RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 HMGN5P82970 282 aaKnown RBP10.08□□□□□ -0.8
ACTB-208ENST00000464611 FAM182BQ5T319 152 aa10.08□□□□□ -0.8
ACTB-208ENST00000464611 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
ACTB-208ENST00000464611 UBE3BQ7Z3V4 1068 aa10.08□□□□□ -0.8
ACTB-208ENST00000464611 CCDC83Q8IWF9 413 aa10.08□□□□□ -0.8
ACTB-208ENST00000464611 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
ACTB-208ENST00000464611 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
ACTB-208ENST00000464611 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
ACTB-208ENST00000464611 CFAP45Q9UL16 551 aa10.08□□□□□ -0.8
ACTB-208ENST00000464611 ZKSCAN5Q9Y2L8 839 aa10.08□□□□□ -0.8
ACTB-208ENST00000464611 C5P01031 1676 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 GOLGA6L4A6NEF3 574 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 CCDC192P0DO97 292 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 HMGB2P26583 209 aaKnown RBP10.07□□□□□ -0.8
ACTB-208ENST00000464611 TFCP2Q12800 502 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 ME3Q16798 604 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 HSP90AB3PQ58FF7 597 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 CCDC125Q86Z20 511 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 FAM227BQ96M60 508 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 NAP1L5Q96NT1 182 aaPredicted RBP10.07□□□□□ -0.8
ACTB-208ENST00000464611 PLA2G12BQ9BX93 195 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 SIL1Q9H173 461 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 DDX19AQ9NUU7 478 aaKnown RBP10.07□□□□□ -0.8
ACTB-208ENST00000464611 RBM27Q9P2N5 1060 aaKnown RBP10.07□□□□□ -0.8
ACTB-208ENST00000464611 USP25Q9UHP3 1055 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 DBNLQ9UJU6 430 aaKnown RBP10.07□□□□□ -0.8
ACTB-208ENST00000464611 KCPQ6ZWJ8 1503 aa10.07□□□□□ -0.8
ACTB-208ENST00000464611 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 RREB1Q92766 1687 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 AFDNP55196 1824 aaKnown RBP10.06□□□□□ -0.8
ACTB-208ENST00000464611 A0A0D9SFI3 127 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 GOLGA6L6A8MZA4 724 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 EYA2O00167 538 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 CTAGE5O15320 804 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 TRIM37O94972 964 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 FOXO4P98177 505 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 KIAA2012Q0VF49 1180 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 EPHA10Q5JZY3 1008 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 FOXD4L5Q5VV16 416 aaPredicted RBP10.06□□□□□ -0.8
ACTB-208ENST00000464611 LMBR1LQ6UX01 489 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
ACTB-208ENST00000464611 FOXD4L4Q8WXT5 416 aaPredicted RBP10.06□□□□□ -0.8
ACTB-208ENST00000464611 CEP126Q9P2H0 1117 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
ACTB-208ENST00000464611 TJP1Q07157 1748 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 DHX16O60231 1041 aaKnown RBP10.05□□□□□ -0.8
ACTB-208ENST00000464611 STARD3NLO95772 234 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 PTMAP06454 111 aaKnown RBP10.05□□□□□ -0.8
ACTB-208ENST00000464611 BAG6P46379 1132 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 NAA16Q6N069 864 aaPredicted RBP10.05□□□□□ -0.8
ACTB-208ENST00000464611 ZSCAN25Q6NSZ9 544 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 PIGBQ92521 554 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 ZNF274Q96GC6 653 aaPredicted RBP10.05□□□□□ -0.8
ACTB-208ENST00000464611 AGXT2Q9BYV1 514 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 CNPY2Q9Y2B0 182 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 KAT6BQ8WYB5 2073 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 WDR19Q8NEZ3 1342 aa10.05□□□□□ -0.8
ACTB-208ENST00000464611 COL5A3P25940 1745 aaPredicted RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 VPS37CA5D8V6 355 aaPredicted RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 RNF113AO15541 343 aaKnown RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 KCNQ2O43526 872 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 PFKFB2O60825 505 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 KDM4AO75164 1064 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 GADD45BO75293 160 aaPredicted RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 HSP90B1P14625 803 aaKnown RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 FGD1P98174 961 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 TCIRG1Q13488 830 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 TOB2Q14106 344 aaPredicted RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 CCDC57Q2TAC2 916 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 GTF3C6Q969F1 213 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 ZNF512BQ96KM6 892 aaPredicted RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 AK7Q96M32 723 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 ZNF396Q96N95 335 aaPredicted RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 ISCA1Q9BUE6 129 aa10.04□□□□□ -0.8
ACTB-208ENST00000464611 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
ACTB-208ENST00000464611 PLSCR1O15162 318 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 APBA3O96018 575 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 IFIT1P09914 478 aaKnown RBP10.03□□□□□ -0.8
ACTB-208ENST00000464611 EVCP57679 992 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 DNM1Q05193 864 aaKnown RBP10.03□□□□□ -0.8
ACTB-208ENST00000464611 MAP3K11Q16584 847 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 ATG9AQ7Z3C6 839 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 MTERF4Q7Z6M4 381 aaKnown RBP10.03□□□□□ -0.8
ACTB-208ENST00000464611 SMARCC2Q8TAQ2 1214 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 MAP7D2Q96T17 732 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 TLR7Q9NYK1 1049 aaKnown RBP10.03□□□□□ -0.8
ACTB-208ENST00000464611 CDHR2Q9BYE9 1310 aa10.03□□□□□ -0.8
ACTB-208ENST00000464611 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
ACTB-208ENST00000464611 ATP5J2-PTCD1G3V325 749 aa10.02□□□□□ -0.81
ACTB-208ENST00000464611 H3BQV1 296 aa10.02□□□□□ -0.81
ACTB-208ENST00000464611 FIBPO43427 364 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms