RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ZNF211Q13398 564 aaPredicted RBP11.68□□□□□ -0.54
UBR3-210ENST00000484596 AAMPQ13685 434 aa11.68□□□□□ -0.54
UBR3-210ENST00000484596 ADAMTSL4Q6UY14 1074 aa11.68□□□□□ -0.54
UBR3-210ENST00000484596 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
UBR3-210ENST00000484596 TTC16Q8NEE8 873 aa11.68□□□□□ -0.54
UBR3-210ENST00000484596 TUT1Q9H6E5 874 aaKnown RBP11.68□□□□□ -0.54
UBR3-210ENST00000484596 PPME1Q9Y570 386 aa11.68□□□□□ -0.54
UBR3-210ENST00000484596 NOS3P29474 1203 aa11.67□□□□□ -0.54
UBR3-210ENST00000484596 SSBP4Q9BWG4 385 aaPredicted RBP11.67□□□□□ -0.54
UBR3-210ENST00000484596 PBX4Q9BYU1 374 aa11.67□□□□□ -0.54
UBR3-210ENST00000484596 MUC3BQ9H195 1237 aa11.67□□□□□ -0.54
UBR3-210ENST00000484596 ANO2Q9NQ90 1003 aa11.67□□□□□ -0.54
UBR3-210ENST00000484596 CES1P23141 567 aa11.66□□□□□ -0.54
UBR3-210ENST00000484596 MAP4K3Q8IVH8 894 aa11.66□□□□□ -0.54
UBR3-210ENST00000484596 TP53INP1Q96A56 240 aa11.66□□□□□ -0.54
UBR3-210ENST00000484596 SRA1Q9HD15 236 aaKnown RBP11.66□□□□□ -0.54
UBR3-210ENST00000484596 BIN2Q9UBW5 565 aaPredicted RBP11.66□□□□□ -0.54
UBR3-210ENST00000484596 SALL4Q9UJQ4 1053 aa11.66□□□□□ -0.54
UBR3-210ENST00000484596 LINC01387J3KSC0 135 aa11.65□□□□□ -0.54
UBR3-210ENST00000484596 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
UBR3-210ENST00000484596 CDC27P30260 824 aa11.64□□□□□ -0.55
UBR3-210ENST00000484596 TXNDC11Q6PKC3 985 aa11.64□□□□□ -0.55
UBR3-210ENST00000484596 POP1Q99575 1024 aaKnown RBP11.64□□□□□ -0.55
UBR3-210ENST00000484596 CHRDQ9H2X0 955 aa11.64□□□□□ -0.55
UBR3-210ENST00000484596 FZD6O60353 706 aa11.63□□□□□ -0.55
UBR3-210ENST00000484596 H2AFB1P0C5Y9 115 aa11.63□□□□□ -0.55
UBR3-210ENST00000484596 H2AFB2P0C5Z0 115 aa11.63□□□□□ -0.55
UBR3-210ENST00000484596 ACPPP15309 386 aa11.63□□□□□ -0.55
UBR3-210ENST00000484596 CDC25BP30305 580 aa11.63□□□□□ -0.55
UBR3-210ENST00000484596 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
UBR3-210ENST00000484596 GALNT11Q8NCW6 608 aa11.63□□□□□ -0.55
UBR3-210ENST00000484596 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
UBR3-210ENST00000484596 ALX3O95076 343 aa11.62□□□□□ -0.55
UBR3-210ENST00000484596 AKTIPQ9H8T0 292 aa11.62□□□□□ -0.55
UBR3-210ENST00000484596 SH2B1Q9NRF2 756 aaPredicted RBP11.62□□□□□ -0.55
UBR3-210ENST00000484596 CCDC87Q9NVE4 849 aa11.62□□□□□ -0.55
UBR3-210ENST00000484596 PRSS36Q5K4E3 855 aa11.61□□□□□ -0.55
UBR3-210ENST00000484596 TMEM130Q8N3G9 435 aa11.61□□□□□ -0.55
UBR3-210ENST00000484596 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
UBR3-210ENST00000484596 PMEPA1Q969W9 287 aa11.61□□□□□ -0.55
UBR3-210ENST00000484596 MEGF10Q96KG7 1140 aa11.61□□□□□ -0.55
UBR3-210ENST00000484596 F8W735 103 aaPredicted RBP11.6□□□□□ -0.55
UBR3-210ENST00000484596 NFKBIEO00221 500 aa11.6□□□□□ -0.55
UBR3-210ENST00000484596 EPHA1P21709 976 aa11.6□□□□□ -0.55
UBR3-210ENST00000484596 ADAM19Q9H013 955 aa11.6□□□□□ -0.55
UBR3-210ENST00000484596 TNFRSF21O75509 655 aa11.59□□□□□ -0.55
UBR3-210ENST00000484596 TRPA1O75762 1119 aa11.59□□□□□ -0.55
UBR3-210ENST00000484596 PTPRAP18433 802 aa11.59□□□□□ -0.55
UBR3-210ENST00000484596 USP5P45974 858 aa11.59□□□□□ -0.55
UBR3-210ENST00000484596 DZANK1Q9NVP4 752 aa11.59□□□□□ -0.55
UBR3-210ENST00000484596 TM4SF5O14894 197 aa11.58□□□□□ -0.56
UBR3-210ENST00000484596 EREGO14944 169 aa11.58□□□□□ -0.56
UBR3-210ENST00000484596 EHHADHQ08426 723 aa11.58□□□□□ -0.56
UBR3-210ENST00000484596 CARD10Q9BWT7 1032 aa11.58□□□□□ -0.56
UBR3-210ENST00000484596 FOXD3Q9UJU5 478 aaPredicted RBP11.58□□□□□ -0.56
UBR3-210ENST00000484596 FSCN2O14926 492 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 PHACTR2O75167 634 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 CD68P34810 354 aaPredicted RBP11.57□□□□□ -0.56
UBR3-210ENST00000484596 ARHGAP4P98171 946 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 ECM1Q16610 540 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 DZIP1LQ8IYY4 767 aaKnown RBP11.57□□□□□ -0.56
UBR3-210ENST00000484596 Q8N3U1 123 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 HHIPQ96QV1 700 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 KCNK4Q9NYG8 393 aa11.57□□□□□ -0.56
UBR3-210ENST00000484596 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
UBR3-210ENST00000484596 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
UBR3-210ENST00000484596 FAM117BQ6P1L5 589 aa11.56□□□□□ -0.56
UBR3-210ENST00000484596 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
UBR3-210ENST00000484596 GJD3Q8N144 294 aa11.56□□□□□ -0.56
UBR3-210ENST00000484596 AGGF1Q8N302 714 aaeCLIP11.56□□□□□ -0.56
UBR3-210ENST00000484596 SNX29Q8TEQ0 813 aa11.56□□□□□ -0.56
UBR3-210ENST00000484596 FAM177BA6PVY3 158 aa11.55□□□□□ -0.56
UBR3-210ENST00000484596 PDE2AO00408 941 aaPredicted RBP11.55□□□□□ -0.56
UBR3-210ENST00000484596 NDUFB5O43674 189 aa11.55□□□□□ -0.56
UBR3-210ENST00000484596 XP32Q5T750 250 aa11.55□□□□□ -0.56
UBR3-210ENST00000484596 DCTN4Q9UJW0 460 aa11.55□□□□□ -0.56
UBR3-210ENST00000484596 BRPF3Q9ULD4 1205 aa11.55□□□□□ -0.56
UBR3-210ENST00000484596 WISP1O95388 367 aa11.54□□□□□ -0.56
UBR3-210ENST00000484596 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.54□□□□□ -0.56
UBR3-210ENST00000484596 KLHL23Q8NBE8 558 aa11.54□□□□□ -0.56
UBR3-210ENST00000484596 CITED4Q96RK1 184 aa11.54□□□□□ -0.56
UBR3-210ENST00000484596 OSMRQ99650 979 aa11.54□□□□□ -0.56
UBR3-210ENST00000484596 ERCC3P19447 782 aa11.53□□□□□ -0.56
UBR3-210ENST00000484596 ZKSCAN3Q9BRR0 538 aa11.53□□□□□ -0.56
UBR3-210ENST00000484596 H3BRJ5 948 aa11.52□□□□□ -0.57
UBR3-210ENST00000484596 DDX3YO15523 660 aaKnown RBP11.52□□□□□ -0.57
UBR3-210ENST00000484596 CABP4P57796 275 aa11.52□□□□□ -0.57
UBR3-210ENST00000484596 Q6ZS46 218 aa11.52□□□□□ -0.57
UBR3-210ENST00000484596 TMEM102Q8N9M5 508 aaPredicted RBP11.52□□□□□ -0.57
UBR3-210ENST00000484596 NXPE3Q969Y0 559 aa11.52□□□□□ -0.57
UBR3-210ENST00000484596 KLHDC7BQ96G42 594 aa11.52□□□□□ -0.57
UBR3-210ENST00000484596 EDN3P14138 238 aa11.51□□□□□ -0.57
UBR3-210ENST00000484596 GLB1P16278 677 aa11.51□□□□□ -0.57
UBR3-210ENST00000484596 MAPK1P28482 360 aa11.51□□□□□ -0.57
UBR3-210ENST00000484596 ACAD11Q709F0 780 aa11.51□□□□□ -0.57
UBR3-210ENST00000484596 ZSCAN29Q8IWY8 852 aaPredicted RBP11.51□□□□□ -0.57
UBR3-210ENST00000484596 ZFYVE28Q9HCC9 887 aa11.51□□□□□ -0.57
UBR3-210ENST00000484596 SEC31BQ9NQW1 1179 aa11.51□□□□□ -0.57
UBR3-210ENST00000484596 ADAM11O75078 769 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms