaPredicted RBP15.4■□□□□ 0.06
HMGN1-216ENST00000486741 DNAJC25Q9H1X3 360 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 HELLSQ9NRZ9 838 aa15.4■□□□□ 0.06
HMGN1-216ENST00000486741 CEP170BQ9Y4F5 1589 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-216ENST00000486741 SIGLEC1Q9BZZ2 1709 aa15.39■□□□□ 0.05
HMGN1-216ENST00000486741 PDE8AO60658 829 aa15.39■□□□□ 0.05
HMGN1-216ENST00000486741 CHGBP05060 677 aa15.39■□□□□ 0.05
HMGN1-216ENST00000486741 HSP90AA4PQ58FG1 418 aa15.39■□□□□ 0.05
HMGN1-216ENST00000486741 GNPATO15228 680 aa15.39■□□□□ 0.05
HMGN1-216ENST00000486741 KLHL10Q6JEL2 608 aa15.39■□□□□ 0.05
HMGN1-216ENST00000486741 ZSCAN16Q9H4T2 348 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-216ENST00000486741 SNAP23O00161 211 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 MAP4K1Q92918 833 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 IL25Q9H293 177 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 PRDM1O75626 825 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 WTAPQ15007 396 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-216ENST00000486741 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
HMGN1-216ENST00000486741 ZSWIM6Q9HCJ5 1215 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 RICTORQ6R327 1708 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-216ENST00000486741 ATP10DQ9P241 1426 aa15.38■□□□□ 0.05
HMGN1-216ENST00000486741 APPBP2Q92624 585 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 HAUS7Q99871 368 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 CCDC87Q9NVE4 849 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 DIP2AQ14689 1571 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 TSPY2A6NKD2 308 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 TPM1P09493 284 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 NAA16Q6N069 864 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-216ENST00000486741 CTCFLQ8NI51 663 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-216ENST00000486741 RNF41Q9H4P4 317 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-216ENST00000486741 E7EWF7 191 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
HMGN1-216ENST00000486741 CYP21A2P08686 494 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 HSPD1P10809 573 aaKnown RBP15.37■□□□□ 0.05
HMGN1-216ENST00000486741 TSR1Q2NL82 804 aaKnown RBP15.37■□□□□ 0.05
HMGN1-216ENST00000486741 WASF1Q92558 559 aa15.37■□□□□ 0.05
HMGN1-216ENST00000486741 ERCC4Q92889 916 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-216ENST00000486741 NBPF26B4DH59 902 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 NBPF14Q5TI25 921 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 NBPF10Q6P3W6 841 aaKnown RBP15.36■□□□□ 0.05
HMGN1-216ENST00000486741 LUZP1Q86V48 1076 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 NBPF15Q8N660 670 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 SMARCC1Q92922 1105 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-216ENST00000486741 ANO10Q9NW15 660 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 UQCRHLA0A096LP55 91 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 CCDC196A0A1B0GTZ2 297 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 UQCRHP07919 91 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 ZBTB38Q8NAP3 1195 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-216ENST00000486741 VAT1LQ9HCJ6 419 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 STX8Q9UNK0 236 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 NRKQ7Z2Y5 1582 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 F8W031 263 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-216ENST00000486741 DHX8Q14562 1220 aaKnown RBP15.36■□□□□ 0.05
HMGN1-216ENST00000486741 HLFQ16534 295 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 CFAP100Q494V2 611 aa15.36■□□□□ 0.05
HMGN1-216ENST00000486741 TM6SF1Q9BZW5 370 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms