RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 UQCRFS1P1P0C7P4 283 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 ZNF804AQ7Z570 1209 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 VPS37DQ86XT2 251 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 TBC1D16Q8TBP0 767 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.76□□□□□ -1.01
NXF3-204ENST00000468528 NEUROD6Q96NK8 337 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 ECHDC1Q9NTX5 307 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 ZNF609O15014 1411 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 LRRC37AA6NMS7 1700 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 LTBP3Q9NS15 1303 aa8.76□□□□□ -1.01
NXF3-204ENST00000468528 C6orf229H3BNL8 230 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 C21orf2O43822 256 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 TAF5LO75529 589 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 UFL1O94874 794 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 ATP5JP18859 108 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 PDE1AP54750 535 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 TIMM10P62072 90 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 GPSM2P81274 684 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 TMED8Q6PL24 325 aaPredicted RBP8.75□□□□□ -1.01
NXF3-204ENST00000468528 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
NXF3-204ENST00000468528 XAGE2Q96GT9 111 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 ZC3H12CQ9C0D7 883 aaKnown RBP8.75□□□□□ -1.01
NXF3-204ENST00000468528 DBNLQ9UJU6 430 aaKnown RBP8.75□□□□□ -1.01
NXF3-204ENST00000468528 BCS1LQ9Y276 419 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 PDS5AQ29RF7 1337 aaKnown RBP8.75□□□□□ -1.01
NXF3-204ENST00000468528 SALL3Q9BXA9 1300 aa8.75□□□□□ -1.01
NXF3-204ENST00000468528 SMARCA5O60264 1052 aaPredicted RBP8.74□□□□□ -1.01
NXF3-204ENST00000468528 HIBADHP31937 336 aaKnown RBP8.74□□□□□ -1.01
NXF3-204ENST00000468528 FKBP4Q02790 459 aaKnown RBP eCLIP8.74□□□□□ -1.01
NXF3-204ENST00000468528 WASHC4Q2M389 1173 aa8.74□□□□□ -1.01
NXF3-204ENST00000468528 LRRFIP1Q32MZ4 808 aaKnown RBP8.74□□□□□ -1.01
NXF3-204ENST00000468528 PODNQ7Z5L7 613 aa8.74□□□□□ -1.01
NXF3-204ENST00000468528 FBXO33Q7Z6M2 555 aa8.74□□□□□ -1.01
NXF3-204ENST00000468528 PLEKHM2Q8IWE5 1019 aa8.74□□□□□ -1.01
NXF3-204ENST00000468528 PELP1Q8IZL8 1130 aaKnown RBP8.74□□□□□ -1.01
NXF3-204ENST00000468528 NLGN2Q8NFZ4 835 aa8.74□□□□□ -1.01
NXF3-204ENST00000468528 DBNDD2Q9BQY9 259 aa8.74□□□□□ -1.01
NXF3-204ENST00000468528 CCDC8Q9H0W5 538 aaPredicted RBP8.74□□□□□ -1.01
NXF3-204ENST00000468528 KIAA1551Q9HCM1 1747 aa8.74□□□□□ -1.01
NXF3-204ENST00000468528 SNED1Q8TER0 1413 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 GRIN3BO60391 1043 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 EIF5BO60841 1220 aaKnown RBP8.73□□□□□ -1.01
NXF3-204ENST00000468528 ARID4AP29374 1257 aaPredicted RBP8.73□□□□□ -1.01
NXF3-204ENST00000468528 KIAA2012Q0VF49 1180 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 TTF1Q15361 905 aaPredicted RBP8.73□□□□□ -1.01
NXF3-204ENST00000468528 BMP2KLQ5H9B9 411 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 TTC39AQ5SRH9 613 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 CCDC102BQ68D86 513 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 FAM84BQ96KN1 310 aaPredicted RBP8.73□□□□□ -1.01
NXF3-204ENST00000468528 COA1Q9GZY4 146 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 TAOK3Q9H2K8 898 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 POLLQ9UGP5 575 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 DENND2AQ9ULE3 1009 aa8.73□□□□□ -1.01
NXF3-204ENST00000468528 COL4A1P02462 1669 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 G3V3G9 751 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 FRAT2O75474 233 aaPredicted RBP8.72□□□□□ -1.01
NXF3-204ENST00000468528 IL1R1P14778 569 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 PDE4AP27815 886 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 C16orf71Q8IYS4 520 aaPredicted RBP8.72□□□□□ -1.01
NXF3-204ENST00000468528 ZGPATQ8N5A5 531 aaKnown RBP8.72□□□□□ -1.01
NXF3-204ENST00000468528 PI4K2BQ8TCG2 481 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
NXF3-204ENST00000468528 SLX4Q8IY92 1834 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 IRS2Q9Y4H2 1338 aa8.72□□□□□ -1.01
NXF3-204ENST00000468528 BRCA1P38398 1863 aaKnown RBP8.72□□□□□ -1.01
NXF3-204ENST00000468528 LTBP1Q14766 1721 aa8.71□□□□□ -1.01
NXF3-204ENST00000468528 DCAF8L1A6NGE4 600 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 ADORA1P30542 326 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 PHKA1P46020 1223 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 RGS3P49796 1198 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 BCAMP50895 628 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 TTC22Q5TAA0 569 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 CNTROBQ8N137 903 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 TDRD7Q8NHU6 1098 aaKnown RBP8.71□□□□□ -1.02
NXF3-204ENST00000468528 WDR66Q8TBY9 1149 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 TBC1D22AQ8WUA7 517 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 JDP2Q8WYK2 163 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 EVI5LQ96CN4 794 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 HAUS7Q99871 368 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 BCL11AQ9H165 835 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 CD209Q9NNX6 404 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 TLR7Q9NYK1 1049 aaKnown RBP8.71□□□□□ -1.02
NXF3-204ENST00000468528 SUGT1Q9Y2Z0 365 aa8.71□□□□□ -1.02
NXF3-204ENST00000468528 TAF1P21675 1872 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 DUOX1Q9NRD9 1551 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 HIP1O00291 1037 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 PPIP5K2O43314 1243 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 IARSP41252 1262 aaKnown RBP8.7□□□□□ -1.02
NXF3-204ENST00000468528 GYG1P46976 350 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 MMP14P50281 582 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
NXF3-204ENST00000468528 SPTY2D1Q68D10 685 aaPredicted RBP8.7□□□□□ -1.02
NXF3-204ENST00000468528 LARGE2Q8N3Y3 721 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 SPATA5Q8NB90 893 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 OTUD7AQ8TE49 926 aaPredicted RBP8.7□□□□□ -1.02
NXF3-204ENST00000468528 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.7□□□□□ -1.02
NXF3-204ENST00000468528 PAG1Q9NWQ8 432 aa8.7□□□□□ -1.02
NXF3-204ENST00000468528 ZNF219Q9P2Y4 722 aaPredicted RBP8.7□□□□□ -1.02
NXF3-204ENST00000468528 ARAP2Q8WZ64 1704 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms