RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ACPPP15309 386 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 CES1P23141 567 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 SERPINB4P48594 390 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 ARHGAP4P98171 946 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 EHHADHQ08426 723 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 NCAPG2Q86XI2 1143 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 DZIP1LQ8IYY4 767 aaKnown RBP6.34□□□□□ -1.39
COPS3-206ENST00000471414 DCAF11Q8TEB1 546 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 SNX29Q8TEQ0 813 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 PMEPA1Q969W9 287 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 MRPL18Q9H0U6 180 aaKnown RBP6.34□□□□□ -1.39
COPS3-206ENST00000471414 ANO2Q9NQ90 1003 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 USP21Q9UK80 565 aa6.34□□□□□ -1.39
COPS3-206ENST00000471414 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
COPS3-206ENST00000471414 EREGO14944 169 aa6.33□□□□□ -1.4
COPS3-206ENST00000471414 EPHA1P21709 976 aa6.33□□□□□ -1.4
COPS3-206ENST00000471414 CDC27P30260 824 aa6.33□□□□□ -1.4
COPS3-206ENST00000471414 C8orf34Q49A92 452 aa6.33□□□□□ -1.4
COPS3-206ENST00000471414 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
COPS3-206ENST00000471414 MEGF10Q96KG7 1140 aa6.33□□□□□ -1.4
COPS3-206ENST00000471414 FOXD3Q9UJU5 478 aaPredicted RBP6.33□□□□□ -1.4
COPS3-206ENST00000471414 LINC01387J3KSC0 135 aa6.32□□□□□ -1.4
COPS3-206ENST00000471414 ABL1P00519 1130 aa6.32□□□□□ -1.4
COPS3-206ENST00000471414 IGHA2P01877 340 aa6.32□□□□□ -1.4
COPS3-206ENST00000471414 IREB2P48200 963 aaKnown RBP6.32□□□□□ -1.4
COPS3-206ENST00000471414 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
COPS3-206ENST00000471414 PEAR1Q5VY43 1037 aaPredicted RBP6.32□□□□□ -1.4
COPS3-206ENST00000471414 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
COPS3-206ENST00000471414 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.32□□□□□ -1.4
COPS3-206ENST00000471414 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
COPS3-206ENST00000471414 SOX13Q9UN79 622 aa6.32□□□□□ -1.4
COPS3-206ENST00000471414 H3BRB1 525 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 PTPRAP18433 802 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 WNT8BQ93098 351 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 FAM129BQ96TA1 746 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 ARID3AQ99856 593 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 ZKSCAN3Q9BRR0 538 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 TUT1Q9H6E5 874 aaKnown RBP6.31□□□□□ -1.4
COPS3-206ENST00000471414 AKTIPQ9H8T0 292 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 SH2B1Q9NRF2 756 aaPredicted RBP6.31□□□□□ -1.4
COPS3-206ENST00000471414 KCNK4Q9NYG8 393 aa6.31□□□□□ -1.4
COPS3-206ENST00000471414 PDE2AO00408 941 aaPredicted RBP6.3□□□□□ -1.4
COPS3-206ENST00000471414 FSCN2O14926 492 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 ADAM11O75078 769 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 PHACTR2O75167 634 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 WISP1O95388 367 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 TXNDC11Q6PKC3 985 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 KLHL23Q8NBE8 558 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 TP53INP1Q96A56 240 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 BHLHE41Q9C0J9 482 aaPredicted RBP6.3□□□□□ -1.4
COPS3-206ENST00000471414 ZFYVE28Q9HCC9 887 aa6.3□□□□□ -1.4
COPS3-206ENST00000471414 H3BRJ5 948 aa6.29□□□□□ -1.4
COPS3-206ENST00000471414 TRPA1O75762 1119 aa6.29□□□□□ -1.4
COPS3-206ENST00000471414 EDN3P14138 238 aa6.29□□□□□ -1.4
COPS3-206ENST00000471414 CD68P34810 354 aaPredicted RBP6.29□□□□□ -1.4
COPS3-206ENST00000471414 PDE4CQ08493 712 aa6.29□□□□□ -1.4
COPS3-206ENST00000471414 PRSS36Q5K4E3 855 aa6.29□□□□□ -1.4
COPS3-206ENST00000471414 VN1R5Q7Z5H4 357 aa6.29□□□□□ -1.4
COPS3-206ENST00000471414 TTC16Q8NEE8 873 aa6.29□□□□□ -1.4
COPS3-206ENST00000471414 FOXD4L4Q8WXT5 416 aaPredicted RBP6.29□□□□□ -1.4
COPS3-206ENST00000471414 ALX3O95076 343 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 PIP4K2BP78356 416 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 AAMPQ13685 434 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 KIAA1211Q6ZU35 1233 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 GLYCTKQ8IVS8 523 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 OSMRQ99650 979 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 CARD10Q9BWT7 1032 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 OSGEPQ9NPF4 335 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 LATS2Q9NRM7 1088 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 GNEQ9Y223 722 aaKnown RBP6.28□□□□□ -1.4
COPS3-206ENST00000471414 AMOTL2Q9Y2J4 779 aa6.28□□□□□ -1.4
COPS3-206ENST00000471414 XP32Q5T750 250 aa6.27□□□□□ -1.41
COPS3-206ENST00000471414 PRR23CQ6ZRP0 262 aa6.27□□□□□ -1.41
COPS3-206ENST00000471414 Q8N3U1 123 aa6.27□□□□□ -1.41
COPS3-206ENST00000471414 BSNDQ8WZ55 320 aa6.27□□□□□ -1.41
COPS3-206ENST00000471414 KLHDC7BQ96G42 594 aa6.27□□□□□ -1.41
COPS3-206ENST00000471414 CITED4Q96RK1 184 aa6.27□□□□□ -1.41
COPS3-206ENST00000471414 SEC31BQ9NQW1 1179 aa6.27□□□□□ -1.41
COPS3-206ENST00000471414 GALNT12Q8IXK2 581 aa6.26□□□□□ -1.41
COPS3-206ENST00000471414 AGGF1Q8N302 714 aaeCLIP6.26□□□□□ -1.41
COPS3-206ENST00000471414 UBL7Q96S82 380 aaPredicted RBP6.26□□□□□ -1.41
COPS3-206ENST00000471414 BRPF3Q9ULD4 1205 aa6.26□□□□□ -1.41
COPS3-206ENST00000471414 DDX3YO15523 660 aaKnown RBP6.25□□□□□ -1.41
COPS3-206ENST00000471414 FAM117BQ6P1L5 589 aa6.25□□□□□ -1.41
COPS3-206ENST00000471414 FAM46AQ96IP4 442 aaKnown RBP6.25□□□□□ -1.41
COPS3-206ENST00000471414 TCF12Q99081 682 aa6.25□□□□□ -1.41
COPS3-206ENST00000471414 SOX17Q9H6I2 414 aaPredicted RBP6.25□□□□□ -1.41
COPS3-206ENST00000471414 SOWAHDA6NJG2 315 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 SOX1O00570 391 aaPredicted RBP6.24□□□□□ -1.41
COPS3-206ENST00000471414 GPR182O15218 404 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 NDUFB5O43674 189 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 BRD1O95696 1058 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 CDC25BP30305 580 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 CABP4P57796 275 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 ZMYM1Q5SVZ6 1142 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 HGSNATQ68CP4 663 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 ACAD11Q709F0 780 aa6.24□□□□□ -1.41
COPS3-206ENST00000471414 CCNJLQ8IV13 435 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms