RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	CWC25	Q9NXE8	425 aa	Predicted RBP	12.59	□□□□□ -0.39
PPP2R1A-208	ENST00000473820	ANKIB1	Q9P2G1	1089 aa		12.59	□□□□□ -0.39
PPP2R1A-208	ENST00000473820	TBC1D8	O95759	1140 aa		12.58	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	RPS8	P62241	208 aa	Known RBP	12.58	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	SF3B3	Q15393	1217 aa	Known RBP	12.58	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	CWF19L2	Q2TBE0	894 aa	Known RBP	12.58	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	CCDC191	Q8NCU4	936 aa		12.58	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	TAF1	P21675	1872 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820		F6X3S4	739 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	IGKV5-2	P06315	115 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	VIL1	P09327	827 aa	Known RBP	12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	FKBP1B	P68106	108 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	RASAL3	Q86YV0	1011 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	MRPL50	Q8N5N7	158 aa	Known RBP	12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	DNAAF4	Q8WXU2	420 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	SSH1	Q8WYL5	1049 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	TSHZ2	Q9NRE2	1034 aa		12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	ASTN2	O75129	1339 aa	Predicted RBP	12.57	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	ANKRD36C	Q5JPF3	1778 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	UBE2Q2L	H0YL09	131 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	IRS4	O14654	1257 aa	Predicted RBP	12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	UFL1	O94874	794 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	IRX6	P78412	446 aa	Predicted RBP	12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	SLC4A10	Q6U841	1118 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	AGBL3	Q8NEM8	1001 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	GCC1	Q96CN9	775 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	CCDC136	Q96JN2	1154 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	GGA1	Q9UJY5	639 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	RTL9	Q8NET4	1388 aa		12.56	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	NEURL1B	A8MQ27	555 aa		12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	PCCA	P05165	728 aa	Predicted RBP	12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	USP17L8	P0C7I0	530 aa		12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	HSP90B1	P14625	803 aa	Known RBP	12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	MKRN3	Q13064	507 aa	Known RBP	12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	LINS1	Q8NG48	757 aa		12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	MYOZ2	Q9NPC6	264 aa		12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	SMC4	Q9NTJ3	1288 aa		12.55	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	LAMB2	P55268	1798 aa		12.54	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	CT47B1	P0C2W7	299 aa	Predicted RBP	12.54	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	NF2	P35240	595 aa		12.54	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	ALDH1L2	Q3SY69	923 aa		12.54	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	MOB2	Q70IA6	237 aa		12.54	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	SCAF8	Q9UPN6	1271 aa	Known RBP	12.54	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	GPR25	O00155	361 aa		12.53	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	ZNF280A	P59817	542 aa	Predicted RBP	12.53	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	GCKR	Q14397	625 aa		12.53	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	PRAMEF18	Q5VWM3	479 aa		12.53	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.53	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	UBE3B	Q7Z3V4	1068 aa		12.53	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.53	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	DUOX1	Q9NRD9	1551 aa		12.52	□□□□□ -0.4
PPP2R1A-208	ENST00000473820	USP17L3	A6NCW0	530 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	USP17L4	A6NCW7	530 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	TM4SF4	P48230	202 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	SREBF2	Q12772	1141 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	AAMP	Q13685	434 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	BEND3	Q5T5X7	828 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	USP17L1	Q7RTZ2	530 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	OGFOD1	Q8N543	542 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	FBXW7	Q969H0	707 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	SEC31B	Q9NQW1	1179 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PODXL2	Q9NZ53	605 aa		12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.52	□□□□□ -0.41
PPP2R1A-208	ENST00000473820		H7C1W4	665 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PDE8A	O60658	829 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	FKTN	O75072	461 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	RARS	P54136	660 aa	Known RBP	12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PRKG1	Q13976	671 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	CCDC152	Q4G0S7	254 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PODN	Q7Z5L7	613 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	SRCIN1	Q9C0H9	1055 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	NOB1	Q9ULX3	412 aa	Known RBP	12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PTPRC	P08575	1304 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PITPNM2	Q9BZ72	1349 aa		12.51	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	NBPF9	Q3BBW0	867 aa		12.5	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	ARMC9	Q7Z3E5	817 aa		12.5	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.5	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	XDH	P47989	1333 aa		12.49	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	ATP2B4	P23634	1241 aa		12.49	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	B4GALNT3	Q6L9W6	998 aa		12.49	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	ANKRD18A	Q8IVF6	992 aa		12.49	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	LRRC37A	A6NMS7	1700 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	GRM8	O00222	908 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	BCAR3	O75815	825 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	ALDH1L1	O75891	902 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	ALDH1A1	P00352	501 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	CTSW	P56202	376 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	NOM1	Q5C9Z4	860 aa	Known RBP	12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	TTLL11	Q8NHH1	800 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	FRAT1	Q92837	279 aa	Predicted RBP	12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	TRIM17	Q9Y577	477 aa		12.48	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PTPN12	Q05209	780 aa	Known RBP	12.47	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PDE3A	Q14432	1141 aa		12.47	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	HABP4	Q5JVS0	413 aa	Known RBP	12.47	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	INTS3	Q68E01	1043 aa	Known RBP	12.47	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	GML	Q99445	158 aa		12.47	□□□□□ -0.41
PPP2R1A-208	ENST00000473820	PAPPA2	Q9BXP8	1791 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms