RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MPSTP25325 297 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 CDC27P30260 824 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 MTMR3Q13615 1198 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 NOM1Q5C9Z4 860 aaKnown RBP6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 NCAPG2Q86XI2 1143 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 MAP4K3Q8IVH8 894 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 CACTIN-AS1Q8N1I8 211 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 TMEM130Q8N3G9 435 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 CEP120Q8N960 986 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 GTF3C2Q8WUA4 911 aaPredicted RBP6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 MUC3BQ9H195 1237 aa6.52□□□□□ -1.37
LAPTM4A-202ENST00000483117 WISP1O95388 367 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 PDGFAP04085 211 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 SSFA2P28290 1259 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 EIF1AXP47813 144 aaKnown RBP6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 C8orf34Q49A92 452 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 DZIP1LQ8IYY4 767 aaKnown RBP6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 C1orf127Q8N9H9 656 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 POP1Q99575 1024 aaKnown RBP6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 CARD10Q9BWT7 1032 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 SH2B1Q9NRF2 756 aaPredicted RBP6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 KCNK4Q9NYG8 393 aa6.51□□□□□ -1.37
LAPTM4A-202ENST00000483117 EPHA1P21709 976 aa6.5□□□□□ -1.37
LAPTM4A-202ENST00000483117 MCTP1Q6DN14 999 aa6.5□□□□□ -1.37
LAPTM4A-202ENST00000483117 PRR23CQ6ZRP0 262 aa6.5□□□□□ -1.37
LAPTM4A-202ENST00000483117 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.5□□□□□ -1.37
LAPTM4A-202ENST00000483117 TM4SF5O14894 197 aa6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 PAX4O43316 350 aa6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 TRPA1O75762 1119 aa6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 GLB1P16278 677 aa6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 CD68P34810 354 aaPredicted RBP6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 XKR5Q6UX68 686 aa6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 Q6ZS46 218 aa6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 SALL4Q9UJQ4 1053 aa6.49□□□□□ -1.37
LAPTM4A-202ENST00000483117 FSCN2O14926 492 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 DDX3YO15523 660 aaKnown RBP6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 PPP1R15AO75807 674 aaPredicted RBP6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 RPLP1P05386 114 aaKnown RBP6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 PCSK2P16519 638 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 PTPRAP18433 802 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 CES1P23141 567 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 MZF1P28698 734 aaPredicted RBP6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 ACAD11Q709F0 780 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 DCAF11Q8TEB1 546 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 FMNL2Q96PY5 1086 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 HHIPQ96QV1 700 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 UBL7Q96S82 380 aaPredicted RBP6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 CHRDQ9H2X0 955 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 POLIQ9UNA4 740 aa6.48□□□□□ -1.37
LAPTM4A-202ENST00000483117 NFKBIEO00221 500 aa6.47□□□□□ -1.37
LAPTM4A-202ENST00000483117 LRP8Q14114 963 aa6.47□□□□□ -1.37
LAPTM4A-202ENST00000483117 PHLDB3Q6NSJ2 640 aa6.47□□□□□ -1.37
LAPTM4A-202ENST00000483117 TTC16Q8NEE8 873 aa6.47□□□□□ -1.37
LAPTM4A-202ENST00000483117 KLHDC7BQ96G42 594 aa6.47□□□□□ -1.37
LAPTM4A-202ENST00000483117 ADAM19Q9H013 955 aa6.47□□□□□ -1.37
LAPTM4A-202ENST00000483117 DZANK1Q9NVP4 752 aa6.47□□□□□ -1.37
LAPTM4A-202ENST00000483117 HYAL3O43820 417 aaPredicted RBP6.46□□□□□ -1.38
LAPTM4A-202ENST00000483117 ADAM11O75078 769 aa6.46□□□□□ -1.38
LAPTM4A-202ENST00000483117 AAMPQ13685 434 aa6.46□□□□□ -1.38
LAPTM4A-202ENST00000483117 FAM117BQ6P1L5 589 aa6.46□□□□□ -1.38
LAPTM4A-202ENST00000483117 FOXD4L4Q8WXT5 416 aaPredicted RBP6.46□□□□□ -1.38
LAPTM4A-202ENST00000483117 ANO2Q9NQ90 1003 aa6.46□□□□□ -1.38
LAPTM4A-202ENST00000483117 SEC31BQ9NQW1 1179 aa6.46□□□□□ -1.38
LAPTM4A-202ENST00000483117 FAM177BA6PVY3 158 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 EREGO14944 169 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 FSTP19883 344 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 DUOXA2Q1HG44 320 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 ALKBH2Q6NS38 261 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 KIAA1211Q6ZU35 1233 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 KLHL23Q8NBE8 558 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 UBASH3BQ8TF42 649 aa6.45□□□□□ -1.38
LAPTM4A-202ENST00000483117 H3BRJ5 948 aa6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 PDE2AO00408 941 aaPredicted RBP6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 ABL1P00519 1130 aa6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 NPR3P17342 541 aa6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 ZNF211Q13398 564 aaPredicted RBP6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 ARMC10Q8N2F6 343 aa6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 SLC7A3Q8WY07 619 aa6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 FOXD3Q9UJU5 478 aaPredicted RBP6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 RNF112Q9ULX5 631 aa6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 RAXQ9Y2V3 346 aa6.44□□□□□ -1.38
LAPTM4A-202ENST00000483117 FZD6O60353 706 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 TNFRSF21O75509 655 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 FAM13AO94988 1023 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 CABP4P57796 275 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 HGSNATQ68CP4 663 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 C14orf37Q86TY3 774 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 PMEPA1Q969W9 287 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 OSMRQ99650 979 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 CCDC87Q9NVE4 849 aa6.43□□□□□ -1.38
LAPTM4A-202ENST00000483117 PHACTR2O75167 634 aa6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 NLRP12P59046 1061 aa6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 PIP4K2BP78356 416 aa6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 FKBP4Q02790 459 aaKnown RBP eCLIP6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 TMEM102Q8N9M5 508 aaPredicted RBP6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 ZKSCAN3Q9BRR0 538 aa6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 CEP41Q9BYV8 373 aa6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 SOX13Q9UN79 622 aa6.42□□□□□ -1.38
LAPTM4A-202ENST00000483117 DHX15O43143 795 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms