RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PSMD14O00487 310 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 PDE8BO95263 885 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 POLA2Q14181 598 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 TNIP1Q15025 636 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 C15orf52Q6ZUT6 534 aaKnown RBP15.39■□□□□ 0.05
CHPF2-202ENST00000465601 L3MBTL3Q96JM7 780 aaPredicted RBP15.39■□□□□ 0.05
CHPF2-202ENST00000465601 COA1Q9GZY4 146 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 CEP126Q9P2H0 1117 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 IRS2Q9Y4H2 1338 aa15.39■□□□□ 0.05
CHPF2-202ENST00000465601 IL15P40933 162 aaPredicted RBP15.38■□□□□ 0.05
CHPF2-202ENST00000465601 PODNQ7Z5L7 613 aa15.38■□□□□ 0.05
CHPF2-202ENST00000465601 SSH3Q8TE77 659 aa15.38■□□□□ 0.05
CHPF2-202ENST00000465601 CHMP4BQ9H444 224 aaKnown RBP15.38■□□□□ 0.05
CHPF2-202ENST00000465601 GMPSP49915 693 aaPredicted RBP15.37■□□□□ 0.05
CHPF2-202ENST00000465601 G3BP1Q13283 466 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHPF2-202ENST00000465601 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
CHPF2-202ENST00000465601 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
CHPF2-202ENST00000465601 SCN4AP35499 1836 aa15.37■□□□□ 0.05
CHPF2-202ENST00000465601 FGFR2P21802 821 aa15.36■□□□□ 0.05
CHPF2-202ENST00000465601 GYG1P46976 350 aa15.36■□□□□ 0.05
CHPF2-202ENST00000465601 SCNN1DP51172 638 aa15.36■□□□□ 0.05
CHPF2-202ENST00000465601 PUM3Q15397 648 aaKnown RBP15.36■□□□□ 0.05
CHPF2-202ENST00000465601 ZNF804AQ7Z570 1209 aa15.36■□□□□ 0.05
CHPF2-202ENST00000465601 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
CHPF2-202ENST00000465601 FBXW7Q969H0 707 aa15.36■□□□□ 0.05
CHPF2-202ENST00000465601 FAM84BQ96KN1 310 aaPredicted RBP15.36■□□□□ 0.05
CHPF2-202ENST00000465601 HACL1Q9UJ83 578 aa15.36■□□□□ 0.05
CHPF2-202ENST00000465601 PSME4Q14997 1843 aa15.36■□□□□ 0.05
CHPF2-202ENST00000465601 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
CHPF2-202ENST00000465601 USP17L3A6NCW0 530 aa15.35■□□□□ 0.05
CHPF2-202ENST00000465601 USP17L4A6NCW7 530 aa15.35■□□□□ 0.05
CHPF2-202ENST00000465601 SURF6O75683 361 aaKnown RBP15.35■□□□□ 0.05
CHPF2-202ENST00000465601 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
CHPF2-202ENST00000465601 IFIT1P09914 478 aaKnown RBP15.35■□□□□ 0.05
CHPF2-202ENST00000465601 LMOD1P29536 600 aaPredicted RBP15.35■□□□□ 0.05
CHPF2-202ENST00000465601 HIBADHP31937 336 aaKnown RBP15.35■□□□□ 0.05
CHPF2-202ENST00000465601 EPS15P42566 896 aa15.35■□□□□ 0.05
CHPF2-202ENST00000465601 TFCP2Q12800 502 aa15.35■□□□□ 0.05
CHPF2-202ENST00000465601 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
CHPF2-202ENST00000465601 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
CHPF2-202ENST00000465601 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
CHPF2-202ENST00000465601 SLC5A1P13866 664 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 ATP2B3Q16720 1220 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 TTLL5Q6EMB2 1281 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 FBXO33Q7Z6M2 555 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 SIRT2Q8IXJ6 389 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
CHPF2-202ENST00000465601 LPIN2Q92539 896 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 MXD3Q9BW11 206 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 GPRC5DQ9NZD1 345 aa15.34■□□□□ 0.05
CHPF2-202ENST00000465601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
CHPF2-202ENST00000465601 SHTN1A0MZ66 631 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 SASH1O94885 1247 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 IL1R1P14778 569 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 EPHX2P34913 555 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 BCAMP50895 628 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 TIMM10P62072 90 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 GTF2IP78347 998 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 OS9Q13438 667 aaPredicted RBP15.33■□□□□ 0.04
CHPF2-202ENST00000465601 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 RSBN1LQ6PCB5 846 aaPredicted RBP15.33■□□□□ 0.04
CHPF2-202ENST00000465601 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
CHPF2-202ENST00000465601 CNOT7Q9UIV1 285 aaKnown RBP15.33■□□□□ 0.04
CHPF2-202ENST00000465601 NOP58Q9Y2X3 529 aaKnown RBP15.33■□□□□ 0.04
CHPF2-202ENST00000465601 TOMM70O94826 608 aa15.32■□□□□ 0.04
CHPF2-202ENST00000465601 EAPPQ56P03 285 aaPredicted RBP15.32■□□□□ 0.04
CHPF2-202ENST00000465601 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
CHPF2-202ENST00000465601 STRIP1Q5VSL9 837 aa15.32■□□□□ 0.04
CHPF2-202ENST00000465601 TDRD7Q8NHU6 1098 aaKnown RBP15.32■□□□□ 0.04
CHPF2-202ENST00000465601 DPF2Q92785 391 aa15.32■□□□□ 0.04
CHPF2-202ENST00000465601 IQSEC3Q9UPP2 1182 aaPredicted RBP15.32■□□□□ 0.04
CHPF2-202ENST00000465601 JAG2Q9Y219 1238 aa15.32■□□□□ 0.04
CHPF2-202ENST00000465601 H7C1D1 291 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 HMMRO75330 724 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 POTEIP0CG38 1075 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 POTEJP0CG39 1038 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 RPS12P25398 132 aaKnown RBP15.31■□□□□ 0.04
CHPF2-202ENST00000465601 ADORA1P30542 326 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 EXOC6BQ9Y2D4 811 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
CHPF2-202ENST00000465601 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
CHPF2-202ENST00000465601 A0A1B0GUL7 405 aa15.3■□□□□ 0.04
CHPF2-202ENST00000465601 ZNF646O15015 1829 aaPredicted RBP15.3■□□□□ 0.04
CHPF2-202ENST00000465601 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
CHPF2-202ENST00000465601 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
CHPF2-202ENST00000465601 NEUROD6Q96NK8 337 aa15.3■□□□□ 0.04
CHPF2-202ENST00000465601 GMLQ99445 158 aa15.3■□□□□ 0.04
CHPF2-202ENST00000465601 ADARB2Q9NS39 739 aaKnown RBP15.3■□□□□ 0.04
CHPF2-202ENST00000465601 CLEC11AQ9Y240 323 aa15.3■□□□□ 0.04
CHPF2-202ENST00000465601 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
CHPF2-202ENST00000465601 C1QTNF8P60827 252 aa15.29■□□□□ 0.04
CHPF2-202ENST00000465601 RBM26Q5T8P6 1007 aaKnown RBP15.29■□□□□ 0.04
CHPF2-202ENST00000465601 SAMD7Q7Z3H4 446 aa15.29■□□□□ 0.04
CHPF2-202ENST00000465601 PNMA8AQ86V59 439 aaPredicted RBP15.29■□□□□ 0.04
CHPF2-202ENST00000465601 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
CHPF2-202ENST00000465601 FAM205AQ6ZU69 1335 aa15.28■□□□□ 0.04
CHPF2-202ENST00000465601 MYH13Q9UKX3 1938 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms