RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 NEFMP07197 916 aa10.28□□□□□ -0.76
SYN3-212ENST00000483062 NBPF9Q3BBW0 867 aa10.28□□□□□ -0.76
SYN3-212ENST00000483062 FAM89AQ96GI7 184 aa10.28□□□□□ -0.76
SYN3-212ENST00000483062 TRIM17Q9Y577 477 aa10.28□□□□□ -0.76
SYN3-212ENST00000483062 CEP290O15078 2479 aa10.28□□□□□ -0.76
SYN3-212ENST00000483062 TAF1P21675 1872 aa10.27□□□□□ -0.76
SYN3-212ENST00000483062 WNT10BO00744 389 aa10.27□□□□□ -0.77
SYN3-212ENST00000483062 ALDH1A1P00352 501 aa10.27□□□□□ -0.77
SYN3-212ENST00000483062 EIF2S2P20042 333 aaKnown RBP10.27□□□□□ -0.77
SYN3-212ENST00000483062 INHBEP58166 350 aa10.27□□□□□ -0.77
SYN3-212ENST00000483062 TRIM28Q13263 835 aaKnown RBP10.27□□□□□ -0.77
SYN3-212ENST00000483062 IFNL1Q8IU54 200 aa10.27□□□□□ -0.77
SYN3-212ENST00000483062 BABAM1Q9NWV8 329 aa10.27□□□□□ -0.77
SYN3-212ENST00000483062 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
SYN3-212ENST00000483062 DDX60Q8IY21 1712 aaKnown RBP10.27□□□□□ -0.77
SYN3-212ENST00000483062 CUL9Q8IWT3 2517 aa10.27□□□□□ -0.77
SYN3-212ENST00000483062 USP17L3A6NCW0 530 aa10.26□□□□□ -0.77
SYN3-212ENST00000483062 USP17L4A6NCW7 530 aa10.26□□□□□ -0.77
SYN3-212ENST00000483062 IGF2BP3O00425 579 aaKnown RBP eCLIP10.26□□□□□ -0.77
SYN3-212ENST00000483062 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
SYN3-212ENST00000483062 MKRN3Q13064 507 aaKnown RBP10.26□□□□□ -0.77
SYN3-212ENST00000483062 RALBP1Q15311 655 aa10.26□□□□□ -0.77
SYN3-212ENST00000483062 MAP3K11Q16584 847 aa10.26□□□□□ -0.77
SYN3-212ENST00000483062 USP17L1Q7RTZ2 530 aa10.26□□□□□ -0.77
SYN3-212ENST00000483062 PODNQ7Z5L7 613 aa10.26□□□□□ -0.77
SYN3-212ENST00000483062 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
SYN3-212ENST00000483062 LAMA3Q16787 3333 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 MANSC4A6NHS7 340 aaPredicted RBP10.25□□□□□ -0.77
SYN3-212ENST00000483062 WTIPA6NIX2 430 aaPredicted RBP10.25□□□□□ -0.77
SYN3-212ENST00000483062 ANP32CO43423 234 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 UFL1O94874 794 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 DACT2Q5SW24 774 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 PLBD2Q8NHP8 589 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 ZNF428Q96B54 188 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 ZBED3Q96IU2 234 aaPredicted RBP10.25□□□□□ -0.77
SYN3-212ENST00000483062 ZNF333Q96JL9 665 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 SEC31BQ9NQW1 1179 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 TSPYL4Q9UJ04 414 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 GGA1Q9UJY5 639 aa10.25□□□□□ -0.77
SYN3-212ENST00000483062 C19orf67A6NJJ6 358 aa10.24□□□□□ -0.77
SYN3-212ENST00000483062 H0YGN5 161 aa10.24□□□□□ -0.77
SYN3-212ENST00000483062 DLL1O00548 723 aa10.24□□□□□ -0.77
SYN3-212ENST00000483062 ARMC9Q7Z3E5 817 aa10.24□□□□□ -0.77
SYN3-212ENST00000483062 PRO3102Q9H379 93 aa10.24□□□□□ -0.77
SYN3-212ENST00000483062 RBBP6Q7Z6E9 1792 aaKnown RBP10.24□□□□□ -0.77
SYN3-212ENST00000483062 TESPA1A2RU30 521 aaPredicted RBP10.23□□□□□ -0.77
SYN3-212ENST00000483062 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
SYN3-212ENST00000483062 IRS4O14654 1257 aaPredicted RBP10.23□□□□□ -0.77
SYN3-212ENST00000483062 ZBTB48P10074 688 aaPredicted RBP10.23□□□□□ -0.77
SYN3-212ENST00000483062 MMP14P50281 582 aa10.23□□□□□ -0.77
SYN3-212ENST00000483062 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
SYN3-212ENST00000483062 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
SYN3-212ENST00000483062 CD99L2Q8TCZ2 262 aa10.23□□□□□ -0.77
SYN3-212ENST00000483062 ERO1AQ96HE7 468 aa10.23□□□□□ -0.77
SYN3-212ENST00000483062 MXD3Q9BW11 206 aa10.23□□□□□ -0.77
SYN3-212ENST00000483062 ANKIB1Q9P2G1 1089 aa10.23□□□□□ -0.77
SYN3-212ENST00000483062 ATP5J2-PTCD1G3V325 749 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 NF2P35240 595 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 GJA5P36382 358 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 LMOD3Q0VAK6 560 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 CRHR2Q13324 411 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 KRT24Q2M2I5 525 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 WNK4Q96J92 1243 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 PTPN18Q99952 460 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 EFCC1Q9HA90 598 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 FZD1Q9UP38 647 aa10.22□□□□□ -0.77
SYN3-212ENST00000483062 MYBBP1AQ9BQG0 1328 aaKnown RBP10.22□□□□□ -0.77
SYN3-212ENST00000483062 G3V3G9 751 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 TMPOP42166 694 aaKnown RBP10.21□□□□□ -0.77
SYN3-212ENST00000483062 RIPK4P57078 832 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 RTL5Q5HYW3 569 aaPredicted RBP10.21□□□□□ -0.77
SYN3-212ENST00000483062 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 STRIP1Q5VSL9 837 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 ZBTB38Q8NAP3 1195 aaPredicted RBP10.21□□□□□ -0.77
SYN3-212ENST00000483062 SLC10A4Q96EP9 437 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 CLMNQ96JQ2 1002 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 CHPF2Q9P2E5 772 aa10.21□□□□□ -0.77
SYN3-212ENST00000483062 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
SYN3-212ENST00000483062 ANGEL1Q9UNK9 670 aaKnown RBP10.21□□□□□ -0.77
SYN3-212ENST00000483062 XDHP47989 1333 aa10.21□□□□□ -0.78
SYN3-212ENST00000483062 SSC5DA1L4H1 1573 aa10.2□□□□□ -0.78
SYN3-212ENST00000483062 CHL1O00533 1208 aa10.2□□□□□ -0.78
SYN3-212ENST00000483062 SP3Q02447 781 aa10.2□□□□□ -0.78
SYN3-212ENST00000483062 PRKG1Q13976 671 aa10.2□□□□□ -0.78
SYN3-212ENST00000483062 DIEXFQ68CQ4 756 aaKnown RBP10.2□□□□□ -0.78
SYN3-212ENST00000483062 APOBEC3FQ8IUX4 373 aaKnown RBP10.2□□□□□ -0.78
SYN3-212ENST00000483062 OGFOD1Q8N543 542 aa10.2□□□□□ -0.78
SYN3-212ENST00000483062 SLC17A8Q8NDX2 589 aa10.2□□□□□ -0.78
SYN3-212ENST00000483062 MYO3BQ8WXR4 1341 aa10.2□□□□□ -0.78
SYN3-212ENST00000483062 PSME4Q14997 1843 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 MED23Q9ULK4 1368 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 SASH1O94885 1247 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 UBE2Q1Q7Z7E8 422 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 MTMR14Q8NCE2 650 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 MS4A4AQ96JQ5 239 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 TMEM106CQ9BVX2 250 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 DEFB129Q9H1M3 183 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 PTCH2Q9Y6C5 1203 aa10.19□□□□□ -0.78
SYN3-212ENST00000483062 MYH3P11055 1940 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms