RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PODXL2Q9NZ53 605 aa21.42■■□□□ 1.02
UPF3A-206ENST00000480362 PPP1R1BQ9UD71 204 aaPredicted RBP21.42■■□□□ 1.02
UPF3A-206ENST00000480362 KCNA3P22001 575 aa21.41■■□□□ 1.02
UPF3A-206ENST00000480362 BCAMP50895 628 aa21.41■■□□□ 1.02
UPF3A-206ENST00000480362 CNTROBQ8N137 903 aa21.41■■□□□ 1.02
UPF3A-206ENST00000480362 ZNF512BQ96KM6 892 aaPredicted RBP21.41■■□□□ 1.02
UPF3A-206ENST00000480362 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
UPF3A-206ENST00000480362 UQCRFS1P1P0C7P4 283 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 OLFM4Q6UX06 510 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 KLHL34Q8N239 644 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 ZNF219Q9P2Y4 722 aaPredicted RBP21.4■■□□□ 1.02
UPF3A-206ENST00000480362 GGA1Q9UJY5 639 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 CD2APQ9Y5K6 639 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 SLX4Q8IY92 1834 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 LRRC37AA6NMS7 1700 aa21.4■■□□□ 1.02
UPF3A-206ENST00000480362 DLEC1Q9Y238 1755 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 CDC45O75419 566 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 UFL1O94874 794 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 KLRK1P26718 216 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 ARID4AP29374 1257 aaPredicted RBP21.39■■□□□ 1.01
UPF3A-206ENST00000480362 GYG1P46976 350 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 SCARF1Q14162 830 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 CAVIN4Q5BKX8 364 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 MPNDQ8N594 471 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 TTLL6Q8N841 843 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 EVI5LQ96CN4 794 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 FAM84BQ96KN1 310 aaPredicted RBP21.39■■□□□ 1.01
UPF3A-206ENST00000480362 DNAJC2Q99543 621 aaKnown RBP21.39■■□□□ 1.01
UPF3A-206ENST00000480362 NDUFB9Q9Y6M9 179 aa21.39■■□□□ 1.01
UPF3A-206ENST00000480362 IRS2Q9Y4H2 1338 aa21.38■■□□□ 1.01
UPF3A-206ENST00000480362 FBXO33Q7Z6M2 555 aa21.38■■□□□ 1.01
UPF3A-206ENST00000480362 TBC1D16Q8TBP0 767 aa21.38■■□□□ 1.01
UPF3A-206ENST00000480362 C7orf43Q8WVR3 580 aa21.38■■□□□ 1.01
UPF3A-206ENST00000480362 EDC3Q96F86 508 aaKnown RBP21.38■■□□□ 1.01
UPF3A-206ENST00000480362 SNRKQ9NRH2 765 aa21.38■■□□□ 1.01
UPF3A-206ENST00000480362 POLLQ9UGP5 575 aa21.38■■□□□ 1.01
UPF3A-206ENST00000480362 C6orf229H3BNL8 230 aa21.37■■□□□ 1.01
UPF3A-206ENST00000480362 MCAMP43121 646 aa21.37■■□□□ 1.01
UPF3A-206ENST00000480362 TXNRD3Q86VQ6 643 aa21.37■■□□□ 1.01
UPF3A-206ENST00000480362 GPR101Q96P66 508 aaPredicted RBP21.37■■□□□ 1.01
UPF3A-206ENST00000480362 PIM2Q9P1W9 311 aa21.37■■□□□ 1.01
UPF3A-206ENST00000480362 KIAA1551Q9HCM1 1747 aa21.36■■□□□ 1.01
UPF3A-206ENST00000480362 FKBP4Q02790 459 aaKnown RBP eCLIP21.36■■□□□ 1.01
UPF3A-206ENST00000480362 DPP8Q6V1X1 898 aaPredicted RBP21.36■■□□□ 1.01
UPF3A-206ENST00000480362 TBC1D9Q6ZT07 1266 aa21.36■■□□□ 1.01
UPF3A-206ENST00000480362 C15orf52Q6ZUT6 534 aaKnown RBP21.36■■□□□ 1.01
UPF3A-206ENST00000480362 VPS37DQ86XT2 251 aa21.36■■□□□ 1.01
UPF3A-206ENST00000480362 GNL3LQ9NVN8 582 aaKnown RBP21.36■■□□□ 1.01
UPF3A-206ENST00000480362 PAG1Q9NWQ8 432 aa21.36■■□□□ 1.01
UPF3A-206ENST00000480362 GOLIM4O00461 696 aa21.35■■□□□ 1.01
UPF3A-206ENST00000480362 HIBADHP31937 336 aaKnown RBP21.35■■□□□ 1.01
UPF3A-206ENST00000480362 ZAP70P43403 619 aa21.35■■□□□ 1.01
UPF3A-206ENST00000480362 CC2D2BQ6DHV5 1058 aa21.35■■□□□ 1.01
UPF3A-206ENST00000480362 PI16Q6UXB8 463 aa21.35■■□□□ 1.01
UPF3A-206ENST00000480362 HMG20BQ9P0W2 317 aa21.35■■□□□ 1.01
UPF3A-206ENST00000480362 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
UPF3A-206ENST00000480362 C21orf2O43822 256 aa21.34■■□□□ 1.01
UPF3A-206ENST00000480362 IQSEC3Q9UPP2 1182 aaPredicted RBP21.34■■□□□ 1.01
UPF3A-206ENST00000480362 AK9Q5TCS8 1911 aa21.33■■□□□ 1.01
UPF3A-206ENST00000480362 CHMLP26374 656 aa21.33■■□□□ 1.01
UPF3A-206ENST00000480362 RASGRF1Q13972 1273 aa21.33■■□□□ 1.01
UPF3A-206ENST00000480362 CASC1Q6TDU7 716 aa21.33■■□□□ 1.01
UPF3A-206ENST00000480362 SPATA5Q8NB90 893 aa21.33■■□□□ 1.01
UPF3A-206ENST00000480362 FSD1Q9BTV5 496 aa21.33■■□□□ 1.01
UPF3A-206ENST00000480362 ANTXR1Q9H6X2 564 aa21.33■■□□□ 1.01
UPF3A-206ENST00000480362 AKAP11Q9UKA4 1901 aa21.32■■□□□ 1
UPF3A-206ENST00000480362 ZNF804AQ7Z570 1209 aa21.32■■□□□ 1
UPF3A-206ENST00000480362 KBTBD3Q8NAB2 608 aa21.32■■□□□ 1
UPF3A-206ENST00000480362 RIMBP2O15034 1052 aa21.31■■□□□ 1
UPF3A-206ENST00000480362 SEC24BO95487 1268 aa21.31■■□□□ 1
UPF3A-206ENST00000480362 DALRD3Q5D0E6 543 aaKnown RBP21.31■■□□□ 1
UPF3A-206ENST00000480362 WWC3Q9ULE0 1092 aa21.31■■□□□ 1
UPF3A-206ENST00000480362 DENND2AQ9ULE3 1009 aa21.31■■□□□ 1
UPF3A-206ENST00000480362 MED23Q9ULK4 1368 aa21.31■■□□□ 1
UPF3A-206ENST00000480362 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
UPF3A-206ENST00000480362 SEMA3EO15041 775 aa21.3■■□□□ 1
UPF3A-206ENST00000480362 FRAT2O75474 233 aaPredicted RBP21.3■■□□□ 1
UPF3A-206ENST00000480362 CYP2E1P05181 493 aaPredicted RBP21.3■■□□□ 1
UPF3A-206ENST00000480362 GRIPAP1Q4V328 841 aa21.3■■□□□ 1
UPF3A-206ENST00000480362 EYA3Q99504 573 aa21.3■■□□□ 1
UPF3A-206ENST00000480362 ZC3H12CQ9C0D7 883 aaKnown RBP21.3■■□□□ 1
UPF3A-206ENST00000480362 TTF1Q15361 905 aaPredicted RBP21.29■■□□□ 1
UPF3A-206ENST00000480362 WASHC4Q2M389 1173 aa21.29■■□□□ 1
UPF3A-206ENST00000480362 CCDC93Q567U6 631 aa21.29■■□□□ 1
UPF3A-206ENST00000480362 NLGN2Q8NFZ4 835 aa21.29■■□□□ 1
UPF3A-206ENST00000480362 TDRD7Q8NHU6 1098 aaKnown RBP21.29■■□□□ 1
UPF3A-206ENST00000480362 RTFDC1Q9BY42 306 aaPredicted RBP21.29■■□□□ 1
UPF3A-206ENST00000480362 CD209Q9NNX6 404 aa21.29■■□□□ 1
UPF3A-206ENST00000480362 DIAPH3Q9NSV4 1193 aa21.29■■□□□ 1
UPF3A-206ENST00000480362 HIP1O00291 1037 aa21.28■■□□□ 1
UPF3A-206ENST00000480362 ZBTB22O15209 634 aa21.28■■□□□ 1
UPF3A-206ENST00000480362 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
UPF3A-206ENST00000480362 PIH1D3Q9NQM4 214 aaKnown RBP21.28■■□□□ 1
UPF3A-206ENST00000480362 SNED1Q8TER0 1413 aa21.28■■□□□ 1
UPF3A-206ENST00000480362 SOGA3Q5TF21 947 aa21.27■■□□□ 1
UPF3A-206ENST00000480362 SUPT20HQ8NEM7 779 aa21.27■■□□□ 1
UPF3A-206ENST00000480362 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
UPF3A-206ENST00000480362 RFX7Q2KHR2 1363 aa21.26■□□□□ 0.99
UPF3A-206ENST00000480362 IL1R1P14778 569 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms