RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 C16orf71Q8IYS4 520 aaPredicted RBP19.4■□□□□ 0.7
RPP40-206ENST00000483546 VGLL2Q8N8G2 317 aa19.4■□□□□ 0.7
RPP40-206ENST00000483546 IRS2Q9Y4H2 1338 aa19.4■□□□□ 0.7
RPP40-206ENST00000483546 RAD17O75943 681 aa19.39■□□□□ 0.69
RPP40-206ENST00000483546 RPS12P25398 132 aaKnown RBP19.39■□□□□ 0.69
RPP40-206ENST00000483546 LMOD1P29536 600 aaPredicted RBP19.39■□□□□ 0.69
RPP40-206ENST00000483546 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.69
RPP40-206ENST00000483546 ATG9AQ7Z3C6 839 aa19.39■□□□□ 0.69
RPP40-206ENST00000483546 SSH3Q8TE77 659 aa19.39■□□□□ 0.69
RPP40-206ENST00000483546 HACL1Q9UJ83 578 aa19.39■□□□□ 0.69
RPP40-206ENST00000483546 WTIPA6NIX2 430 aaPredicted RBP19.38■□□□□ 0.69
RPP40-206ENST00000483546 POTECB2RU33 542 aa19.38■□□□□ 0.69
RPP40-206ENST00000483546 TOMM70O94826 608 aa19.38■□□□□ 0.69
RPP40-206ENST00000483546 POLA2Q14181 598 aa19.38■□□□□ 0.69
RPP40-206ENST00000483546 ZBTB40Q9NUA8 1239 aa19.38■□□□□ 0.69
RPP40-206ENST00000483546 CEP126Q9P2H0 1117 aa19.38■□□□□ 0.69
RPP40-206ENST00000483546 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
RPP40-206ENST00000483546 VIL1P09327 827 aaKnown RBP19.37■□□□□ 0.69
RPP40-206ENST00000483546 TXNRD3Q86VQ6 643 aa19.37■□□□□ 0.69
RPP40-206ENST00000483546 DPF2Q92785 391 aa19.37■□□□□ 0.69
RPP40-206ENST00000483546 SIL1Q9H173 461 aa19.37■□□□□ 0.69
RPP40-206ENST00000483546 USP17L3A6NCW0 530 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 USP17L4A6NCW7 530 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 PSMD14O00487 310 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
RPP40-206ENST00000483546 KLRK1P26718 216 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 SCNN1DP51172 638 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 C20orf194Q5TEA3 1177 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 USP17L1Q7RTZ2 530 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 PNMA8AQ86V59 439 aaPredicted RBP19.36■□□□□ 0.69
RPP40-206ENST00000483546 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
RPP40-206ENST00000483546 RBM46Q8TBY0 533 aaKnown RBP19.36■□□□□ 0.69
RPP40-206ENST00000483546 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
RPP40-206ENST00000483546 C1orf115Q9H7X2 142 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 CD209Q9NNX6 404 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 GPRC5DQ9NZD1 345 aa19.36■□□□□ 0.69
RPP40-206ENST00000483546 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
RPP40-206ENST00000483546 ZNF646O15015 1829 aaPredicted RBP19.36■□□□□ 0.69
RPP40-206ENST00000483546 MYO3BQ8WXR4 1341 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 ARAP2Q8WZ64 1704 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 SNAP23O00161 211 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 IL1R1P14778 569 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 FGFR2P21802 821 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 G3BP1Q13283 466 aaKnown RBP eCLIP19.35■□□□□ 0.69
RPP40-206ENST00000483546 CAVIN4Q5BKX8 364 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 STRIP1Q5VSL9 837 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 AGBL3Q8NEM8 1001 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 LPIN2Q92539 896 aa19.35■□□□□ 0.69
RPP40-206ENST00000483546 HMMRO75330 724 aa19.34■□□□□ 0.69
RPP40-206ENST00000483546 SLC5A1P13866 664 aa19.34■□□□□ 0.69
RPP40-206ENST00000483546 HIBADHP31937 336 aaKnown RBP19.34■□□□□ 0.69
RPP40-206ENST00000483546 EPHX2P34913 555 aa19.34■□□□□ 0.69
RPP40-206ENST00000483546 GMPSP49915 693 aaPredicted RBP19.34■□□□□ 0.69
RPP40-206ENST00000483546 MMP14P50281 582 aa19.34■□□□□ 0.69
RPP40-206ENST00000483546 AKAP2Q9Y2D5 859 aa19.34■□□□□ 0.69
RPP40-206ENST00000483546 RSBN1LQ6PCB5 846 aaPredicted RBP19.33■□□□□ 0.68
RPP40-206ENST00000483546 FAM84BQ96KN1 310 aaPredicted RBP19.33■□□□□ 0.68
RPP40-206ENST00000483546 KCNQ5Q9NR82 932 aa19.33■□□□□ 0.68
RPP40-206ENST00000483546 ADARB2Q9NS39 739 aaKnown RBP19.33■□□□□ 0.68
RPP40-206ENST00000483546 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.68
RPP40-206ENST00000483546 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 MYH13Q9UKX3 1938 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 H7C1D1 291 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 FSTL1Q12841 308 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 ATP2B3Q16720 1220 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 USP50Q70EL3 339 aaPredicted RBP19.32■□□□□ 0.68
RPP40-206ENST00000483546 FBXO33Q7Z6M2 555 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 VPS37DQ86XT2 251 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 SMC1BQ8NDV3 1235 aa19.32■□□□□ 0.68
RPP40-206ENST00000483546 ZBTB22O15209 634 aa19.31■□□□□ 0.68
RPP40-206ENST00000483546 SASH1O94885 1247 aa19.31■□□□□ 0.68
RPP40-206ENST00000483546 FKBP1AP62942 108 aaKnown RBP19.31■□□□□ 0.68
RPP40-206ENST00000483546 DACT2Q5SW24 774 aa19.31■□□□□ 0.68
RPP40-206ENST00000483546 TTLL5Q6EMB2 1281 aa19.31■□□□□ 0.68
RPP40-206ENST00000483546 LDHDQ86WU2 507 aa19.31■□□□□ 0.68
RPP40-206ENST00000483546 TDRD7Q8NHU6 1098 aaKnown RBP19.31■□□□□ 0.68
RPP40-206ENST00000483546 CNOT7Q9UIV1 285 aaKnown RBP19.31■□□□□ 0.68
RPP40-206ENST00000483546 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
RPP40-206ENST00000483546 EPS15P42566 896 aa19.3■□□□□ 0.68
RPP40-206ENST00000483546 GYG1P46976 350 aa19.3■□□□□ 0.68
RPP40-206ENST00000483546 C1QTNF8P60827 252 aa19.3■□□□□ 0.68
RPP40-206ENST00000483546 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
RPP40-206ENST00000483546 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
RPP40-206ENST00000483546 FAM205AQ6ZU69 1335 aa19.29■□□□□ 0.68
RPP40-206ENST00000483546 GTF2IP78347 998 aa19.29■□□□□ 0.68
RPP40-206ENST00000483546 OS9Q13438 667 aaPredicted RBP19.29■□□□□ 0.68
RPP40-206ENST00000483546 AAMPQ13685 434 aa19.29■□□□□ 0.68
RPP40-206ENST00000483546 ERC1Q8IUD2 1116 aa19.29■□□□□ 0.68
RPP40-206ENST00000483546 MICALL2Q8IY33 904 aa19.29■□□□□ 0.68
RPP40-206ENST00000483546 GMLQ99445 158 aa19.29■□□□□ 0.68
RPP40-206ENST00000483546 GPR108Q9NPR9 543 aa19.29■□□□□ 0.68
RPP40-206ENST00000483546 TFCP2Q12800 502 aa19.28■□□□□ 0.68
RPP40-206ENST00000483546 GNL3LQ9NVN8 582 aaKnown RBP19.28■□□□□ 0.68
RPP40-206ENST00000483546 USP17L8P0C7I0 530 aa19.27■□□□□ 0.68
RPP40-206ENST00000483546 ZNF280AP59817 542 aaPredicted RBP19.27■□□□□ 0.68
RPP40-206ENST00000483546 EAPPQ56P03 285 aaPredicted RBP19.27■□□□□ 0.68
RPP40-206ENST00000483546 CHADLQ6NUI6 762 aa19.27■□□□□ 0.68
RPP40-206ENST00000483546 OGFOD1Q8N543 542 aa19.27■□□□□ 0.68
RPP40-206ENST00000483546 ZC3H15Q8WU90 426 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms