RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 CEP350Q5VT06 3117 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 SMARCA5O60264 1052 aaPredicted RBP12.9□□□□□ -0.34
CCDC57-209ENST00000483145 TAF5LO75529 589 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 UBE4AQ14139 1066 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 ATP2B3Q16720 1220 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 LPIN2Q92539 896 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 LEMD3Q9Y2U8 911 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
CCDC57-209ENST00000483145 ZNF804BA4D1E1 1349 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 A0A1B0GUL7 405 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 SLC5A1P13866 664 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 VEGFAP15692 232 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-209ENST00000483145 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 KCNJ4P48050 445 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 FSTL1Q12841 308 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 DPP8Q6V1X1 898 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-209ENST00000483145 AACSQ86V21 672 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 MPNDQ8N594 471 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 EAF2Q96CJ1 260 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-209ENST00000483145 RTFDC1Q9BY42 306 aaPredicted RBP12.89□□□□□ -0.35
CCDC57-209ENST00000483145 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
CCDC57-209ENST00000483145 NSFL1CQ9UNZ2 370 aaKnown RBP12.89□□□□□ -0.35
CCDC57-209ENST00000483145 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
CCDC57-209ENST00000483145 UFL1O94874 794 aa12.88□□□□□ -0.35
CCDC57-209ENST00000483145 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
CCDC57-209ENST00000483145 C15orf52Q6ZUT6 534 aaKnown RBP12.88□□□□□ -0.35
CCDC57-209ENST00000483145 SMC1BQ8NDV3 1235 aa12.88□□□□□ -0.35
CCDC57-209ENST00000483145 TBC1D16Q8TBP0 767 aa12.88□□□□□ -0.35
CCDC57-209ENST00000483145 PSMD1Q99460 953 aa12.88□□□□□ -0.35
CCDC57-209ENST00000483145 MED23Q9ULK4 1368 aa12.88□□□□□ -0.35
CCDC57-209ENST00000483145 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
CCDC57-209ENST00000483145 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
CCDC57-209ENST00000483145 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC57-209ENST00000483145 POLLQ9UGP5 575 aa12.87□□□□□ -0.35
CCDC57-209ENST00000483145 DBNLQ9UJU6 430 aaKnown RBP12.87□□□□□ -0.35
CCDC57-209ENST00000483145 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
CCDC57-209ENST00000483145 MYH13Q9UKX3 1938 aa12.86□□□□□ -0.35
CCDC57-209ENST00000483145 SNAP23O00161 211 aa12.86□□□□□ -0.35
CCDC57-209ENST00000483145 TIMM10P62072 90 aa12.86□□□□□ -0.35
CCDC57-209ENST00000483145 SUPT20HQ8NEM7 779 aa12.86□□□□□ -0.35
CCDC57-209ENST00000483145 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
CCDC57-209ENST00000483145 EYA3Q99504 573 aa12.86□□□□□ -0.35
CCDC57-209ENST00000483145 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
CCDC57-209ENST00000483145 TLR7Q9NYK1 1049 aaKnown RBP12.86□□□□□ -0.35
CCDC57-209ENST00000483145 WTIPA6NIX2 430 aaPredicted RBP12.85□□□□□ -0.35
CCDC57-209ENST00000483145 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 MX1P20591 662 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 KLRK1P26718 216 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 PDE4AP27815 886 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 ADORA1P30542 326 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 GPATCH3Q96I76 525 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 CCDC8Q9H0W5 538 aaPredicted RBP12.85□□□□□ -0.35
CCDC57-209ENST00000483145 AOX1Q06278 1338 aa12.85□□□□□ -0.35
CCDC57-209ENST00000483145 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
CCDC57-209ENST00000483145 ZBTB22O15209 634 aa12.84□□□□□ -0.35
CCDC57-209ENST00000483145 DDNO94850 711 aaPredicted RBP12.84□□□□□ -0.35
CCDC57-209ENST00000483145 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
CCDC57-209ENST00000483145 OTUD7AQ8TE49 926 aaPredicted RBP12.84□□□□□ -0.35
CCDC57-209ENST00000483145 VPS33BQ9H267 617 aa12.84□□□□□ -0.35
CCDC57-209ENST00000483145 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
CCDC57-209ENST00000483145 WDR90Q96KV7 1748 aa12.84□□□□□ -0.35
CCDC57-209ENST00000483145 TTC41PQ6P2S7 1318 aa12.84□□□□□ -0.35
CCDC57-209ENST00000483145 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
CCDC57-209ENST00000483145 PDE1AP54750 535 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 KIAA2012Q0VF49 1180 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 WASHC4Q2M389 1173 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 CCDC102BQ68D86 513 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 ZNF804AQ7Z570 1209 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 ZNF512BQ96KM6 892 aaPredicted RBP12.83□□□□□ -0.36
CCDC57-209ENST00000483145 FAM84BQ96KN1 310 aaPredicted RBP12.83□□□□□ -0.36
CCDC57-209ENST00000483145 GPR101Q96P66 508 aaPredicted RBP12.83□□□□□ -0.36
CCDC57-209ENST00000483145 ZC3H12CQ9C0D7 883 aaKnown RBP12.83□□□□□ -0.36
CCDC57-209ENST00000483145 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 OSBPL3Q9H4L5 887 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.36
CCDC57-209ENST00000483145 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 ARID4AP29374 1257 aaPredicted RBP12.82□□□□□ -0.36
CCDC57-209ENST00000483145 HIBADHP31937 336 aaKnown RBP12.82□□□□□ -0.36
CCDC57-209ENST00000483145 PHKA1P46020 1223 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 GYG1P46976 350 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 VPS37DQ86XT2 251 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
CCDC57-209ENST00000483145 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
CCDC57-209ENST00000483145 PSME4Q14997 1843 aa12.82□□□□□ -0.36
CCDC57-209ENST00000483145 POTECB2RU33 542 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms