RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 ZBTB38Q8NAP3 1195 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 METTL22Q9BUU2 404 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 POLLQ9UGP5 575 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 ZNRF3Q9ULT6 936 aa7.64□□□□□ -1.19
CPSF7-210ENST00000474684 SALL2Q9Y467 1007 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-210ENST00000474684 CDHR2Q9BYE9 1310 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 PI4KAP2A4QPH2 592 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 ZNF316A6NFI3 1004 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-210ENST00000474684 WTIPA6NIX2 430 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-210ENST00000474684 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 PSMD14O00487 310 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 FOXN1O15353 648 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 VEGFBP49765 207 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 TWISTNBQ3B726 338 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-210ENST00000474684 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 PNMA8AQ86V59 439 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-210ENST00000474684 PI4KAP1Q8N8J0 262 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 SUPT20HQ8NEM7 779 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 TBC1D16Q8TBP0 767 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 GLIS2Q9BZE0 524 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-210ENST00000474684 KCNQ5Q9NR82 932 aa7.63□□□□□ -1.19
CPSF7-210ENST00000474684 CWC25Q9NXE8 425 aaPredicted RBP7.63□□□□□ -1.19
CPSF7-210ENST00000474684 NSFL1CQ9UNZ2 370 aaKnown RBP7.63□□□□□ -1.19
CPSF7-210ENST00000474684 ZNF609O15014 1411 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 PAPPA2Q9BXP8 1791 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 ASTN2O75129 1339 aaPredicted RBP7.62□□□□□ -1.19
CPSF7-210ENST00000474684 RASSF10A6NK89 507 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 NEURL1BA8MQ27 555 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 ECE2O60344 883 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 UFL1O94874 794 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 CTSWP56202 376 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 CCDC30Q5VVM6 783 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 KSR2Q6VAB6 950 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 MICALL2Q8IY33 904 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 CCDC191Q8NCU4 936 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 ADARB2Q9NS39 739 aaKnown RBP7.62□□□□□ -1.19
CPSF7-210ENST00000474684 PLA2G2EQ9NZK7 142 aa7.62□□□□□ -1.19
CPSF7-210ENST00000474684 IL16Q14005 1332 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 C6orf229H3BNL8 230 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 PDE8AO60658 829 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 KLRK1P26718 216 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 PBX2P40425 430 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 RPS8P62241 208 aaKnown RBP7.61□□□□□ -1.19
CPSF7-210ENST00000474684 LSM11P83369 360 aaKnown RBP eCLIP7.61□□□□□ -1.19
CPSF7-210ENST00000474684 EXOSC9Q06265 439 aaKnown RBP7.61□□□□□ -1.19
CPSF7-210ENST00000474684 FLIIQ13045 1269 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 FAM161AQ3B820 660 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 CST9Q5W186 159 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 USP50Q70EL3 339 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-210ENST00000474684 SAMD7Q7Z3H4 446 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 UBE3BQ7Z3V4 1068 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 BCL2L13Q9BXK5 485 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 TMX4Q9H1E5 349 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-210ENST00000474684 VPS33BQ9H267 617 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 GREM2Q9H772 168 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 HCSTQ9UBK5 93 aa7.61□□□□□ -1.19
CPSF7-210ENST00000474684 ABT1Q9ULW3 272 aaKnown RBP7.61□□□□□ -1.19
CPSF7-210ENST00000474684 ANP32CO43423 234 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 DDX58O95786 925 aaKnown RBP7.6□□□□□ -1.19
CPSF7-210ENST00000474684 CASP7P55210 303 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 GRM1Q13255 1194 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 WASHC4Q2M389 1173 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 CCDC152Q4G0S7 254 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 TBC1D10BQ4KMP7 808 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-210ENST00000474684 CYP4F22Q6NT55 531 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 TTLL11Q8NHH1 800 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 STK31Q9BXU1 1019 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 PODXL2Q9NZ53 605 aa7.6□□□□□ -1.19
CPSF7-210ENST00000474684 CNOT7Q9UIV1 285 aaKnown RBP7.6□□□□□ -1.19
CPSF7-210ENST00000474684 MED23Q9ULK4 1368 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 XDHP47989 1333 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 ZNF521Q96K83 1311 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 WDR33Q9C0J8 1336 aaKnown RBP7.59□□□□□ -1.19
CPSF7-210ENST00000474684 ADM5C9JUS6 153 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 F6X3S4 739 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 VAMP4O75379 141 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 CELF2O95319 508 aaKnown RBP7.59□□□□□ -1.19
CPSF7-210ENST00000474684 ZEB1P37275 1124 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-210ENST00000474684 VASPP50552 380 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-210ENST00000474684 FKBP5Q13451 457 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-210ENST00000474684 DEFB115Q30KQ5 88 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 PAXIP1Q6ZW49 1069 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-210ENST00000474684 FAM9BQ8IZU0 186 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 TNS4Q8IZW8 715 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 CAPNS2Q96L46 248 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 ZNF408Q9H9D4 720 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 ANKIB1Q9P2G1 1089 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 GGA1Q9UJY5 639 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 TLL2Q9Y6L7 1015 aa7.59□□□□□ -1.19
CPSF7-210ENST00000474684 H7C1W4 665 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 SNAP23O00161 211 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 AOC2O75106 756 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 HSPA8P11142 646 aaKnown RBP7.58□□□□□ -1.2
CPSF7-210ENST00000474684 GCKRQ14397 625 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 TNIP1Q15025 636 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 KIF4BQ2VIQ3 1234 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 RBM26Q5T8P6 1007 aaKnown RBP7.58□□□□□ -1.2
CPSF7-210ENST00000474684 TXNRD3Q86VQ6 643 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 ANKRD18AQ8IVF6 992 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms