RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 LDHDQ86WU2 507 aa16.61■□□□□ 0.25
RTN1-205ENST00000474911 ITGA6P23229 1130 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 LMOD1P29536 600 aaPredicted RBP16.6■□□□□ 0.25
RTN1-205ENST00000474911 IGHMBP2P38935 993 aaKnown RBP16.6■□□□□ 0.25
RTN1-205ENST00000474911 TNIP1Q15025 636 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 CIAPIN1Q6FI81 312 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 CHADLQ6NUI6 762 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 GGA1Q9UJY5 639 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 PSME4Q14997 1843 aa16.6■□□□□ 0.25
RTN1-205ENST00000474911 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 UFL1O94874 794 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 POTEIP0CG38 1075 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 POTEJP0CG39 1038 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 ATP2B4P23634 1241 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 RFX5P48382 616 aaPredicted RBP16.59■□□□□ 0.25
RTN1-205ENST00000474911 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 ZC3H12CQ9C0D7 883 aaKnown RBP16.59■□□□□ 0.25
RTN1-205ENST00000474911 LNPKQ9C0E8 428 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 MINPP1Q9UNW1 487 aa16.59■□□□□ 0.25
RTN1-205ENST00000474911 CEP350Q5VT06 3117 aa16.58■□□□□ 0.25
RTN1-205ENST00000474911 APBB1O00213 710 aa16.58■□□□□ 0.24
RTN1-205ENST00000474911 RGS3P49796 1198 aa16.58■□□□□ 0.24
RTN1-205ENST00000474911 OS9Q13438 667 aaPredicted RBP16.58■□□□□ 0.24
RTN1-205ENST00000474911 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
RTN1-205ENST00000474911 ERC1Q8IUD2 1116 aa16.58■□□□□ 0.24
RTN1-205ENST00000474911 COPRSQ9NQ92 184 aa16.58■□□□□ 0.24
RTN1-205ENST00000474911 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.24
RTN1-205ENST00000474911 SCN9AQ15858 1988 aa16.58■□□□□ 0.24
RTN1-205ENST00000474911 A0A1B0GUL6 1792 aa16.58■□□□□ 0.24
RTN1-205ENST00000474911 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
RTN1-205ENST00000474911 RIMBP2O15034 1052 aa16.57■□□□□ 0.24
RTN1-205ENST00000474911 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
RTN1-205ENST00000474911 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
RTN1-205ENST00000474911 MPHOSPH8Q99549 860 aa16.57■□□□□ 0.24
RTN1-205ENST00000474911 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
RTN1-205ENST00000474911 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
RTN1-205ENST00000474911 ECE2O60344 883 aa16.56■□□□□ 0.24
RTN1-205ENST00000474911 RAD17O75943 681 aa16.56■□□□□ 0.24
RTN1-205ENST00000474911 PTPN12Q05209 780 aaKnown RBP16.56■□□□□ 0.24
RTN1-205ENST00000474911 IFIT5Q13325 482 aaKnown RBP16.56■□□□□ 0.24
RTN1-205ENST00000474911 EAPPQ56P03 285 aaPredicted RBP16.56■□□□□ 0.24
RTN1-205ENST00000474911 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
RTN1-205ENST00000474911 KIF1BPQ96EK5 621 aa16.56■□□□□ 0.24
RTN1-205ENST00000474911 RNF216Q9NWF9 866 aaPredicted RBP16.56■□□□□ 0.24
RTN1-205ENST00000474911 PDE4AP27815 886 aa16.55■□□□□ 0.24
RTN1-205ENST00000474911 EPS15P42566 896 aa16.55■□□□□ 0.24
RTN1-205ENST00000474911 RHPN1Q8TCX5 695 aa16.55■□□□□ 0.24
RTN1-205ENST00000474911 GPR101Q96P66 508 aaPredicted RBP16.55■□□□□ 0.24
RTN1-205ENST00000474911 ANKRD2Q9GZV1 360 aa16.55■□□□□ 0.24
RTN1-205ENST00000474911 LEMD3Q9Y2U8 911 aa16.55■□□□□ 0.24
RTN1-205ENST00000474911 MED23Q9ULK4 1368 aa16.55■□□□□ 0.24
RTN1-205ENST00000474911 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
RTN1-205ENST00000474911 GMPSP49915 693 aaPredicted RBP16.54■□□□□ 0.24
RTN1-205ENST00000474911 DOK7Q18PE1 504 aa16.54■□□□□ 0.24
RTN1-205ENST00000474911 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
RTN1-205ENST00000474911 SIL1Q9H173 461 aa16.54■□□□□ 0.24
RTN1-205ENST00000474911 ADARB2Q9NS39 739 aaKnown RBP16.54■□□□□ 0.24
RTN1-205ENST00000474911 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
RTN1-205ENST00000474911 PASKQ96RG2 1323 aa16.54■□□□□ 0.24
RTN1-205ENST00000474911 PSMD14O00487 310 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 DNAJC5GQ8N7S2 189 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 DPF2Q92785 391 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 ZNF609O15014 1411 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 G3V3G9 751 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 CIAO1O76071 339 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 ITGBL1O95965 494 aaPredicted RBP16.53■□□□□ 0.24
RTN1-205ENST00000474911 RPS12P25398 132 aaKnown RBP16.53■□□□□ 0.24
RTN1-205ENST00000474911 CHRNDQ07001 517 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 PODNQ7Z5L7 613 aa16.53■□□□□ 0.24
RTN1-205ENST00000474911 EYA2O00167 538 aa16.52■□□□□ 0.23
RTN1-205ENST00000474911 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.23
RTN1-205ENST00000474911 CNOT7Q9UIV1 285 aaKnown RBP16.52■□□□□ 0.23
RTN1-205ENST00000474911 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
RTN1-205ENST00000474911 ZNF804BA4D1E1 1349 aa16.51■□□□□ 0.23
RTN1-205ENST00000474911 WTIPA6NIX2 430 aaPredicted RBP16.51■□□□□ 0.23
RTN1-205ENST00000474911 SASH1O94885 1247 aa16.51■□□□□ 0.23
RTN1-205ENST00000474911 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
RTN1-205ENST00000474911 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
RTN1-205ENST00000474911 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
RTN1-205ENST00000474911 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
RTN1-205ENST00000474911 IL1RAPL2Q9NP60 686 aa16.51■□□□□ 0.23
RTN1-205ENST00000474911 KCNQ5Q9NR82 932 aa16.51■□□□□ 0.23
RTN1-205ENST00000474911 H7C1D1 291 aa16.5■□□□□ 0.23
RTN1-205ENST00000474911 HTRA3P83110 453 aa16.5■□□□□ 0.23
RTN1-205ENST00000474911 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
RTN1-205ENST00000474911 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
RTN1-205ENST00000474911 COA1Q9GZY4 146 aa16.5■□□□□ 0.23
RTN1-205ENST00000474911 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
RTN1-205ENST00000474911 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
RTN1-205ENST00000474911 TRPM7Q96QT4 1865 aa16.49■□□□□ 0.23
RTN1-205ENST00000474911 MAP1SQ66K74 1059 aaPredicted RBP16.49■□□□□ 0.23
RTN1-205ENST00000474911 C15orf52Q6ZUT6 534 aaKnown RBP16.49■□□□□ 0.23
RTN1-205ENST00000474911 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
RTN1-205ENST00000474911 MICALL2Q8IY33 904 aa16.49■□□□□ 0.23
RTN1-205ENST00000474911 ZC3H15Q8WU90 426 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms