RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LINC01387J3KSC0 135 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 FAM13AO94988 1023 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 CES1P23141 567 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 CDC27P30260 824 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 PRSS36Q5K4E3 855 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 Q8N3U1 123 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 AKTIPQ9H8T0 292 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 SALL4Q9UJQ4 1053 aa9.06□□□□□ -0.96
LSM5-209ENST00000468872 SF3B2Q13435 895 aaKnown RBP9.05□□□□□ -0.96
LSM5-209ENST00000468872 AAMPQ13685 434 aa9.05□□□□□ -0.96
LSM5-209ENST00000468872 TMEM130Q8N3G9 435 aa9.05□□□□□ -0.96
LSM5-209ENST00000468872 MEGF10Q96KG7 1140 aa9.05□□□□□ -0.96
LSM5-209ENST00000468872 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
LSM5-209ENST00000468872 ABL1P00519 1130 aa9.04□□□□□ -0.96
LSM5-209ENST00000468872 FKBP4Q02790 459 aaKnown RBP eCLIP9.04□□□□□ -0.96
LSM5-209ENST00000468872 ZMYM1Q5SVZ6 1142 aa9.04□□□□□ -0.96
LSM5-209ENST00000468872 XP32Q5T750 250 aa9.04□□□□□ -0.96
LSM5-209ENST00000468872 TXNDC11Q6PKC3 985 aa9.04□□□□□ -0.96
LSM5-209ENST00000468872 GALNT11Q8NCW6 608 aa9.04□□□□□ -0.96
LSM5-209ENST00000468872 POP1Q99575 1024 aaKnown RBP9.04□□□□□ -0.96
LSM5-209ENST00000468872 CHRDQ9H2X0 955 aa9.04□□□□□ -0.96
LSM5-209ENST00000468872 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
LSM5-209ENST00000468872 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
LSM5-209ENST00000468872 CCDC9Q9Y3X0 531 aaKnown RBP9.04□□□□□ -0.96
LSM5-209ENST00000468872 ALX3O95076 343 aa9.03□□□□□ -0.96
LSM5-209ENST00000468872 ACPPP15309 386 aa9.03□□□□□ -0.96
LSM5-209ENST00000468872 PTPRAP18433 802 aa9.03□□□□□ -0.96
LSM5-209ENST00000468872 CDC25BP30305 580 aa9.03□□□□□ -0.96
LSM5-209ENST00000468872 ZNF211Q13398 564 aaPredicted RBP9.03□□□□□ -0.96
LSM5-209ENST00000468872 TXNDC2Q86VQ3 553 aa9.03□□□□□ -0.96
LSM5-209ENST00000468872 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
LSM5-209ENST00000468872 FZD6O60353 706 aa9.02□□□□□ -0.97
LSM5-209ENST00000468872 EPHA1P21709 976 aa9.02□□□□□ -0.97
LSM5-209ENST00000468872 FOXD4L6Q3SYB3 417 aaPredicted RBP9.02□□□□□ -0.97
LSM5-209ENST00000468872 TMCO4Q5TGY1 634 aa9.02□□□□□ -0.97
LSM5-209ENST00000468872 FOXD4L3Q6VB84 417 aaPredicted RBP9.02□□□□□ -0.97
LSM5-209ENST00000468872 DZIP1LQ8IYY4 767 aaKnown RBP9.02□□□□□ -0.97
LSM5-209ENST00000468872 PMEPA1Q969W9 287 aa9.02□□□□□ -0.97
LSM5-209ENST00000468872 ADAM19Q9H013 955 aa9.02□□□□□ -0.97
LSM5-209ENST00000468872 NFKBIEO00221 500 aa9.01□□□□□ -0.97
LSM5-209ENST00000468872 TM4SF5O14894 197 aa9.01□□□□□ -0.97
LSM5-209ENST00000468872 TNFRSF21O75509 655 aa9.01□□□□□ -0.97
LSM5-209ENST00000468872 CD68P34810 354 aaPredicted RBP9.01□□□□□ -0.97
LSM5-209ENST00000468872 USP5P45974 858 aa9.01□□□□□ -0.97
LSM5-209ENST00000468872 CARD10Q9BWT7 1032 aa9.01□□□□□ -0.97
LSM5-209ENST00000468872 DZANK1Q9NVP4 752 aa9.01□□□□□ -0.97
LSM5-209ENST00000468872 FAM177BA6PVY3 158 aa9□□□□□ -0.97
LSM5-209ENST00000468872 FSCN2O14926 492 aa9□□□□□ -0.97
LSM5-209ENST00000468872 EHHADHQ08426 723 aa9□□□□□ -0.97
LSM5-209ENST00000468872 FAM117BQ6P1L5 589 aa9□□□□□ -0.97
LSM5-209ENST00000468872 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
LSM5-209ENST00000468872 AGGF1Q8N302 714 aaeCLIP9□□□□□ -0.97
LSM5-209ENST00000468872 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
LSM5-209ENST00000468872 KCNK4Q9NYG8 393 aa9□□□□□ -0.97
LSM5-209ENST00000468872 PDE2AO00408 941 aaPredicted RBP8.99□□□□□ -0.97
LSM5-209ENST00000468872 EREGO14944 169 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 PHACTR2O75167 634 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 TRPA1O75762 1119 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 WISP1O95388 367 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 Q6ZS46 218 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 GJD3Q8N144 294 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 CCER1Q8TC90 406 aaPredicted RBP8.99□□□□□ -0.97
LSM5-209ENST00000468872 SNX29Q8TEQ0 813 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 HHIPQ96QV1 700 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
LSM5-209ENST00000468872 FOXD3Q9UJU5 478 aaPredicted RBP8.99□□□□□ -0.97
LSM5-209ENST00000468872 KLHL23Q8NBE8 558 aa8.98□□□□□ -0.97
LSM5-209ENST00000468872 H3BRJ5 948 aa8.97□□□□□ -0.97
LSM5-209ENST00000468872 ICMTO60725 284 aa8.97□□□□□ -0.97
LSM5-209ENST00000468872 MFAP1P55081 439 aaKnown RBP8.97□□□□□ -0.97
LSM5-209ENST00000468872 CABP4P57796 275 aa8.97□□□□□ -0.97
LSM5-209ENST00000468872 PRR23CQ6ZRP0 262 aa8.97□□□□□ -0.97
LSM5-209ENST00000468872 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.97
LSM5-209ENST00000468872 TMEM102Q8N9M5 508 aaPredicted RBP8.97□□□□□ -0.97
LSM5-209ENST00000468872 OSMRQ99650 979 aa8.97□□□□□ -0.97
LSM5-209ENST00000468872 ZKSCAN3Q9BRR0 538 aa8.97□□□□□ -0.97
LSM5-209ENST00000468872 GLB1P16278 677 aa8.96□□□□□ -0.98
LSM5-209ENST00000468872 SERPINB4P48594 390 aa8.96□□□□□ -0.98
LSM5-209ENST00000468872 ACAD11Q709F0 780 aa8.96□□□□□ -0.98
LSM5-209ENST00000468872 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.98
LSM5-209ENST00000468872 H3BRB1 525 aa8.95□□□□□ -0.98
LSM5-209ENST00000468872 DDX3YO15523 660 aaKnown RBP8.95□□□□□ -0.98
LSM5-209ENST00000468872 ADAM11O75078 769 aa8.95□□□□□ -0.98
LSM5-209ENST00000468872 EDN3P14138 238 aa8.95□□□□□ -0.98
LSM5-209ENST00000468872 PIP4K2BP78356 416 aa8.95□□□□□ -0.98
LSM5-209ENST00000468872 KLHDC7BQ96G42 594 aa8.95□□□□□ -0.98
LSM5-209ENST00000468872 TUT1Q9H6E5 874 aaKnown RBP8.95□□□□□ -0.98
LSM5-209ENST00000468872 SOX13Q9UN79 622 aa8.95□□□□□ -0.98
LSM5-209ENST00000468872 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
LSM5-209ENST00000468872 ECM1Q16610 540 aa8.94□□□□□ -0.98
LSM5-209ENST00000468872 DUOXA2Q1HG44 320 aa8.94□□□□□ -0.98
LSM5-209ENST00000468872 KIAA1211Q6ZU35 1233 aa8.94□□□□□ -0.98
LSM5-209ENST00000468872 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
LSM5-209ENST00000468872 WNT8BQ93098 351 aa8.94□□□□□ -0.98
LSM5-209ENST00000468872 NXPE3Q969Y0 559 aa8.94□□□□□ -0.98
LSM5-209ENST00000468872 GLYCTKQ8IVS8 523 aa8.93□□□□□ -0.98
LSM5-209ENST00000468872 UBASH3BQ8TF42 649 aa8.93□□□□□ -0.98
LSM5-209ENST00000468872 BSNDQ8WZ55 320 aa8.93□□□□□ -0.98
LSM5-209ENST00000468872 UBL7Q96S82 380 aaPredicted RBP8.93□□□□□ -0.98
LSM5-209ENST00000468872 ZFYVE28Q9HCC9 887 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms