RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.29
DDX39B-219ENST00000481456 NLRP12P59046 1061 aa13.21□□□□□ -0.29
DDX39B-219ENST00000481456 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
DDX39B-219ENST00000481456 CARD6Q9BX69 1037 aa13.21□□□□□ -0.29
DDX39B-219ENST00000481456 PHF8Q9UPP1 1060 aa13.21□□□□□ -0.29
DDX39B-219ENST00000481456 QRICH2Q9H0J4 1663 aa13.21□□□□□ -0.29
DDX39B-219ENST00000481456 PATL2C9JE40 543 aaKnown RBP13.21□□□□□ -0.3
DDX39B-219ENST00000481456 PRC1O43663 620 aa13.21□□□□□ -0.3
DDX39B-219ENST00000481456 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.3
DDX39B-219ENST00000481456 RSPH14Q9UHP6 348 aa13.21□□□□□ -0.3
DDX39B-219ENST00000481456 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.3
DDX39B-219ENST00000481456 TUBBP07437 444 aa13.21□□□□□ -0.3
DDX39B-219ENST00000481456 GTF2A1P52655 376 aaPredicted RBP13.21□□□□□ -0.3
DDX39B-219ENST00000481456 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.3
DDX39B-219ENST00000481456 TMEM67Q5HYA8 995 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
DDX39B-219ENST00000481456 KARSQ15046 597 aaKnown RBP13.2□□□□□ -0.3
DDX39B-219ENST00000481456 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 SLC26A6Q9BXS9 759 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 EFCAB6Q5THR3 1501 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
DDX39B-219ENST00000481456 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 CFAP65Q6ZU64 1925 aaKnown RBP13.2□□□□□ -0.3
DDX39B-219ENST00000481456 TFCP2Q12800 502 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
DDX39B-219ENST00000481456 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 ATP2B3Q16720 1220 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 MICALCLQ6ZW33 695 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 HOXC9P31274 260 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 ERCC6LQ2NKX8 1250 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 C10orf67Q8IYJ2 551 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 N4BP3O15049 544 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 PYM1Q9BRP8 204 aaKnown RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 CWC25Q9NXE8 425 aaPredicted RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
DDX39B-219ENST00000481456 GNL3LQ9NVN8 582 aaKnown RBP13.19□□□□□ -0.3
DDX39B-219ENST00000481456 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 ZBTB43O43298 467 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 ERLIN2O94905 339 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 ADCK5Q3MIX3 580 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 CENPHQ9H3R5 247 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 LZTFL1Q9NQ48 299 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
DDX39B-219ENST00000481456 PDE4CQ08493 712 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 FKBP15Q5T1M5 1219 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 OAS2P29728 719 aaKnown RBP13.18□□□□□ -0.3
DDX39B-219ENST00000481456 NCBP1Q09161 790 aaKnown RBP13.18□□□□□ -0.3
DDX39B-219ENST00000481456 IFIT5Q13325 482 aaKnown RBP13.18□□□□□ -0.3
DDX39B-219ENST00000481456 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 TANGO6Q9C0B7 1094 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 IL15P40933 162 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-219ENST00000481456 TUBB2AQ13885 445 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 TUBB2BQ9BVA1 445 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 CEP152O94986 1710 aa13.18□□□□□ -0.3
DDX39B-219ENST00000481456 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-219ENST00000481456 MYO1BO43795 1136 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 SPAG1Q07617 926 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 TTC31Q49AM3 519 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-219ENST00000481456 GIMAP7Q8NHV1 300 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 ZNF202O95125 648 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
DDX39B-219ENST00000481456 ATF3P18847 181 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 ODF2Q5BJF6 829 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
DDX39B-219ENST00000481456 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-219ENST00000481456 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
DDX39B-219ENST00000481456 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
DDX39B-219ENST00000481456 AKR1B15C9JRZ8 316 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-219ENST00000481456 MAP3K12Q12852 859 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 GPR161Q8N6U8 529 aaKnown RBP13.16□□□□□ -0.3
DDX39B-219ENST00000481456 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 GLI2P10070 1586 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 PNPLA6Q8IY17 1366 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 TNRQ92752 1358 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 LMBR1LQ6UX01 489 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
DDX39B-219ENST00000481456 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms