RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 RBM46Q8TBY0 533 aaKnown RBP20.63■□□□□ 0.89
HMGN1-214ENST00000482733 SIL1Q9H173 461 aa20.63■□□□□ 0.89
HMGN1-214ENST00000482733 TAF1DQ9H5J8 278 aaPredicted RBP20.63■□□□□ 0.89
HMGN1-214ENST00000482733 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
HMGN1-214ENST00000482733 IRS2Q9Y4H2 1338 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 SNAP23O00161 211 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 KLRK1P26718 216 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 GMPSP49915 693 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-214ENST00000482733 SCNN1DP51172 638 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 ATP8B2P98198 1209 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 VGLL2Q8N8G2 317 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 DPF2Q92785 391 aa20.62■□□□□ 0.89
HMGN1-214ENST00000482733 USP17L3A6NCW0 530 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 USP17L4A6NCW7 530 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 VIL1P09327 827 aaKnown RBP20.61■□□□□ 0.89
HMGN1-214ENST00000482733 EPHX2P34913 555 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 C1QTNF8P60827 252 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 PUM3Q15397 648 aaKnown RBP20.61■□□□□ 0.89
HMGN1-214ENST00000482733 USP17L1Q7RTZ2 530 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 PNMA8AQ86V59 439 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-214ENST00000482733 CD209Q9NNX6 404 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 KCNQ5Q9NR82 932 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 GPRC5DQ9NZD1 345 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 CEP126Q9P2H0 1117 aa20.61■□□□□ 0.89
HMGN1-214ENST00000482733 PA2G4Q9UQ80 394 aaKnown RBP20.61■□□□□ 0.89
HMGN1-214ENST00000482733 PNMA6EA0A0J9YXQ4 647 aa20.6■□□□□ 0.89
HMGN1-214ENST00000482733 C1orf115Q9H7X2 142 aa20.6■□□□□ 0.89
HMGN1-214ENST00000482733 IFIT1P09914 478 aaKnown RBP20.59■□□□□ 0.89
HMGN1-214ENST00000482733 RRP1P56182 461 aaKnown RBP20.59■□□□□ 0.89
HMGN1-214ENST00000482733 POLA2Q14181 598 aa20.59■□□□□ 0.89
HMGN1-214ENST00000482733 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
HMGN1-214ENST00000482733 STRIP1Q5VSL9 837 aa20.59■□□□□ 0.89
HMGN1-214ENST00000482733 SSH3Q8TE77 659 aa20.59■□□□□ 0.89
HMGN1-214ENST00000482733 ZBTB40Q9NUA8 1239 aa20.59■□□□□ 0.89
HMGN1-214ENST00000482733 SCN4AP35499 1836 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 IL1R1P14778 569 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 HIBADHP31937 336 aaKnown RBP20.58■□□□□ 0.89
HMGN1-214ENST00000482733 EPS15P42566 896 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 FSTL1Q12841 308 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 G3BP1Q13283 466 aaKnown RBP eCLIP20.58■□□□□ 0.89
HMGN1-214ENST00000482733 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 RSBN1LQ6PCB5 846 aaPredicted RBP20.58■□□□□ 0.89
HMGN1-214ENST00000482733 USP50Q70EL3 339 aaPredicted RBP20.58■□□□□ 0.89
HMGN1-214ENST00000482733 SMC1BQ8NDV3 1235 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 AGBL3Q8NEM8 1001 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 LPIN2Q92539 896 aa20.58■□□□□ 0.89
HMGN1-214ENST00000482733 ADARB2Q9NS39 739 aaKnown RBP20.58■□□□□ 0.89
HMGN1-214ENST00000482733 ZBTB12Q9Y330 459 aaPredicted RBP20.58■□□□□ 0.89
HMGN1-214ENST00000482733 ZNF609O15014 1411 aa20.58■□□□□ 0.88
HMGN1-214ENST00000482733 H7C1D1 291 aa20.57■□□□□ 0.88
HMGN1-214ENST00000482733 SLC5A1P13866 664 aa20.57■□□□□ 0.88
HMGN1-214ENST00000482733 FGFR2P21802 821 aa20.57■□□□□ 0.88
HMGN1-214ENST00000482733 CEP85Q6P2H3 762 aa20.57■□□□□ 0.88
HMGN1-214ENST00000482733 LDHDQ86WU2 507 aa20.57■□□□□ 0.88
HMGN1-214ENST00000482733 VPS37DQ86XT2 251 aa20.57■□□□□ 0.88
HMGN1-214ENST00000482733 FAM84BQ96KN1 310 aaPredicted RBP20.57■□□□□ 0.88
HMGN1-214ENST00000482733 CNOT7Q9UIV1 285 aaKnown RBP20.57■□□□□ 0.88
HMGN1-214ENST00000482733 MYO3BQ8WXR4 1341 aa20.56■□□□□ 0.88
HMGN1-214ENST00000482733 GYG1P46976 350 aa20.56■□□□□ 0.88
HMGN1-214ENST00000482733 EAPPQ56P03 285 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-214ENST00000482733 DACT2Q5SW24 774 aa20.56■□□□□ 0.88
HMGN1-214ENST00000482733 TTLL5Q6EMB2 1281 aa20.56■□□□□ 0.88
HMGN1-214ENST00000482733 RPAP2Q8IXW5 612 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-214ENST00000482733 A0A1B0GUL6 1792 aa20.56■□□□□ 0.88
HMGN1-214ENST00000482733 MMP14P50281 582 aa20.55■□□□□ 0.88
HMGN1-214ENST00000482733 ATP2B3Q16720 1220 aa20.55■□□□□ 0.88
HMGN1-214ENST00000482733 FBXO33Q7Z6M2 555 aa20.55■□□□□ 0.88
HMGN1-214ENST00000482733 MICALL2Q8IY33 904 aa20.55■□□□□ 0.88
HMGN1-214ENST00000482733 FBXW7Q969H0 707 aa20.55■□□□□ 0.88
HMGN1-214ENST00000482733 AKAP2Q9Y2D5 859 aa20.55■□□□□ 0.88
HMGN1-214ENST00000482733 SASH1O94885 1247 aa20.54■□□□□ 0.88
HMGN1-214ENST00000482733 GTF2IP78347 998 aa20.54■□□□□ 0.88
HMGN1-214ENST00000482733 CHADLQ6NUI6 762 aa20.54■□□□□ 0.88
HMGN1-214ENST00000482733 TDRD7Q8NHU6 1098 aaKnown RBP20.54■□□□□ 0.88
HMGN1-214ENST00000482733 HMMRO75330 724 aa20.53■□□□□ 0.88
HMGN1-214ENST00000482733 SURF6O75683 361 aaKnown RBP20.53■□□□□ 0.88
HMGN1-214ENST00000482733 FKBP1AP62942 108 aaKnown RBP20.53■□□□□ 0.88
HMGN1-214ENST00000482733 GMLQ99445 158 aa20.53■□□□□ 0.88
HMGN1-214ENST00000482733 CLEC11AQ9Y240 323 aa20.53■□□□□ 0.88
HMGN1-214ENST00000482733 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
HMGN1-214ENST00000482733 USP17L8P0C7I0 530 aa20.52■□□□□ 0.88
HMGN1-214ENST00000482733 TFCP2Q12800 502 aa20.52■□□□□ 0.88
HMGN1-214ENST00000482733 OS9Q13438 667 aaPredicted RBP20.52■□□□□ 0.88
HMGN1-214ENST00000482733 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.87
HMGN1-214ENST00000482733 POTEIP0CG38 1075 aa20.51■□□□□ 0.87
HMGN1-214ENST00000482733 POTEJP0CG39 1038 aa20.51■□□□□ 0.87
HMGN1-214ENST00000482733 ZNF280AP59817 542 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-214ENST00000482733 SCN9AQ15858 1988 aa20.51■□□□□ 0.87
HMGN1-214ENST00000482733 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
HMGN1-214ENST00000482733 BCAMP50895 628 aa20.5■□□□□ 0.87
HMGN1-214ENST00000482733 HSP90AB4PQ58FF6 505 aa20.5■□□□□ 0.87
HMGN1-214ENST00000482733 OGFOD1Q8N543 542 aa20.5■□□□□ 0.87
HMGN1-214ENST00000482733 ZC3H15Q8WU90 426 aaKnown RBP20.5■□□□□ 0.87
HMGN1-214ENST00000482733 GNL3LQ9NVN8 582 aaKnown RBP20.5■□□□□ 0.87
HMGN1-214ENST00000482733 GPR108Q9NPR9 543 aa20.49■□□□□ 0.87
HMGN1-214ENST00000482733 HDAC9Q9UKV0 1011 aa20.49■□□□□ 0.87
HMGN1-214ENST00000482733 A0A1B0GUL7 405 aa20.48■□□□□ 0.87
HMGN1-214ENST00000482733 SHTN1A0MZ66 631 aa20.48■□□□□ 0.87
HMGN1-214ENST00000482733 ZBTB22O15209 634 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms