RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 MPNDQ8N594 471 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 TBC1D16Q8TBP0 767 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 CCDC8Q9H0W5 538 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-206ENST00000474648 ANKIB1Q9P2G1 1089 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 NSFL1CQ9UNZ2 370 aaKnown RBP12.33□□□□□ -0.44
COL8A1-206ENST00000474648 AKAP2Q9Y2D5 859 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 LEMD3Q9Y2U8 911 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 XDHP47989 1333 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 IRS2Q9Y4H2 1338 aa12.33□□□□□ -0.44
COL8A1-206ENST00000474648 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 A0A1B0GUL7 405 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 ATP2B4P23634 1241 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 ADORA1P30542 326 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
COL8A1-206ENST00000474648 ATP2B3Q16720 1220 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 AACSQ86V21 672 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 LPIN2Q92539 896 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 RTFDC1Q9BY42 306 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-206ENST00000474648 TLR7Q9NYK1 1049 aaKnown RBP12.32□□□□□ -0.44
COL8A1-206ENST00000474648 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 SALL3Q9BXA9 1300 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 SLX4Q8IY92 1834 aa12.32□□□□□ -0.44
COL8A1-206ENST00000474648 KLRK1P26718 216 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 DPP8Q6V1X1 898 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-206ENST00000474648 C15orf52Q6ZUT6 534 aaKnown RBP12.31□□□□□ -0.44
COL8A1-206ENST00000474648 TXNRD3Q86VQ6 643 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 XAGE2Q96GT9 111 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 NEUROD6Q96NK8 337 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 GPR101Q96P66 508 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-206ENST00000474648 DBNDD2Q9BQY9 259 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
COL8A1-206ENST00000474648 DBNLQ9UJU6 430 aaKnown RBP12.31□□□□□ -0.44
COL8A1-206ENST00000474648 GGA1Q9UJY5 639 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
COL8A1-206ENST00000474648 UFL1O94874 794 aa12.3□□□□□ -0.44
COL8A1-206ENST00000474648 GRIPAP1Q4V328 841 aa12.3□□□□□ -0.44
COL8A1-206ENST00000474648 CCDC93Q567U6 631 aa12.3□□□□□ -0.44
COL8A1-206ENST00000474648 PLEKHM2Q8IWE5 1019 aa12.3□□□□□ -0.44
COL8A1-206ENST00000474648 RTKN2Q8IZC4 609 aa12.3□□□□□ -0.44
COL8A1-206ENST00000474648 FAM84BQ96KN1 310 aaPredicted RBP12.3□□□□□ -0.44
COL8A1-206ENST00000474648 STAP2Q9UGK3 403 aa12.3□□□□□ -0.44
COL8A1-206ENST00000474648 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
COL8A1-206ENST00000474648 ZNF609O15014 1411 aa12.29□□□□□ -0.44
COL8A1-206ENST00000474648 C6orf229H3BNL8 230 aa12.29□□□□□ -0.44
COL8A1-206ENST00000474648 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
COL8A1-206ENST00000474648 IFIT1P09914 478 aaKnown RBP12.29□□□□□ -0.44
COL8A1-206ENST00000474648 SLC5A1P13866 664 aa12.29□□□□□ -0.44
COL8A1-206ENST00000474648 KCNJ4P48050 445 aa12.29□□□□□ -0.44
COL8A1-206ENST00000474648 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-206ENST00000474648 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
COL8A1-206ENST00000474648 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
COL8A1-206ENST00000474648 PSMD1Q99460 953 aa12.29□□□□□ -0.44
COL8A1-206ENST00000474648 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
COL8A1-206ENST00000474648 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
COL8A1-206ENST00000474648 YBX3P16989 372 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL8A1-206ENST00000474648 GYG1P46976 350 aa12.28□□□□□ -0.44
COL8A1-206ENST00000474648 BCAMP50895 628 aa12.28□□□□□ -0.44
COL8A1-206ENST00000474648 PDE1AP54750 535 aa12.28□□□□□ -0.44
COL8A1-206ENST00000474648 FKBP4Q02790 459 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL8A1-206ENST00000474648 NFKBIEO00221 500 aa12.27□□□□□ -0.45
COL8A1-206ENST00000474648 MX1P20591 662 aa12.27□□□□□ -0.45
COL8A1-206ENST00000474648 PHKA1P46020 1223 aa12.27□□□□□ -0.45
COL8A1-206ENST00000474648 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
COL8A1-206ENST00000474648 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
COL8A1-206ENST00000474648 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.45
COL8A1-206ENST00000474648 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 RIMBP2O15034 1052 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 ATP5JP18859 108 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 HIBADHP31937 336 aaKnown RBP12.26□□□□□ -0.45
COL8A1-206ENST00000474648 PRELPP51888 382 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 PI4K2BQ8TCG2 481 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 ZNF512BQ96KM6 892 aaPredicted RBP12.26□□□□□ -0.45
COL8A1-206ENST00000474648 EYA3Q99504 573 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 ZC3H12CQ9C0D7 883 aaKnown RBP12.26□□□□□ -0.45
COL8A1-206ENST00000474648 MED23Q9ULK4 1368 aa12.26□□□□□ -0.45
COL8A1-206ENST00000474648 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
COL8A1-206ENST00000474648 RGS3P49796 1198 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 KIAA2012Q0VF49 1180 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 SCARF1Q14162 830 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 GORABQ5T7V8 394 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 ARHGAP27Q6ZUM4 889 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 TDRD7Q8NHU6 1098 aaKnown RBP12.25□□□□□ -0.45
COL8A1-206ENST00000474648 VPS33BQ9H267 617 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 CD209Q9NNX6 404 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 ZNF277Q9NRM2 450 aaPredicted RBP12.25□□□□□ -0.45
COL8A1-206ENST00000474648 TTC41PQ6P2S7 1318 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 LTBP3Q9NS15 1303 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 LTBP1Q14766 1721 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 SPEF2Q9C093 1822 aa12.25□□□□□ -0.45
COL8A1-206ENST00000474648 UQCRFS1P1P0C7P4 283 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms